#genome
stringclasses 121
values | asm_name
stringclasses 120
values | assembly_accession
stringclasses 120
values | bioproject
stringclasses 45
values | biosample
stringclasses 120
values | wgs_master
float64 | seq_rel_date
stringclasses 98
values | submitter
stringclasses 76
values | ftp_path
stringclasses 120
values | img_id
float64 637M
2.51B
⌀ | gtdb_id
stringclasses 120
values | scope
stringclasses 3
values | assembly_level
stringclasses 1
value | genome_rep
stringclasses 1
value | refseq_category
stringclasses 3
values | release_type
stringclasses 2
values | taxid
float64 1.15k
681k
⌀ | species_taxid
float64 7
911k
⌀ | organism_name
stringclasses 120
values | infraspecific_name
stringclasses 112
values | isolate
stringclasses 1
value | superkingdom
stringclasses 2
values | phylum
stringclasses 18
values | class
stringclasses 30
values | order
stringclasses 56
values | family
stringclasses 75
values | genus
stringclasses 89
values | species
stringclasses 117
values | classified
bool 1
class | lv1_group
stringclasses 2
values | lv2_group
stringclasses 13
values | score_faa
float64 0.93
1
⌀ | score_fna
float64 0.88
1
⌀ | score_rrna
float64 0.1
1
⌀ | score_trna
float64 0.6
1
⌀ | total_length
float64 618k
9.12M
⌀ | contigs
float64 1
22
⌀ | gc
float64 22.5
72.2
⌀ | n50
float64 616k
9.03M
⌀ | l50
float64 1
1
⌀ | proteins
float64 525
7.92k
⌀ | protein_length
float64 172k
2.68M
⌀ | coding_density
float64 74
96.9
⌀ | completeness
float64 76.3
100
⌀ | contamination
float64 0
4.4
⌀ | strain_heterogeneity
float64 0
100
⌀ | markers
float64 124
383
⌀ | 5s_rrna
stringclasses 2
values | 16s_rrna
stringclasses 1
value | 23s_rrna
stringclasses 1
value | trnas
float64 14
20
⌀ | draft_quality
stringclasses 2
values | start_position
int64 0
10M
| human_label
int64 0
1
| autotrain_text
stringlengths 150
150
| autotrain_label
class label 121
classes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G000008165
|
ASM816v1
|
GCF_000008165.1
|
PRJNA58091
|
SAMN02598266
| null |
2004/06/24
|
DOE Joint Genome Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
| 637,000,015 |
RS_GCF_000008165.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 260,799 | 1,392 |
Bacillus anthracis str. Sterne
|
strain=Sterne
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus anthracis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 5,228,663 | 1 | 35.38 | 5,228,663 | 1 | 5,471 | 1,495,624 | 84.251844 | 99.23 | 0.15 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 286,650 | 0 |
AACAGATAAGCAACAACTACTCCGTATAAAGGGAATCCTATAACTAAAGTAGTATATAAGTTAACTTCAGTGAATAACTGGTGGAACCAAATAGTCGGAGTTGGCTGTTTTGTTTTTATATGTATATAAGAGGCTACTACGACTAAGAAA
| 6Bacillus anthracis str. Sterne ASM816v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,180,150 | 1 |
GATAAAGCAGCACAAATTATGAACAAATGGGAGACTTTAAAATTAATCCACCTTCTCAAATTAATGAGAATTAAGTTTGAGAAACAGAACACTGTATTTGCTCAAGGAATTCTAAGCTAAAATTTTGCTGATAAAAATGCTTGTTACTCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 995,550 | 1 |
CTGAACAAGCAGCATTTTCCTCCCAAGTCACACTGTCCTTCCTTTTTTATTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCCGTAGCGCGATCTCGGCTCACTGCAGGCTCTGCCTCCCAGGTTCAAGCAACTCTCCT
| 120homo sapiens
|
G000009905
|
ASM990v1
|
GCF_000009905.1
|
PRJNA224116
|
SAMD00061067
| null |
2004/09/02
|
Kitasato Institute for Life Sciences, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
| 637,000,306 |
RS_GCF_000009905.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 292,459 | 2,734 |
Symbiobacterium thermophilum IAM 14863
|
strain=IAM14863
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Clostridiales
|
Symbiobacteriaceae
|
Symbiobacterium
|
Symbiobacterium thermophilum
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 3,566,135 | 1 | 68.67 | 3,566,135 | 1 | 3,297 | 1,051,001 | 86.832243 | 98.02 | 0.03 | 0 | 347 |
yes
|
yes
|
yes
| 20 |
high
| 1,894,230 | 0 |
GGCACCAGGCGGAACCCATCCCCGCTGCAGGGCCGCTTTCTCCTCCGCCCGGTCCGGCACCCGGACCTCCCCGTCGGCCGTGACCTCGGTGCCCGGAATCAGCAGGGCGGCGCCGAGGGCGTGCCGGGCCGCCTGGTAGACGGCCGCCCG
| 99Symbiobacterium thermophilum IAM 14863 IAM14863
|
G000006605
|
ASM660v1
|
GCF_000006605.1
|
PRJNA224116
|
SAMEA3283089
| null |
2005/06/27
|
Bielefeld Univ
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1
| 637,000,085 |
RS_GCF_000006605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 306,537 | 38,289 |
Corynebacterium jeikeium K411
|
strain=K411 = NCTC 11915
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Corynebacteriales
|
Corynebacteriaceae
|
Corynebacterium
|
Corynebacterium jeikeium
| true |
Eubacteria
|
Actinobacteria
| 1 | 0.996 | 1 | 1 | 2,476,822 | 2 | 61.35 | 2,462,499 | 1 | 2,137 | 751,284 | 89.378688 | 100 | 0.68 | 0 | 319 |
yes
|
yes
|
yes
| 20 |
high
| 936,000 | 0 |
CGCCCGATCGGGGAAGCAGCGCAGGTCCTCTTCATTACGCTCGTAAGCTTCCTGCTGCTAGGCGTGCTCTGGGGCGTGATTCACCCGACCTCCGAACTAGTGGTGGCCACTGATGGCGGGGCAGACATGGCTCCGGGAACCGAGGATGCC
| 31Corynebacterium jeikeium K411 K411 = NCTC 11915
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,721,500 | 1 |
AAAAGTGCATACTTTTATGAGGCTATAAATGCATAAAGACGGATATATAAAATATATAAGTGTATATATAATTTTAGGGCTTTTTTAGTGGGGGAAAATCCACAAATGGATAATACTTTGGATATTTTCTGCAGCTCGCTTTTTTCCACC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,147,000 | 1 |
GATCTACTTCACTCGATCCCTCCACAGTCAGCAGGACAACTTTATTCCAGTCTGGGGGACGCCTTACCCGCAGGAGCTGCCAATCACTGCAGACGAAGATGCTCACGTAATCTTTGCAGTCGCGCCGTTCTGCCAGCGCCATGTAGCGGC
| 120homo sapiens
|
G000008765
|
ASM876v1
|
GCF_000008765.1
|
PRJNA57677
|
SAMN02603243
| null |
2002/11/22
|
Genome Therapeutics
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
| 637,000,076 |
RS_GCF_000008765.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,562 | 1,488 |
Clostridium acetobutylicum ATCC 824
|
strain=ATCC 824
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Clostridiales
|
Clostridiaceae
|
Clostridium
|
Clostridium acetobutylicum
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 0.1 | 0.9 | 4,132,880 | 2 | 30.93 | 3,940,880 | 1 | 3,896 | 1,211,240 | 86.343567 | 100 | 0 | 0 | 345 |
yes
|
yes
|
yes
| 19 |
high
| 154,440 | 0 |
AACGTTATCATAACGTGGTAATAAAAAATAAAATGATATAATAGGCTAAAATAGCAAAAAATCGCTAGATATTAAGATTGATGAAAAATTATGAAGATGATATAATGTAAACGTAATCAAGAATGATTGCACAAAGTAATTGTTTTAAAT
| 29Clostridium acetobutylicum ATCC 824
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,427,950 | 1 |
GAGGTGGTGTGTGGAAGGGATAACTTTGAAACTGTGTGTAAGTTATCATAGCCACCAGAGTTTCTTGATGGTGGCCTCCCGTTCCCGTGCAATGAGACAGCCTCCTGTCATCCCTTGTAAGATGGTGTTAATCTGACAAGAAAGGGAAGT
| 120homo sapiens
|
G000009825
|
ASM982v1
|
GCF_000009825.1
|
PRJNA224116
|
SAMD00061074
| null |
2004/12/30
|
Kao Corporation, Biological Science Laboratories, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
| 637,000,019 |
RS_GCF_000009825.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 66,692 | 79,880 |
