#genome
stringclasses 121
values | asm_name
stringclasses 120
values | assembly_accession
stringclasses 120
values | bioproject
stringclasses 45
values | biosample
stringclasses 120
values | wgs_master
float64 | seq_rel_date
stringclasses 98
values | submitter
stringclasses 76
values | ftp_path
stringclasses 120
values | img_id
float64 637M
2.51B
⌀ | gtdb_id
stringclasses 120
values | scope
stringclasses 3
values | assembly_level
stringclasses 1
value | genome_rep
stringclasses 1
value | refseq_category
stringclasses 3
values | release_type
stringclasses 2
values | taxid
float64 1.15k
681k
⌀ | species_taxid
float64 7
911k
⌀ | organism_name
stringclasses 120
values | infraspecific_name
stringclasses 112
values | isolate
stringclasses 1
value | superkingdom
stringclasses 2
values | phylum
stringclasses 18
values | class
stringclasses 30
values | order
stringclasses 56
values | family
stringclasses 75
values | genus
stringclasses 89
values | species
stringclasses 117
values | classified
bool 1
class | lv1_group
stringclasses 2
values | lv2_group
stringclasses 13
values | score_faa
float64 0.93
1
⌀ | score_fna
float64 0.88
1
⌀ | score_rrna
float64 0.1
1
⌀ | score_trna
float64 0.6
1
⌀ | total_length
float64 618k
9.12M
⌀ | contigs
float64 1
22
⌀ | gc
float64 22.5
72.2
⌀ | n50
float64 616k
9.03M
⌀ | l50
float64 1
1
⌀ | proteins
float64 525
7.92k
⌀ | protein_length
float64 172k
2.68M
⌀ | coding_density
float64 74
96.9
⌀ | completeness
float64 76.3
100
⌀ | contamination
float64 0
4.4
⌀ | strain_heterogeneity
float64 0
100
⌀ | markers
float64 124
383
⌀ | 5s_rrna
stringclasses 2
values | 16s_rrna
stringclasses 1
value | 23s_rrna
stringclasses 1
value | trnas
float64 14
20
⌀ | draft_quality
stringclasses 2
values | start_position
int64 0
10M
| human_label
int64 0
1
| autotrain_text
stringlengths 150
150
| autotrain_label
class label 121
classes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G000010565
|
ASM1056v1
|
GCA_000010565.1
|
PRJDA19023
|
SAMD00060921
| null |
2007/05/07
|
Marine Biotechnology Institute Co., Ltd
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
| 640,427,128 |
GB_GCA_000010565.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 370,438 | 110,500 |
Pelotomaculum thermopropionicum SI
|
strain=SI
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Clostridiales
|
Peptococcaceae
|
Pelotomaculum
|
Pelotomaculum thermopropionicum
| true |
Eubacteria
|
Firmicutes
| 0.98 | 1 | 1 | 1 | 3,025,375 | 1 | 52.96 | 3,025,375 | 1 | 3,001 | 887,464 | 86.415667 | 100 | 0.63 | 0 | 331 |
yes
|
yes
|
yes
| 20 |
high
| 578,890 | 0 |
ATGCTGAAAAAGAAGAAACCTGCCCGAGTCCCAGCGCCGCATAGTGAAGTGGGAATTTACAGAAAAGTTTGTTATAGTAATCACATTCACAATTTGCTTTCCCAAGCAGTTGCTGCATAGCTCGAAAACCATACTCTTGGACCTTCTCCT
| 73Pelotomaculum thermopropionicum SI
|
G000009905
|
ASM990v1
|
GCF_000009905.1
|
PRJNA224116
|
SAMD00061067
| null |
2004/09/02
|
Kitasato Institute for Life Sciences, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
| 637,000,306 |
RS_GCF_000009905.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 292,459 | 2,734 |
Symbiobacterium thermophilum IAM 14863
|
strain=IAM14863
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Clostridiales
|
Symbiobacteriaceae
|
Symbiobacterium
|
Symbiobacterium thermophilum
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 3,566,135 | 1 | 68.67 | 3,566,135 | 1 | 3,297 | 1,051,001 | 86.832243 | 98.02 | 0.03 | 0 | 347 |
yes
|
yes
|
yes
| 20 |
high
| 3,312,140 | 0 |
GCTTCTCAGAGATCCAGTCGGAGGCGGAGCATGTCCCTGCACGGGATCCCGTTCTCGTAGATCGGCTCGGGATAATGCCGGGTGAAGTAGTCCGGGTCCACGCCCACGATCCGGAAGCCGCACTTCTGGTAAAGCGCCAGCTGGTCAACG