Bacillus clausii KSM-K16
|
strain=KSM-K16
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus clausii
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 4,303,871 | 1 | 44.75 | 4,303,871 | 1 | 4,304 | 1,270,194 | 86.940919 | 98.67 | 0.33 | 0 | 373 |
yes
|
yes
|
yes
| 20 |
high
| 3,197,220 | 0 |
TGCCTCATATTCGTCAATGCTGTTTGCAATAAAGGATCTCTCCTTAGCAGACCACTTTGCGCTTTTTCTTCCCAACGTTTTGCCTCACTTTCCGTTAGCTGATCGCGCTCTTCATCAGTCAGCGGGTCATAGTCACGGTAGTATTTTTCG
| 8Bacillus clausii KSM-K16
|
G000009965
|
ASM996v1
|
GCF_000009965.1
|
PRJNA224116
|
SAMD00061071
| null |
2005/01/05
|
Kyoto University, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/965/GCF_000009965.1_ASM996v1
| 638,154,520 |
RS_GCF_000009965.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 69,014 | 311,400 |
Thermococcus kodakarensis KOD1
|
strain=KOD1
| null |
Archaea
|
Euryarchaeota
|
Thermococci
|
Thermococcales
|
Thermococcaceae
|
Thermococcus
|
Thermococcus kodakarensis
| true |
Archaea
|
Euryarchaeota
| 1 | 1 | 0.9 | 0.9 | 2,088,737 | 1 | 52 | 2,088,737 | 1 | 2,314 | 650,473 | 91.73242 | 100 | 0 | 0 | 190 |
no
|
yes
|
yes
| 19 |
medium
| 580,580 | 0 |
TTTCTATCTAGGACATATAATGGACAGGGAGTTTAAGGATACATTACAGAGACAATTCAAAAACGCAGTGGATAATTTTGCGATGTCTAATCTTCATACAAATAATAACGAACAATGGATATTTAGTGTCTGTAGCTTTTGTAAAGCCCA
| 102Thermococcus kodakarensis KOD1
|
G000007645
|
ASM764v1
|
GCF_000007645.1
|
PRJNA57861
|
SAMN02603126
| null |
2002/12/20
|
Chinese National HGC, Shanghai
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
| 637,000,281 |
RS_GCF_000007645.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 176,280 | 1,282 |
Staphylococcus epidermidis ATCC 12228
|
strain=ATCC 12228
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Staphylococcaceae
|
Staphylococcus
|
Staphylococcus epidermidis
| true |
Eubacteria
|
Firmicutes
| 1 | 0.977 | 0.9 | 1 | 2,564,615 | 7 | 32.05 | 2,499,279 | 1 | 2,354 | 721,937 | 82.93198 | 99.81 | 0 | 0 | 345 |
yes
|
yes
|
yes
| 20 |
high
| 1,684,020 | 0 |
TGATAACAGCTACGCCGCCAGCTAGTTTTGCCAAACGTTCCTGTAATTTTTCTTTATCAAACTCTGAATCAGTTTCTTCAATTTGTGCTTTAATTTGACCTACACGAGCATCAATATTATTTTCATCACCATTACCATCTACGACTGTTG
| 88Staphylococcus epidermidis ATCC 12228 ASM764v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 79,650 | 1 |
AAAAAGAGAACATCTATGTGTCCACCATACAGGATATGAAATAGAACATTTGCCGGCCATGGTGGCTCACACCTGTAATCCCAGTACTTTGGGAGGCCGAGGTGGGAGGATCACTTAAGCCCAGGACACAGGTTGCAGTGAGCCAAGATC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,795,800 | 1 |
TAGTCTTGTTACTTTCTGTCATCCAGTTGTCCAGCTACTGCTACTTTCTATAGCCTGCAATTCACTTTGGTTTTGTTGTTGTTGTTGTTTGTTTTGTTTTTTGTTGTTGTTGTTGTTTTGAGACAGTCTCGCTCTGTCACCCAGGCTGGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,523,150 | 1 |
CGGCTGAGGATGCAGGGCTCCCGGGCACGGTGCTAGCCCTGCCTTGAGACACCCCGAGAGCTGTGGGAAGAGCTGTGGGATCCCCTATTGCATCACAAAGCGGCCCTGGAGGGCTGGTCTTTATTTTGATGAGGCTGAGAAGGGAAGGCT
| 120homo sapiens
|
G000006175
|
ASM617v2
|
GCF_000006175.1
|
PRJNA224116
|
SAMN00000040
| null |
2010/06/03
|
US DOE Joint Genome Institute (JGI-PGF)
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
| 646,564,549 |
RS_GCF_000006175.1
|
Multispecies
|
Complete Genome
|
Full
|
representative genome
|
Major
| 456,320 | 2,188 |
Methanococcus voltae A3
|
strain=A3
| null |
Archaea
|
Euryarchaeota
|
Methanococci
|
Methanococcales
|
Methanococcaceae
|
Methanococcus
|
Methanococcus voltae
| true |
Archaea
|
Euryarchaeota
| 0.97 | 1 | 1 | 1 | 1,936,387 | 1 | 28.59 | 1,936,387 | 1 | 1,727 | 526,927 | 80.167033 | 99.05 | 0 | 0 | 165 |
no
|
yes
|
yes
| 19 |
medium
| 1,128,010 | 0 |
CTCTTGATACATATTCGTCTAAAGCTTTATCGCCCTCTTCTTCAAATTTCTTAGCCCATTTTTCATTTCCAAAGTCTTTTGCTCCACAAGCTATTAATTCTTTTACCCGGTGACTTTCAATAACGTGGGGATAACCCACCTTTAAATCAT
| 59Methanococcus voltae A3
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,180,550 | 1 |
AAAATGGATGGCAATCATTATCTTTTTTTATTGCAACAGAGTCCGCCCTCTGCCCTTCAGGGGAAATTCTTTTTCTTCTGTCTCCACCCCCTCAGGATCTTCAAGGGGGTGTAGGAGCCTTCAATGGGCTGATGCACAGAGCAACTGCCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,462,900 | 1 |
GATTGCTTGCACCCAGGAGGTCAAGGCTGCAGTGAGCCGAGATCCTGCCACTGCACTCCAGCCTGGGCCACAGAGTGAGACTGTCTCAAAAAAAAAAAAGTTAGATCCATGATCATTTTCCTGAAGAGATTCGAGGACAGCTTAGTGCTA
| 120homo sapiens
|
G000008765
|
ASM876v1
|
GCF_000008765.1
|
PRJNA57677
|
SAMN02603243
| null |
2002/11/22
|
Genome Therapeutics
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
| 637,000,076 |
RS_GCF_000008765.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,562 | 1,488 |
Clostridium acetobutylicum ATCC 824
|
strain=ATCC 824
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Clostridiales
|
Clostridiaceae
|
Clostridium
|
Clostridium acetobutylicum
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 0.1 | 0.9 | 4,132,880 | 2 | 30.93 | 3,940,880 | 1 | 3,896 | 1,211,240 | 86.343567 | 100 | 0 | 0 | 345 |
yes
|
yes
|
yes
| 19 |
high
| 1,231,750 | 0 |
TTGCATAACTCCATTTTCATTAAAATAATATTTATTTCCATTTACATCTTTTAAACCAGTAAGCATCATGCCGTTAGAATCAAAATAATGTTGAGAGGAAGAAGAATCCTTAAACCACCCAGTAAACATGGTACCATCAGAGTTAAAGTA
| 29Clostridium acetobutylicum ATCC 824
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,242,250 | 1 |
TTGTCCTATTTATTATTACTTATTGTTAATTGCTTACTGTGCCTAATATATAAATTAAACTTTATCATAGGCATGTAGTCTGTAGGAAAAAACAATATACATAGGGATGGGTACTATCTGAGGCTTCAGGCATCCGCTGGGGATCTTGGA
| 120homo sapiens
|
G000008605
|
ASM860v1
|
GCF_000008605.1
|
PRJNA224116
|
SAMN02604348
| null |
1999/12/22
|
US DOE Joint Genome Institute (JGI-PGF)
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/605/GCF_000008605.1_ASM860v1
| 637,000,328 |
GB_GCA_000008605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 243,276 | 160 |
Treponema pallidum subsp. pallidum str. Nichols
|
strain=Nichols
| null |
Bacteria
|
Spirochaetes
|
Spirochaetia
|
Spirochaetales
|
Spirochaetaceae
|
Treponema
|
Treponema pallidum
| true |
Eubacteria
|
Spirochaetes
| 0.99 | 1 | 1 | 1 | 1,138,011 | 1 | 52.78 | 1,138,011 | 1 | 1,009 | 357,124 | 92.473447 | 100 | 0 | 0 | 190 |
yes
|
yes
|
yes
| 20 |
high
| 879,060 | 0 |
TAAAGCAGGTCAATTCAATGTGCCTCTCGGACGCGCTGCACCTGCGTCTCCTTTTCTAAATACCACCGCGCCTACCCCTCGCAGTACACAGCCTGCGGCGCAGGTCGGACACCTTGCAATACGCATTGATGAGGAGAATTTACGCAGCTG
| 105Treponema pallidum subsp. pallidum str. Nichols ASM860v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,989,900 | 1 |
TCACTGCTGTATCACCTGGCAGAGTGTCAATGCTCTACCAATATTTCCAGAATGAAAGAATGAATGAATTTCAACTAGTGAGCTAAAATCAGAACTGAATGAGAAACTTGGTAAGTAGGAAGGAATCATTCTATCTTCATGTTCACACAG
| 120homo sapiens
|
G000010125
|
ASM1012v1
|
GCF_000010125.1
|
PRJNA224116
|
SAMD00061076
| null |
2005/08/12
|
Kitasato Institute for Life Sciences, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1
| 637,000,284 |
RS_GCF_000010125.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 342,451 | 29,385 |
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
|
strain=ATCC 15305
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Staphylococcaceae
|
Staphylococcus
|
Staphylococcus saprophyticus
| true |
Eubacteria
|
Firmicutes
| 1 | 0.992 | 1 | 1 | 2,577,899 | 3 | 33.19 | 2,516,575 | 1 | 2,502 | 730,892 | 83.519176 | 99.44 | 0 | 0 | 348 |
yes
|
yes
|
yes
| 20 |
high
| 2,277,990 | 0 |
TCTTGATAATGATAGTGCTCTTTGGTTAATATCAACCATTGTCACTTCGTGATGTGGGGAAACTTTTGCAATCATTAAACCGATAGGGCCATAGCCACAACCAACGTCTATAATTTTCTTCGTGGGACCAGGAGGATATGCTTTCAAAAA
| 90Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 ASM1012v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 701,700 | 1 |
CCTGGCTCACCTGCCTGTCACTCACGCACATCCCTGCCGAGAGTGGAACTGCTAAGGAGGTCAGCGGTGCCAGGCCGTGCAGATGACGGACTGCAAGTTCCGGGCACCCAGACCCAACCACGCCCTAGGCTCAGGTGCTAGACTAAGCGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,821,500 | 1 |
TTGCACAACTCTGTGCAAATACAAAAAAAAAAAATCAACAACTTGTACACTTTATTTTTGTTTTTGAGACAGGGTCTCACTTTGTCACCCAGGCTGGAGTACAGTGATGTGATCTCAGCTCATCGCAGCCTCAACCTCCCCAGGCTCAGG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,241,850 | 1 |
CTGAGCTACAGGCTTATCGTCTGCCAAATTACCAGATGTTTCCAGGAAGACAGCTCTTATTTCCCTGTAGTTCCAGGAAATGTCTCATCTCTTATTGGCCCATCTTGAGTCACGTGTCTAATCTCTTGAATAAGGGGACATGGTCCTCTC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,071,050 | 1 |
GCCCCCCCTCCAGGAACCCCGGGCGCTTCTGCCCTGCACGGCCAGCGCTCTCCACCATCCCCACGGGGCCTTCGGACTTCCCCATCAGCAGGGCTCTGGACGGGAGAGCACCGCGGAGGAACCTGCAGGCCCAGGGCAGGGGAGAGGGGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,909,050 | 1 |
GCAAAGTTGATCAGGAAAGGAAATGTAATCATAGAACTACTTTGTGGCTCAGCTGTGAATAATAATTACATAATTATGTAAATGTTGAATATTGATCTAACCACAAATTATGATACTGGGAGGAGCGGGGCAGGGAGCTGCACGTGTGTG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,535,450 | 1 |
TCAACTTCCTGTAATGGGAGGAACTCTGACACACTTCACAAAAGGGTGTCAAATTAGTTTTAAAGGGAAAAAGAACTGCAGCATGATCTGGAATTCGCTTTCTGCCCTGCGGTTCCACTGTGAAGGCAACACGCCTTCGAGGAGTTGGGG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,679,500 | 1 |
TCGCAACTCACGCCCAAGCTGCTCCGAGTGCCTAGCTTGGTGGGGAAAGGTGTGGAGTCACCACCTCCACTCTGCTCCTTCTCCAGGTGTCTGTCTGTCTTTGCTGCTGTCTTGGTGACTGTCCTCTGCCCCCCTGGCCTGGGCCTGACC
| 120homo sapiens
|
G000009705
|
ASM970v1
|
GCF_000009705.1
|
PRJNA224116
|
SAMD00061094
| null |
2004/05/11
|
Kazusa
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
| 637,000,199 |
RS_GCF_000009705.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 103,690 | 103,690 |
Nostoc sp. PCC 7120
| null | null |
Bacteria
|
Cyanobacteria
| null |
Nostocales
|
Nostocaceae
|
Nostoc
|
Nostoc sp. PCC 7120
| true |
Eubacteria
|
Cyanobacteria
| 1 | 0.992 | 0.9 | 1 | 7,211,789 | 7 | 41.27 | 6,413,771 | 1 | 6,159 | 2,024,679 | 82.716938 | 99.19 | 0 | 0 | 360 |
yes
|
yes
|
yes
| 20 |
high
| 622,180 | 0 |
CACGTTTTGGGCAATGATTACATACTGGCATCAGAACGCCTTGTAAGTGCAGAGTCTCTATTGAGAGATGGCAATCTGACAGTGCGTGAATTTGTGCGTAGCGTTGCTAAATCAGAACTCTACAAAAAGAAATTTTTCTACAACAGCTTC
| 70Nostoc sp. PCC 7120 ASM970v1
|
G000011065
|
ASM1106v1
|
GCF_000011065.1
|
PRJNA62913
|
SAMN02604314
| null |
2003/03/28
|
Washington University Department of Molecular Biology and Pharmacology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
| 637,000,026 |
RS_GCF_000011065.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 226,186 | 818 |
Bacteroides thetaiotaomicron VPI-5482
|
strain=VPI-5482
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides thetaiotaomicron
| true |
Eubacteria
|
Bacteroidetes
| 1 | 0.998 | 0.7 | 1 | 6,293,399 | 2 | 42.86 | 6,260,361 | 1 | 4,944 | 1,919,297 | 89.876027 | 99.41 | 0.4 | 0 | 348 |
yes
|
yes
|
yes
| 20 |
high
| 2,086,890 | 0 |
TGTTGATTGTTTCAACTTCTTCTTCAGGAACTGAAGATGATCCGTGAAGTACGATAGGGAATCCCGGAAGTTTTTCCATTACAGCATCCAATACTTCGAAAGCCAATGGAGGAGGAACCATACGACCGGTAGCCGGATCGATGTGGCACT
| 11Bacteroides thetaiotaomicron VPI-5482
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,703,100 | 1 |
GCTCTGGATGCCGGAGCAGCAAACAAGACCCTTTCAGTTCCTGCTCCACTACATTCTAGAGATGAAAGGCAGACTGGCAAATAGCTAGATCTTGCAGGGTACAGTTACTTTAGACGAAAGGCAGAGGTATCTCTCCGTCGCTCAAAGTAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,472,100 | 1 |
TGAGCACAGCCGATGTGCCAGGCATCAGAGATGCACTGCGGTGAATACACACTATCCTCGAAAGAACCCTAGAACTTGGTATGACTGCTGTTGTTACTGGGAGAACACTATGCAAATGAGGAAAGTGGGGCTGCAAGTGGAATTAGAGCG
| 120homo sapiens
|
G000008345
|
ASM834v1
|
GCF_000008345.1
|
PRJNA224116
|
SAMN02603281
| null |
2004/07/30
|
Goettingen Genomics Laboratory
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
| 637,000,215 |
RS_GCF_000008345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 267,747 | 1,747 |
Propionibacterium acnes KPA171202
|
strain=KPA171202
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Propionibacteriales
|
Propionibacteriaceae
|
Cutibacterium
|
Cutibacterium acnes
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 2,560,265 | 1 | 60.01 | 2,560,265 | 1 | 2,373 | 780,330 | 89.799572 | 100 | 0 | 0 | 319 |
yes
|
yes
|
yes
| 20 |
high
| 699,660 | 0 |
TTGTTGCCTCGTTTCTCGGGAACTTCGTGGAGTGGTTCGACTATGCCACGTATTCATATTTGGCAGTGATAATCTCCAGAGTGTTCTTCCCCCAAGGAACAAGTAGGGACGCTCTTGTTCAGACATTCGCCATATTCGCCCTGTCCTTCC
| 77Propionibacterium acnes KPA171202
|
G000007805
|
ASM780v1
|
GCF_000007805.1
|
PRJNA57967
|
SAMN02604017
| null |
2003/03/05
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
| 2,508,501,074 |
RS_GCF_000007805.1
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 223,283 | 251,701 |
[Pseudomonas syringae] pv. tomato str. DC3000
|
strain=DC3000
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas syringae group genomosp. 3
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.997 | 0.9 | 1 | 6,538,260 | 3 | 58.34 | 6,397,126 | 1 | 5,862 | 1,948,843 | 87.825109 | 100 | 0.22 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 1,612,260 | 0 |
CAGCTCGGCGCTGAGCATCCCGCTGGATACTTTTATCTTCTTCGGCATGATCGACGCCCTGACAGCGCCTGTCGTCGTGACCGCGCTGGCCTCGAAGTTCGCCGGTGTGAGCATTGTGTGGATGATCATGGCCTGGCGTGCGCGCAACAA
| 119[Pseudomonas syringae] pv. tomato str. DC3000
|
G000009825
|
ASM982v1
|
GCF_000009825.1
|
PRJNA224116
|
SAMD00061074
| null |
2004/12/30
|
Kao Corporation, Biological Science Laboratories, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
| 637,000,019 |
RS_GCF_000009825.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 66,692 | 79,880 |
Bacillus clausii KSM-K16
|
strain=KSM-K16
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus clausii
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 4,303,871 | 1 | 44.75 | 4,303,871 | 1 | 4,304 | 1,270,194 | 86.940919 | 98.67 | 0.33 | 0 | 373 |
yes
|
yes
|
yes
| 20 |
high
| 340,210 | 0 |
GTGTATTTTGCGCATCGTTTTCCCTCCATCATGCAACTGCCCTGCAAAGCCGTTATCTTTTAGAAAGTACCACGATCAATTAAGGAAAACAATAATAGCTACAAGGATAGCTTGTATGAAATTTTATTTCGTAATAAATTAAAATTATAT
| 8Bacillus clausii KSM-K16
|
G000011065
|
ASM1106v1
|
GCF_000011065.1
|
PRJNA62913
|
SAMN02604314
| null |
2003/03/28
|
Washington University Department of Molecular Biology and Pharmacology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
| 637,000,026 |
RS_GCF_000011065.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 226,186 | 818 |
Bacteroides thetaiotaomicron VPI-5482
|
strain=VPI-5482
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides thetaiotaomicron
| true |
Eubacteria
|
Bacteroidetes
| 1 | 0.998 | 0.7 | 1 | 6,293,399 | 2 | 42.86 | 6,260,361 | 1 | 4,944 | 1,919,297 | 89.876027 | 99.41 | 0.4 | 0 | 348 |
yes
|
yes
|
yes
| 20 |
high
| 467,480 | 0 |
AGCGTATCAAGGCAAAGGGGGCTACTATTGTGATTTTCGAGCCCACTATGCAAGATGGTGAAACTTTCTTTGGAAGTCAAGTGATCAATAATCTGGTCGAGTTTAAGGAAATAAGTCAGGCCATAATTGCCAACCGTTACGATGCTTGTC
| 11Bacteroides thetaiotaomicron VPI-5482
|
G000008765
|
ASM876v1
|
GCF_000008765.1
|
PRJNA57677
|
SAMN02603243
| null |
2002/11/22
|
Genome Therapeutics
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
| 637,000,076 |
RS_GCF_000008765.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,562 | 1,488 |
Clostridium acetobutylicum ATCC 824
|
strain=ATCC 824
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Clostridiales
|
Clostridiaceae
|
Clostridium
|
Clostridium acetobutylicum
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 0.1 | 0.9 | 4,132,880 | 2 | 30.93 | 3,940,880 | 1 | 3,896 | 1,211,240 | 86.343567 | 100 | 0 | 0 | 345 |
yes
|
yes
|
yes
| 19 |
high
| 811,330 | 0 |
ATTTAGCAACAATTGCAAAAAAGTATCCTGATAAAAAATTTGCGATAATAGATGATGCATATGATAAGCAGCCTAAGAATATAATGTCATTAGTATTTAAAGAACAAGAAGGTTCATTTTTAATGGGTGTTATAGCAGGAAAGATGACAA
| 29Clostridium acetobutylicum ATCC 824
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,044,000 | 1 |
AGAGAGATCCTTTTGCATAGAAACAACTCATTTGGGAAATGCAAGCAGGGAGAGCCCTGTGCCCAGACTGCAGGGTAAGGCCCCAAGGGGCAGAGACCTGTGGCAGGGTGCTTCTGGCCAACCAGCCAAGGGGCATGAGCAGACAGTGGG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,872,750 | 1 |
TCCTCCTGCCTCAGCCTCCCGAGTAACTGGGACTACAGGCACGCACCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAATCTCTTGACCTCATGATCCGCCCGCCTCAGCC
| 120homo sapiens
|
G000006965
|
ASM696v1
|
GCF_000006965.1
|
PRJNA57603
|
SAMEA3283068
| null |
2003/05/06
|
MELILO
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
| 637,000,269 |
RS_GCF_000006965.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 266,834 | 382 |
Sinorhizobium meliloti 1021
|
strain=1021
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhizobiales
|
Rhizobiaceae
|
Sinorhizobium
|
Sinorhizobium meliloti
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.997 | 0.1 | 1 | 6,691,694 | 3 | 62.17 | 3,654,135 | 1 | 6,303 | 1,956,944 | 86.157242 | 99.28 | 0.31 | 0 | 373 |
yes
|
yes
|
yes
| 20 |
high
| 3,594,890 | 0 |
CGGCTTCAGATCGAGAAAATCGTCGCGCACGATGGAGGCGATGCCGGCATTGTTGACGAGGCAGTCGATCCGGCCGAATTCCGCGACGACCGCGTCGACGGTCGCCTGATGGCTCGAAAGGTCGGCAAGATCGGCGCGCAGGAAGATCAC
| 86Sinorhizobium meliloti 1021
|
G000007385
|
ASM738v1
|
GCF_000007385.1
|
PRJNA224116
|
SAMN02603680
| null |
2005/02/02
|
NIAB, Rural Development Administration
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
| 637,000,346 |
GB_GCA_000007385.1
|
Multiisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 291,331 | 347 |
Xanthomonas oryzae pv. oryzae KACC 10331
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xanthomonas
|
Xanthomonas oryzae
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 4,941,439 | 1 | 63.69 | 4,941,439 | 1 | 4,831 | 1,427,680 | 85.113992 | 99.82 | 0 | 0 | 355 |
yes
|
yes
|
yes
| 20 |
high
| 733,850 | 0 |
CTGGGCGATGTGGCCTACCGCGAAGGCTATCTGCGCTCGCATTCGGACGTGGCGCTGATCACCGTGATCGCCTTGCTGGTGCTGGTGCAGGTGCTGCAGATGCTGGGAGACCGCCTGGTGGCGTACTACAGCCGGCGGTGAGCGGCGCTG
| 113Xanthomonas oryzae pv. oryzae KACC 10331
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,604,400 | 1 |
ATAGAAACTATAGACACCGGGAACTCCAAAAAAGGGAAGAGGGAAAGGGCTGAAAAACTACCTATTGGGTGGTGCTATGTTCATTATATGGGTGACAGGTTTTCAATAGAAGCCCAATGCTTAGCATCATGCAATATACCCTTGTAACAG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,491,900 | 1 |
GTGTGAGTCCCCGAGGTGTTCCCGCTTTTCCGTCATCTCGGAGGGACCTGCCTATGCTGACTGGTGGGTCATCAAGATTAATAAAGACAAAGGCTTTGGCGGATGCTCAGCTCAGGAAAAGCACCTGGAGCTGCTCTTTCCTGACTGATT
| 120homo sapiens
|
G000007805
|
ASM780v1
|
GCF_000007805.1
|
PRJNA57967
|
SAMN02604017
| null |
2003/03/05
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
| 2,508,501,074 |
RS_GCF_000007805.1
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 223,283 | 251,701 |
[Pseudomonas syringae] pv. tomato str. DC3000
|
strain=DC3000
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas syringae group genomosp. 3
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.997 | 0.9 | 1 | 6,538,260 | 3 | 58.34 | 6,397,126 | 1 | 5,862 | 1,948,843 | 87.825109 | 100 | 0.22 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 556,920 | 0 |
TGCCAGGGTGCAGACGCATGATCGGCGGAGGCGGCAGGAAGCGCAGCAAACCCGGACGGTGTTTCGCCCCACGGCTGCCAGAACCCGGCGCGGTCGGTCAGGCAATACAAGCGACTCCGGGCATCAAAACGAGGTTGCTGCAGGGATTCT
| 119[Pseudomonas syringae] pv. tomato str. DC3000
|
G000006865
|
ASM686v1
|
GCF_000006865.1
|
PRJNA57671
|
SAMN02603339
| null |
2001/03/21
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
| 637,000,144 |
RS_GCF_000006865.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,623 | 1,358 |
Lactococcus lactis subsp. lactis Il1403
|
strain=IL1403
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Lactococcus
|
Lactococcus lactis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 2,365,589 | 1 | 35.33 | 2,365,589 | 1 | 2,383 | 693,662 | 86.378488 | 100 | 0 | 0 | 310 |
yes
|
yes
|
yes
| 20 |
high
| 198,120 | 0 |
TAAAATGTCATGCACCAGGTTGTCATCAAATTGGACTTCATCGCACAGCTGACGGACTTTATGTTCTTTGTCGAAAACATCATCCAGATGTACCTAATAACCTAACGCTCAAACACATTCAAAAATCACACGTCAATGCAAAAGCGAAAA
| 54Lactococcus lactis subsp. lactis Il1403 IL1403
|
G000008185
|
ASM818v1
|
GCF_000008185.1
|
PRJNA57583
|
SAMN02603967
| null |
2004/02/03
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
| 637,000,327 |
RS_GCF_000008185.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,275 | 158 |
Treponema denticola ATCC 35405
|
strain=ATCC 35405
| null |
Bacteria
|
Spirochaetes
|
Spirochaetia
|
Spirochaetales
|
Spirochaetaceae
|
Treponema
|
Treponema denticola
| true |
Eubacteria
|
Spirochaetes
| 1 | 1 | 1 | 1 | 2,843,201 | 1 | 37.87 | 2,843,201 | 1 | 2,578 | 885,778 | 91.799314 | 100 | 0 | 0 | 281 |
yes
|
yes
|
yes
| 20 |
high
| 2,311,400 | 0 |
GGATTCAGGTGTACACGCAGCCCGCCAGGCCGTAAACTTTTTTTGCGATATAAAAAGCATGAGGGCCTCAAATTTTTTACCGGCACTTAACTCAATCCTGCCTAAGGATATAAGGGTGATGGATGCAGCTGAAGTGTCCCCCCTCCTGCA
| 104Treponema denticola ATCC 35405
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,544,950 | 1 |
GTCATGCAGCCACACCCTGCCCCATCCTAACCCCCCAAAATCACTCATCTCTGCTCTGCCACCATGGGTTGGTCTTTTTGAGAATGTCAGATGCAGGCTGGCTTCTTTCCCTCAGCCTGACACCCGTGAGAGCCGTCTGAGTTGGTGTAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,933,350 | 1 |
ACCTCCAGCTGCGCAAGGCATGTGCATTATCTTCAGCACCTGTCACTTTCACAGGGACATGAGCCATTGAAGGATTGATTTGGAAACCAAAATCAGCTTGGGGAAAGGGCAATTAAACTGTGGATGACGGTTTGTTGCATGTTTTCTTGC
| 120homo sapiens
|
G000007345
|
ASM734v1
|
GCF_000007345.1
|
PRJNA224116
|
SAMN03081414
| null |
2002/04/03
|
Broad Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
| 638,154,508 |
RS_GCF_000007345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 188,937 | 2,214 |
Methanosarcina acetivorans C2A
|
strain=C2A
| null |
Archaea
|
Euryarchaeota
|
Methanomicrobia
|
Methanosarcinales
|
Methanosarcinaceae
|
Methanosarcina
|
Methanosarcina acetivorans
| true |
Archaea
|
Euryarchaeota
| 0.98 | 1 | 0.8 | 0.9 | 5,751,492 | 1 | 42.68 | 5,751,492 | 1 | 4,884 | 1,470,904 | 75.340086 | 99.84 | 0.03 | 0 | 229 |
no
|
yes
|
yes
| 18 |
medium
| 248,950 | 0 |
CCGGGCAAAAGTCCTGGAAATAGGTTTGTTGTCCTGAGACTAATCGTCCTGTATCTATGTTATTCTGATGCCTATATCAGTCCAATGTCTACGTCAGTTTGATGTCTATGCCAGTTTGATCTTTATGTAATAATCCGTGTATTTGCTATA
| 61Methanosarcina acetivorans C2A
|
G000010405
|
ASM1040v1
|
GCF_000010405.1
|
PRJNA224116
|
SAMD00060908
| null |
2007/05/08
|
Japan Agency for Maine-Earth Science and Technology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/405/GCF_000010405.1_ASM1040v1
| 640,427,107 |
RS_GCF_000010405.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 412,965 | 410,330 |
Candidatus Vesicomyosocius okutanii HA
|
strain=HA
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
| null | null | null |
Calyptogena okutanii thioautotrophic gill symbiont
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 1 | 1 | 1,022,154 | 1 | 31.59 | 1,022,154 | 1 | 976 | 297,702 | 85.803803 | 93.54 | 0 | 0 | 271 |
yes
|
yes
|
yes
| 20 |
high
| 592,670 | 0 |
AATTTTTCACTTCTGTCGGTTATATAATCAGCATCAAAAATAAGAGTTTGTTTTGGTAAATATTGCAAAACTAATTCACGCAATACACAAATATCATTTTTTTTAAATGCTGACAATGGAAATAAATCTGTTGGTTGATATTTTTGAAAA
| 20Candidatus Vesicomyosocius okutanii HA
|
G000009765
|
ASM976v2
|
GCF_000009765.2
|
PRJNA224116
|
SAMD00061088
| null |
2016/03/24
|
NITE
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
| 637,000,304 |
RS_GCF_000009765.2
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Minor
| 227,882 | 33,903 |
Streptomyces avermitilis MA-4680 = NBRC 14893
|
strain=MA-4680
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces avermitilis
| true |
Eubacteria
|
Actinobacteria
| 1 | 0.999 | 1 | 1 | 9,119,895 | 2 | 70.7 | 9,025,608 | 1 | 7,915 | 2,675,970 | 86.456522 | 99.89 | 0.79 | 0 | 356 |
yes
|
yes
|
yes
| 20 |
high
| 1,138,280 | 0 |
CGGCGCGCTCGTCTCCGTCGCCGCCACGCCGGATGAGCTCCTGCCCCGAATCGCTCCGTGGACCGAGGACAACCCGGCGCGGCTCGCCGTCGCAGCCGTCAACGGACCCCGGAGCACAGTCGTTTCCGGTGCCCGCGAGGCCGTCGCGGA
| 95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,646,100 | 1 |
TTCTCTATCCAAGTATCCAAGGAGCATTGGCCCAGCAGTGAGGGGAAGATGCTGTTTTGAATAGGAGCAAGTTCAAGTGCCAAGTTCAGCAAGGCTGAGGATTGAGCACCAGTTTCTGCTCTATCAGTGTTCTGGCAAGTGCAGTGTCAG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,853,700 | 1 |
CTACCTGCTCTCTGTTTATTCACAGAGTTGTTGGGAGAAGGCAGGGAGGAAATGCACGTAAAGCTACTTTGAGAAAGATAAGGGGCTCTAGCTGAATGAGTGTTTGTCTCGTCCTGTCCATCTCATGGAAGTCCATCAGCTGCAAGTCAA
| 120homo sapiens
|
G000006745
|
ASM674v1
|
GCF_000006745.1
|
PRJNA57623
|
SAMN02603969
| null |
2001/01/09
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1
| 637,000,333 |
RS_GCF_000006745.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,277 | 666 |
Vibrio cholerae O1 biovar El Tor str. N16961
|
strain=N16961
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Vibrionales
|
Vibrionaceae
|
Vibrio
|
Vibrio cholerae
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.998 | 0.9 | 1 | 4,033,464 | 2 | 47.49 | 2,961,149 | 1 | 3,594 | 1,184,587 | 86.533164 | 99.86 | 0.03 | 0 | 360 |
yes
|
yes
|
yes
| 20 |
high
| 36,010 | 0 |
ACTTGAAGCTGCAGCGGTGTTTGCTACGCTCGTTCACCCCAATCACATAGTTTGCCTATGCTCATGGGGATTCACTTACTTGCCGCCTACCTGCAACTCCAAGTTGTTTGGGTATATCAGCAGAATTATTTGTCAGCAGAATTATTTGAT
| 107Vibrio cholerae O1 biovar El Tor str. N16961
|
G000011025
|
ASM1102v1
|
GCF_000011025.1
|
PRJNA224116
|
SAMD00060968
| null |
2010/01/05
|
Department of Bacteriology, Osaka Dental University
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
| 646,311,951 |
RS_GCF_000011025.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 680,646 | 43,675 |
Rothia mucilaginosa DY-18
|
strain=DY-18
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Micrococcales
|
Micrococcaceae
|
Rothia
|
Rothia mucilaginosa
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 2,264,603 | 1 | 59.62 | 2,264,603 | 1 | 1,722 | 637,843 | 83.000906 | 99.33 | 0 | 0 | 293 |
yes
|
yes
|
yes
| 20 |
high
| 844,350 | 0 |
TGGTGCGTTACGGCGGGTTCCTCTGGGTGTACCATTCCTTCTCCCACGTGGTTGCCGACGGGTTCGCCGCGTTTAACGGCCTATCCCGCGTGGCGGCGATATACCGTGCCCTGTTCGCCGGTCAGCCGGTTCCGGCAACCCGCCGCATGA
| 84Rothia mucilaginosa DY-18
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,098,950 | 1 |
CAACAAAATGAAATTTTAAAAATGAAATTAGATAGGAAATATCTTGTAATATTTCAAGCCTCTACCCTATTTAACATAAGACTCTAAGAATGCCCGGGCACCGTGGCGCATGCCTGGAATCCCAGCACTTTGGGAGGCAGAGGCAGGTGG
| 120homo sapiens
|
G000010345
|
ASM1034v1
|
GCF_000010345.1
|
PRJNA224116
|
SAMD00060915
| null |
2007/07/11
|
Japan Agency for Marine-Earth Science and Technology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
| 640,753,056 |
RS_GCF_000010345.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 387,093 | 387,093 |
Sulfurovum sp. NBC37-1
|
strain=NBC37-1
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
| null | null |
Sulfurovum
|
Sulfurovum sp. NBC37-1
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 2,562,277 | 1 | 43.87 | 2,562,277 | 1 | 2,552 | 795,482 | 91.463999 | 99.59 | 0.61 | 0 | 334 |
yes
|
yes
|
yes
| 20 |
high
| 646,100 | 0 |
TGGAACCGAAACTGTACGTTCCCCAGCCTACGAAACCCGCACCTATAAATGCGATGGTTGCTACCCATATGGTCCATACGAGATATTTATTGTGTTTTTGCATCCAGCTAATCATACTTCATCTACCTTCTATCGAAAAATTTGTATAAT
| 98Sulfurovum sp. NBC37-1 ASM1034v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,864,900 | 1 |
GTTTCTCCATGTTGGCCAGGCTGGCCTCAAACCCCTGACCTCAGGTGATCCGCCTACCTCTGCCTTCCAAAGTGCTGGGATTATAGACGTGAGCCACTGTGCCTAGCCAGGAGTATTTTTTTTTATTGTGGCCACATGTTATACCTTTTT
| 120homo sapiens
|
G000010565
|
ASM1056v1
|
GCA_000010565.1
|
PRJDA19023
|
SAMD00060921
| null |
2007/05/07
|
Marine Biotechnology Institute Co., Ltd
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
| 640,427,128 |
GB_GCA_000010565.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 370,438 | 110,500 |
Pelotomaculum thermopropionicum SI
|
strain=SI
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Clostridiales
|
Peptococcaceae
|
Pelotomaculum
|
Pelotomaculum thermopropionicum
| true |
Eubacteria
|
Firmicutes
| 0.98 | 1 | 1 | 1 | 3,025,375 | 1 | 52.96 | 3,025,375 | 1 | 3,001 | 887,464 | 86.415667 | 100 | 0.63 | 0 | 331 |
yes
|
yes
|
yes
| 20 |
high
| 190,580 | 0 |
TTTTTTATACAAGCAGAAAATAGCTACTTGATGTAGAATAAACAACTGATAATGTAGAATAATTATAGATGTTGAATAACAATAGATTGAATAATTGACCAATTTCACATCCTCCGCCTACGGCCAGGTCCGGTTACGGCGGCTCATTTT
| 73Pelotomaculum thermopropionicum SI
|
G000010665
|
ASM1066v1
|
GCF_000010665.1
|
PRJNA224116
|
SAMD00060954
| null |
2009/06/11
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
| 644,736,352 |
RS_GCF_000010665.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 573,370 | 184,917 |
Desulfovibrio magneticus RS-1
|
strain=RS-1
| null |
Bacteria
|
Proteobacteria
|
Deltaproteobacteria
|
Desulfovibrionales
|
Desulfovibrionaceae
|
Desulfovibrio
|
Desulfovibrio magneticus
| true |
Eubacteria
|
Proteobacteria
| 0.99 | 0.996 | 1 | 1 | 5,315,620 | 3 | 62.67 | 5,248,049 | 1 | 4,555 | 1,546,858 | 85.744052 | 100 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 4,545,450 | 0 |
CACCCTGCTCACCTTTCTCAAGTTCTGGCGCGAGGAGCGGCAAAAGCGTTTCCTGCACGGGGCCTTTTCGCGCTATGTGGCCCCGGCCGTGGTGGCCCGCATCGTGGCCCGGCCCAAAGACCTGCGCCTGACCGGCGAAGAGCGCGACGT
| 36Desulfovibrio magneticus RS-1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,999,500 | 1 |
TCCAAATCCAGGATCCGCATTCGAACCCTTGCTTCAGGCTCTGCTTTCCAGGTGATGCAAAGACTCATGTAAATGGTTTGATGGATGTTGCAGAGACAAATGCAAGTGCTCAGCCAGGTCTCCAGCTCAAGAAACATCTCAGGAAGGAGT
| 120homo sapiens
|
G000010085
|
ASM1008v1
|
GCF_000010085.1
|
PRJNA224116
|
SAMD00061079
| null |
2006/01/10
|
Kitasato Institute for Life Sciences, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
| 637,000,270 |
RS_GCF_000010085.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 343,509 | 63,612 |
Sodalis glossinidius str. 'morsitans'
|
strain=morsitans
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Pectobacteriaceae
|
Sodalis
|
Sodalis glossinidius
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.993 | 1 | 1 | 4,292,502 | 4 | 54.5 | 4,171,146 | 1 | 5,742 | 1,142,020 | 78.310831 | 100 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 2,094,950 | 0 |
GCTGCAAGATTTCGCGCCGAGTGAAATCCGGCGCATGCACCGCATCCAGTGCCTGTAGCGAAGGCAATAGCGCATCATCGCGGCGTTGGGAGAGTAAACAGTACAAATAGAGAGGGCCGCCGGCTTTGGGACCCGTTCCCGATAACCCTT
| 87Sodalis glossinidius str. 'morsitans' morsitans
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,231,250 | 1 |
TCACTTTACTAAGCAAATGAACAGTAGTGTCTGTGGCCAAAAATAATAAGACTTAAAATTTTGAGTCCTTCCAAAAGAACTTGTATTAAATCTTTGGAATAGAAAAAAAAAGTTCATATTAGGGAGTAGATCTGGGTATTGAAAGGCCTG
| 120homo sapiens
|
G000010165
|
ASM1016v1
|
GCF_000010165.1
|
PRJNA224116
|
SAMD00060942
| null |
2009/04/01
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
| 643,692,011 |
RS_GCF_000010165.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 358,681 | 1,393 |
Brevibacillus brevis NBRC 100599
|
strain=NBRC 100599 (= 47)
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Paenibacillaceae
|
Brevibacillus
|
Brevibacillus brevis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 6,296,436 | 1 | 47.27 | 6,296,436 | 1 | 5,917 | 1,875,522 | 87.757979 | 99.73 | 0.27 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 2,377,310 | 0 |
TCATCAGTTCTACCTTTGCTGCATCGGTTTTGGCTGGCTCACTTGCTTGTGGTGCGGTTTGTGTTGTCGAGCAAGCCGTTAGCATTAAGCAAAATACTGTCAATATGGCAAACCAGTGCTTCTTCATAAAAAAAGACCTCCATAATTATA
| 15Brevibacillus brevis NBRC 100599
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,207,150 | 1 |
AAGAAATATCCGTTTAATAGGTCAGGTTTGCATTGCCCTCCTGTCTAAATGTATGGCCAGGCTGTTGACCACCACCCACAAGGGGAGGGTGAACTGGCACCCAAAGCCCTGCACAGATACAGGGGGTTTTACCACTGTTCAAGTCTCCCA
| 120homo sapiens
|
G000009205
|
ASM920v1
|
GCF_000009205.1
|
PRJNA57679
|
SAMEA1705932
| null |
2006/09/20
|
Sanger Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
| 640,069,308 |
RS_GCF_000009205.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,563 | 1,496 |
Clostridioides difficile 630
|
strain=630
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Clostridiales
|
Peptostreptococcaceae
|
Clostridioides
|
Clostridioides difficile
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 0.9 | 1 | 4,298,133 | 2 | 29.06 | 4,290,252 | 1 | 3,829 | 1,209,268 | 82.891874 | 99.51 | 0.37 | 0 | 340 |
yes
|
yes
|
yes
| 20 |
high
| 2,560,870 | 0 |
CAATAATTGTTTTTGACCTTGAGAAACATTACTTGCTTCTTCATTTAATTTCATCTTATATCCATCTGGTAATGTCTTAATAAATCTATGAACATGTGCAGATTTAGCAGCCTCTATAACTTCTTCATCTGTAGCATTCAACTTACCATA
| 28Clostridioides difficile 630 ASM920v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,690,350 | 1 |
TGCAGACAGAGAAACAGGATTAGGACCAGGTAAGGTTTCTCTTGAGGAAGCTTGAGGTTGGGTATGTAGGCTGTCACGACAGGCCAAGAGTGAGACCAGTGACACCACAGTACTTCAAGCTCTCTGCAGATATTCTGTTCCGAAGCTGGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,762,300 | 1 |
GTATCTGTGGGCCCATATCAAGACAACAAAATGGATGCTGAGACAGCAGAGTAATATTAAGTCTCAATGTTGTTTCTTCTCTCTGTTTCTCTCAGTTAGGCTGGCTAGAGATTTTTGTGTATTGATCTTGTATCTGGCAACTTTGCTGAA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,766,900 | 1 |
AATCCCACAGGACACACATGTGCTCTTTAGTGGGGGAGGCAGTTCAGTGACGATGACAGCAGTAATGACAACACACAGAAAACATGAGGGTGTGCGAGCATGGGGTCCCAGGGACGACACCTGCGGGGTGCTGCCACGATGGTGCTGGGA
| 120homo sapiens
|
G000007705
|
ASM770v1
|
GCF_000007705.1
|
PRJNA224116
|
SAMN02603528
| null |
2003/08/22
|
LNCC, Brazil
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
| 637,000,074 |
RS_GCF_000007705.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 243,365 | 536 |
Chromobacterium violaceum ATCC 12472
|
strain=ATCC 12472
| null |
Bacteria
|
Proteobacteria
|
Betaproteobacteria
|
Neisseriales
|
Chromobacteriaceae
|
Chromobacterium
|
Chromobacterium violaceum
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 4,751,080 | 1 | 64.83 | 4,751,080 | 1 | 4,298 | 1,428,392 | 88.582238 | 99.04 | 0.45 | 0 | 372 |
yes
|
yes
|
yes
| 20 |
high
| 565,760 | 0 |
TGGATGTCCCAGGTGCGGCGGTTGGGCAGCTGGGTCAGCTCGTCGGTGCCTGCCAGGGCTTCCAGCTTTTGCATCAGGCTGCGCATTTGCCCCAGCCATTTGTGCAGCAGCCGCACCAGCAGGATGGCCATCGCGCTGGCGATGATCCAC
| 27Chromobacterium violaceum ATCC 12472
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,626,850 | 1 |
TTCCCAGTGAGCCCCTGAGCTTCTCCATAGAAGAGGTAGGGGCACCAAAAATGGAATTGTCTTAGAGTGCCAAGGGCAGCCGTCAGAACACCTGCAACATTAAAAGTCTGCAGCCACTACCCGCCAGTCATAACCCGAGACTGAAACTGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,078,400 | 1 |
GTAGCCATATGGTAATGATTCATAATCTTGCCAGTTAGCCAGCCCTCAAACACTGAGTATTGAGCAGAGCTGAAGAAAGGGTTTCCATAACCAGGTAAGGCCACCAGGATTGGCTCTGACTGGGTGGCACCCATTTGAAGTATTTTACAA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,284,200 | 1 |
CTTTTATGGATTATGCTTCTTGAAACAAAGTCTAAGAGCTCTTTGCCTGGCCCTATATCTCAAAGCTTTTGTCCTAGGTTTTTTCCTAAGTTTCATAGTTTACATCTAGGTTCATGATCCATTTTTAGCTAATTTTTGCATAAGGTGTGA
| 120homo sapiens
|
G000007565
|
ASM756v2
|
GCF_000007565.2
|
PRJNA57843
|
SAMN02603999
| null |
2016/02/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
| 637,000,222 |
RS_GCF_000007565.2
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 160,488 | 303 |
Pseudomonas putida KT2440
|
strain=KT2440
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas putida
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 6,181,873 | 1 | 61.52 | 6,181,873 | 1 | 5,584 | 1,861,131 | 88.706707 | 99.97 | 1.2 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 279,630 | 0 |
GTGCGCAAGGATGCTGCACAGCACCCAGTAGATGACCGCGACCGCCACGTACATGGTGAACACTTCGAACGTGCGCGCGGTAATCAGCTGGGCTTGGCGGAACAGCTCGGGCACCTGGATGGTCGCCGCCAGGGCGGTGTCCTTTACCAG
| 78Pseudomonas putida KT2440
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,262,000 | 1 |
ATCCTCAGCTTTCCTGGAAGTTCATCCATTTGTCCATTCAACACACAGACAGTGTGCGCGTCCTCTGTGCCCAGCTCTGCCAGCAGCTGGGGATGTTTCGTGAAGATGGGAGGATTCAGTCCTGTTGGGGAAACAGCAGTGAAAACCCAG
| 120homo sapiens
|
G000008345
|
ASM834v1
|
GCF_000008345.1
|
PRJNA224116
|
SAMN02603281
| null |
2004/07/30
|
Goettingen Genomics Laboratory
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
| 637,000,215 |
RS_GCF_000008345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 267,747 | 1,747 |
Propionibacterium acnes KPA171202
|
strain=KPA171202
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Propionibacteriales
|
Propionibacteriaceae
|
Cutibacterium
|
Cutibacterium acnes
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 2,560,265 | 1 | 60.01 | 2,560,265 | 1 | 2,373 | 780,330 | 89.799572 | 100 | 0 | 0 | 319 |
yes
|
yes
|
yes
| 20 |
high
| 71,240 | 0 |
CCGAGTAGGAGGCGATCGGGACGACGAAGATGCTCAACACCGGGAAAGGCACGAAGAAGAACTGGATCGCAGCCCCGATAGCGACCAAGGTCATCATGAGAAGAGGATGCTCGCGACGCATCGGCAGAGAGGCCACCATGACCATCGATG
| 77Propionibacterium acnes KPA171202
|
G000008505
|
ASM850v1
|
GCF_000008505.1
|
PRJNA58089
|
SAMN02598265
| null |
2004/12/27
|
DOE Joint Genome Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
| 637,000,023 |
RS_GCF_000008505.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 281,309 | 1,428 |
[Bacillus thuringiensis] serovar konkukian str. 97-27
|
strain=97-27
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus thuringiensis
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 1 | 1 | 5,314,794 | 2 | 35.37 | 5,237,682 | 1 | 5,361 | 1,516,528 | 84.049767 | 99.07 | 0.31 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 2,258,620 | 0 |
TTTCAATATCGATATAATGACAAAGACTCAAAGAGAAAGGATGATGAATTTTGCCAACAACAAGAAAGGAAAACCTCCAATTTGGTATGATGATGTGCCTTGGGATGGTTATCGTAATGACGTTTTACAATTTACTAATGAATGGATCAG
| 118[Bacillus thuringiensis] serovar konkukian str. 97-27
|
G000006965
|
ASM696v1
|
GCF_000006965.1
|
PRJNA57603
|
SAMEA3283068
| null |
2003/05/06
|
MELILO
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
| 637,000,269 |
RS_GCF_000006965.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 266,834 | 382 |
Sinorhizobium meliloti 1021
|
strain=1021
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhizobiales
|
Rhizobiaceae
|
Sinorhizobium
|
Sinorhizobium meliloti
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.997 | 0.1 | 1 | 6,691,694 | 3 | 62.17 | 3,654,135 | 1 | 6,303 | 1,956,944 | 86.157242 | 99.28 | 0.31 | 0 | 373 |
yes
|
yes
|
yes
| 20 |
high
| 6,569,940 | 0 |
GCCGAGCACCATGGCGAGAACCAGCGGCGCCAGCGGGTAGTCGAGCTTCTTGAACACATAGCCGAGGAGACCGAAGCCGATCACCATGAAGATGTCCGAGACGGAGTTCGCGACCTGGTAGGCCCCCGAGAAGATCACCGCGACGATGAT
| 86Sinorhizobium meliloti 1021
|
G000007565
|
ASM756v2
|
GCF_000007565.2
|
PRJNA57843
|
SAMN02603999
| null |
2016/02/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
| 637,000,222 |
RS_GCF_000007565.2
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 160,488 | 303 |
Pseudomonas putida KT2440
|
strain=KT2440
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas putida
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 6,181,873 | 1 | 61.52 | 6,181,873 | 1 | 5,584 | 1,861,131 | 88.706707 | 99.97 | 1.2 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 5,490,810 | 0 |
GACCTGGCTGCGGTACTGCAATTGCTTGACCTTGATAGCGTCATGCAAGCCCGGACTTATCGAACTGATCACTTTTTCATGGGTGAAATAATTGGCATCGAACTGCTGAGTGGCCTGGGCACTTGAAAGATTCAGCGGCTGCCACAGCCA
| 78Pseudomonas putida KT2440
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,992,000 | 1 |
AGGGTTTGGTTCAAAGGCCGATGGGAATTAACCATAGGAAAAATAGTCCAATTTTATTAATAGTTGGAACTTCAGGCAAATCTCACTTGAATCTACATTTTTCTTTTTTAATATTAAGGGCTAATTCTCACTATAGGTCACATTAAGAAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,284,150 | 1 |
TAATGTGCCTAGGTGTTGAGGGTTTTTTGTTTATATTTATGGTGCTTGGAGTCCTCTGAACTTCACAGACCTCTGGTTTGTTGTCTTTTACTAATGAAAAAATTCTCAACCATTAGCTCTTTGAATATTTCTTCTGCCCCATTTTCTTCC
| 120homo sapiens
|
G000008805
|
ASM880v1
|
GCF_000008805.1
|
PRJNA57817
|
SAMN02603997
| null |
2005/05/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/805/GCF_000008805.1_ASM880v1
| 637,000,189 |
RS_GCF_000008805.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 122,586 | 487 |
Neisseria meningitidis MC58
|
strain=MC58
| null |
Bacteria
|
Proteobacteria
|
Betaproteobacteria
|
Neisseriales
|
Neisseriaceae
|
Neisseria
|
Neisseria meningitidis
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 2,272,360 | 1 | 51.53 | 2,272,360 | 1 | 2,107 | 632,964 | 82.059313 | 99.75 | 1.9 | 80 | 322 |
yes
|
yes
|
yes
| 20 |
high
| 2,149,550 | 0 |
CGCCATCGGCTACGTCGGCCTGGCGGCAACCGTCTGGACAGGCATCATCCCCGCCATGCTGCTCTACCGTTCGCGCAAAAAATTCGGCGCAGGCAAAACCTATAAAGTTTACGGCGGCTTGTGGCTGATGGTTTGGGTCTTCCTTTTCGG
| 67Neisseria meningitidis MC58
|
G000007465
|
ASM746v2
|
GCF_000007465.2
|
PRJNA57947
|
SAMN02604090
| null |
2011/09/01
|
Univ. Oklahoma
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
| 637,000,288 |
RS_GCF_000007465.2
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 210,007 | 1,309 |
Streptococcus mutans UA159
|
strain=UA159
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Streptococcus
|
Streptococcus mutans
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 0.9 | 1 | 2,032,925 | 1 | 36.83 | 2,032,925 | 1 | 1,897 | 591,301 | 85.692487 | 100 | 0 | 0 | 308 |
yes
|
yes
|
yes
| 20 |
high
| 988,780 | 0 |
ATTTTCTTGCAACCATATCAGGCAAAATTTGACGGGTTAAATAAGTCAGACCAATGATATTAGTCGCAATCATGGTTTCCCAATCCTTGAAATTAGCCTCATAAGCCTTATCAAGACCTAAAGCCAGTCCTGCATTGTTAACAAGGAGTT
| 92Streptococcus mutans UA159
|
G000006865
|
ASM686v1
|
GCF_000006865.1
|
PRJNA57671
|
SAMN02603339
| null |
2001/03/21
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
| 637,000,144 |
RS_GCF_000006865.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,623 | 1,358 |
Lactococcus lactis subsp. lactis Il1403
|
strain=IL1403
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Lactococcus
|
Lactococcus lactis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 2,365,589 | 1 | 35.33 | 2,365,589 | 1 | 2,383 | 693,662 | 86.378488 | 100 | 0 | 0 | 310 |
yes
|
yes
|
yes
| 20 |
high
| 201,760 | 0 |
AAAATCCATAAACTTGGTGGAAAATTATTTGTCAATCCTGATGGATTGGAATGGAAAAGAACCAAGTGGGCAGCACCAATTCGTTCTTATTTGAAATTTGCTGAGAAAAAAATGGTGCGATATGCTGATTTGATTATTTCAGATAACGCA
| 54Lactococcus lactis subsp. lactis Il1403 IL1403
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,607,000 | 1 |
GGGATGTCAGTTGCTCCATCTACAAAAATAACAATTCAGTCCTCATGTGCAGGTGCTGGGAAAGATTCAATGAGGTACAACTGAATACACCGCCCTGGCTTTAAGGACATAGACTCATCCCAGCAACATCCACAGAGCCCCTGCTGGGGA
| 120homo sapiens
|
G000009705
|
ASM970v1
|
GCF_000009705.1
|
PRJNA224116
|
SAMD00061094
| null |
2004/05/11
|
Kazusa
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
| 637,000,199 |
RS_GCF_000009705.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 103,690 | 103,690 |
Nostoc sp. PCC 7120
| null | null |
Bacteria
|
Cyanobacteria
| null |
Nostocales
|
Nostocaceae
|
Nostoc
|
Nostoc sp. PCC 7120
| true |
Eubacteria
|
Cyanobacteria
| 1 | 0.992 | 0.9 | 1 | 7,211,789 | 7 | 41.27 | 6,413,771 | 1 | 6,159 | 2,024,679 | 82.716938 | 99.19 | 0 | 0 | 360 |
yes
|
yes
|
yes
| 20 |
high
| 3,619,590 | 0 |
ATTAAAATTTCTGTCAAAAGCTTCTTCATCTTGGGCTAAATACCAAACCCCTTCAATAGCACTAGCTACCTTAGGAATAGGTGTCCAAGAAAGTAAAACATACAACAACCCCCAAAGTGGCTGTCCTAAATAAAACTTATGTAATCCAGA
| 70Nostoc sp. PCC 7120 ASM970v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,252,650 | 1 |
TATGAGAGAACCCTAGAAACGTAGCCTGGGATGGTTGGTAAAGAACAGTCCATTCTGTGTCACAACAAAGAGTTTACATTTTATTTTGTATGTTCAGGAGGAGGGATTTATTTTACCTTATTTTTATTTATTTATTTTTTTGAGACAGAG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,477,500 | 1 |
TGCAGGTGTGTGCCACCACACCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGCATTGGCCAGGATGGTCTCAAACTCCTGAACTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGCTTACAGGCGTGAGTCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,803,700 | 1 |
TACTTACACAAACCCTGGAAGGTGTAAACTGCTCCACACCTAGACTGCGTTGTATAGCCTGTTGCTCCAAGGCTATAAACTTGTGTAGCATGCTACTGTACTGAATACTACAGGCAATTATAATAGGATGGTAAGTATTTGTATATCTAA
| 120homo sapiens
|
G000010605
|
ASM1060v1
|
GCF_000010605.1
|
PRJNA224116
|
SAMD00060929
| null |
2008/04/08
|
The University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
| 641,522,653 |
RS_GCF_000010605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 455,632 | 1,911 |
Streptomyces griseus subsp. griseus NBRC 13350
|
strain=NBRC 13350
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces griseus
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 8,545,929 | 1 | 72.23 | 8,545,929 | 1 | 7,113 | 2,547,362 | 87.837226 | 99.84 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 8,027,240 | 0 |
TCATCGAGGTGGTGCCCCTGCTGATCAGCTCCCTGGTCGCCGTCGCGGTCGCGGCGGTCGCCCTCGGTCTCGCGGACCTCCGGCTGGGCCTGCTGGTGATCGTGGGGACCGTCGCGATCCTGTCGGTCCTCGCCGTCATGTCCAAGCGGA
| 96Streptomyces griseus subsp. griseus NBRC 13350
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,637,400 | 1 |
TCCCATCTATCCATTCATGTATCATCCACCCATATATCCACCTATCTATCCCCCCTTTTGTCCATTTTTTATTAAATGTTATTCTGTGGACCAGAAATTGTGGTAGGCACACAGCAAGATGAGCAAGAAAGACACCATCTCTGCCCTCAG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,543,000 | 1 |
TGGTCTGGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGATGCTGAGGCAGGTGGATCATGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAGCCCCACCTCTACTAAAAATACAAAAAATTAGCTGGGCATGATG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,855,100 | 1 |
AGCATTGTTCTAGGCAGGGGGTTGCAGCTCGACCAAGACAGACTGCAGGGCGGTCATCAGCCATTATTGCCTCTTGGGCCGGGACTGTCCTCTGTGTCTGTGTCGCCTCCTCCATCCCAGCCAGATGGCTGAAAGCTCCCGGGGACTTTG
| 120homo sapiens
|
G000007565
|
ASM756v2
|
GCF_000007565.2
|
PRJNA57843
|
SAMN02603999
| null |
2016/02/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
| 637,000,222 |
RS_GCF_000007565.2
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 160,488 | 303 |
Pseudomonas putida KT2440
|
strain=KT2440
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas putida
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 6,181,873 | 1 | 61.52 | 6,181,873 | 1 | 5,584 | 1,861,131 | 88.706707 | 99.97 | 1.2 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 3,397,680 | 0 |
AGGCGGGAAGGGCATGAACATCACCGCCCCGTTCAAGCTGCGTGCCTTCGAGCTGGCCGACCGGCGCAGCGAGCGGGCGCAATTGGCACGGGCGGCCAATGCGCTGAAGTTCGAGGATGGCCGCATCGTCGCCGAAAACTTCGATGGCAT
| 78Pseudomonas putida KT2440
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,566,600 | 1 |
CGTAAGAGGAATCTCAAAGCACTCACTCATTTATTCAACCAGTACTGACAAACTGCACCTGCATGCCAGGCACTGTCCTACCACTCACTGAGTGTGCATTGGTGAACAAAATGGGTCTAACCCTTGCCTCTGTGAAACTTACAGTCTAAT
| 120homo sapiens
|
G000006605
|
ASM660v1
|
GCF_000006605.1
|
PRJNA224116
|
SAMEA3283089
| null |
2005/06/27
|
Bielefeld Univ
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1
| 637,000,085 |
RS_GCF_000006605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 306,537 | 38,289 |
Corynebacterium jeikeium K411
|
strain=K411 = NCTC 11915
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Corynebacteriales
|
Corynebacteriaceae
|
Corynebacterium
|
Corynebacterium jeikeium
| true |
Eubacteria
|
Actinobacteria
| 1 | 0.996 | 1 | 1 | 2,476,822 | 2 | 61.35 | 2,462,499 | 1 | 2,137 | 751,284 | 89.378688 | 100 | 0.68 | 0 | 319 |
yes
|
yes
|
yes
| 20 |
high
| 293,670 | 0 |
CCTCCCGCGGCGTGGACGTTTCCACCTTGGGTGCGAAGTGCCGCATGATCCTGCCGCTGATCGTCGGCATGGTGGACGATGCTGCCACCCGCGCCCGCCCGCTGCAGCGCACCGGCATCGGCGAGCCCGGCCCGCGTACCGTACTGCGCC
| 31Corynebacterium jeikeium K411 K411 = NCTC 11915
|
G000007565
|
ASM756v2
|
GCF_000007565.2
|
PRJNA57843
|
SAMN02603999
| null |
2016/02/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
| 637,000,222 |
RS_GCF_000007565.2
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 160,488 | 303 |
Pseudomonas putida KT2440
|
strain=KT2440
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas putida
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 6,181,873 | 1 | 61.52 | 6,181,873 | 1 | 5,584 | 1,861,131 | 88.706707 | 99.97 | 1.2 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 3,643,120 | 0 |
CCCGACATGGCGCGCGGCGCCGCCGCGCAGGCCAGTGAGGATGGCGCTGGCGTTACGGATCAGCCAGCTGTTGGTGTGATTCATGTTCGTCTCCATAGCCAGTACGGCGTTTCGCATGGAAGTCAGCCCAGTTCGCTTTCGTGCCAGTGG
| 78Pseudomonas putida KT2440
|
G000010525
|
ASM1052v1
|
GCF_000010525.1
|
PRJNA224116
|
SAMD00060925
| null |
2007/10/16
|
University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
| 641,228,476 |
RS_GCF_000010525.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 438,753 | 7 |
Azorhizobium caulinodans ORS 571
|
strain=ORS 571
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhizobiales
|
Xanthobacteraceae
|
Azorhizobium
|
Azorhizobium caulinodans
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 5,369,772 | 1 | 67.32 | 5,369,772 | 1 | 4,810 | 1,620,542 | 88.922714 | 100 | 0 | 0 | 358 |
yes
|
yes
|
yes
| 20 |
high
| 114,790 | 0 |
AGCCGCTCTCGCGGGTGGTGGGCATGGGCACCACTTCGCAGCCGGCGAGTTCCGCACCGGCGCGGTAGGCGGCATAGAGCGGGTTCGGCACGAGGACGATGGGCGCGCCCTTGCGCTCCGGCCCCCGGCGGCGGGCGATGAAGGTGGCGC
| 4Azorhizobium caulinodans ORS 571
|
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