| 99Symbiobacterium thermophilum IAM 14863 IAM14863
|
G000010285
|
ASM1028v1
|
GCF_000010285.1
|
PRJNA224116
|
SAMD00060935
| null |
2008/04/17
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/285/GCF_000010285.1_ASM1028v1
| 642,555,133 |
RS_GCF_000010285.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 378,753 | 72,000 |
Kocuria rhizophila DC2201
|
strain=DC2201 (= NBRC 103217)
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Micrococcales
|
Micrococcaceae
|
Kocuria
|
Kocuria rhizophila
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 2,697,540 | 1 | 71.16 | 2,697,540 | 1 | 2,314 | 807,429 | 88.19847 | 98.68 | 0 | 0 | 324 |
yes
|
yes
|
yes
| 20 |
high
| 1,935,310 | 0 |
TCCGTGCGCTCCAGCCGGCGCAGCACACTCAGCCGCTGCCCCACGGTGTCCGAGCGCGGGGACAGCCGCTCGTGCGGCAGGGTCTCCCAGGACGGGAAGTTCGCGATCTGCTCACTCGGCAGGTAGGAGCCCAGCGCGGCCTGCAGCTCC
| 51Kocuria rhizophila DC2201
|
G000009365
|
ASM936v1
|
GCF_000009365.1
|
PRJNA224116
|
SAMEA3138202
| null |
2006/07/24
|
German Research Centre for Biotechnology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/365/GCF_000009365.1_ASM936v1
| 637,000,004 |
RS_GCF_000009365.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 393,595 | 59,754 |
Alcanivorax borkumensis SK2
|
strain=SK2
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Oceanospirillales
|
Alcanivoracaceae
|
Alcanivorax
|
Alcanivorax borkumensis
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 1 | 1 | 3,120,143 | 1 | 54.73 | 3,120,143 | 1 | 2,820 | 929,045 | 87.73194 | 100 | 0 | 0 | 352 |
yes
|
yes
|
yes
| 20 |
high
| 1,579,240 | 0 |
AACAGTTCGCGCAGGGTGACGGGCACCCGGTAGCGACGCAGATTTTCGAAAAAACCAATAAGCATAGTCTGCCCGTGGATCGGTTAGCTTTCGCGGCGATTCATGAACGCCAGACGCTCTAAGAGCTGCACATCCGCTTCGTTCTTCAGC
| 1Alcanivorax borkumensis SK2
|
G000005825
|
ASM582v2
|
GCF_000005825.2
|
PRJNA224116
|
SAMN02603086
| null |
2010/12/15
|
Center for Genomic Sciences, Allegheny-Singer Research Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
| 646,311,908 |
RS_GCF_000005825.2
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 398,511 | 79,885 |
Bacillus pseudofirmus OF4
|
strain=OF4
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus pseudofirmus
| true |
Eubacteria
|
Firmicutes
| 1 | 0.995 | 1 | 1 | 4,249,248 | 3 | 39.86 | 3,858,997 | 1 | 4,260 | 1,228,222 | 85.144124 | 98.68 | 1.32 | 0 | 377 |
yes
|
yes
|
yes
| 20 |
high
| 2,184,520 | 0 |
ACAATTGTAAATTTAGGGCGTCTGATTGAAAAGTTTGTCATTTGTGCGTTTTCTCCTTTGTTTATGCGCGATTTTCTATAAGTTAACAAGAAGACATACAATAAAACGTATATGTACTTGTACTTTTCATTTCGAATGAGTTAACTGTTT
| 9Bacillus pseudofirmus OF4
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 188,100 | 1 |
CAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTATATAGCAGTTTTAGGAGATCTGTTGGTGCCCAGCAAGAGCTCCAAACGGGCTATATGCAGGGATGCAGGCTGTAGTC
| 120homo sapiens
|
G000007605
|
ASM760v1
|
GCF_000007605.1
|
PRJNA224116
|
SAMN02603993
| null |
2003/04/14
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/605/GCF_000007605.1_ASM760v1
| 637,000,066 |
RS_GCF_000007605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 227,941 | 83,557 |
Chlamydophila caviae GPIC
| null |
GPIC
|
Bacteria
|
Chlamydiae
|
Chlamydiia
|
Chlamydiales
|
Chlamydiaceae
|
Chlamydia
|
Chlamydia caviae
| true |
Eubacteria
|
Chlamydiae
| 1 | 0.992 | 1 | 1 | 1,181,356 | 2 | 39.19 | 1,173,390 | 1 | 1,003 | 363,158 | 90.588188 | 99.49 | 0 | 0 | 220 |
yes
|
yes
|
yes
| 20 |
high
| 860,340 | 0 |
AGCCGAAATAGGACATCTCGAAGCACTTCCATCGGTTTCTGGTCAGCACTAATACGAGAAACCTTATGAATAGGATAGTGTTGAATGATAGCATCGATATCTTTTTGATATGATTGCAAACGCTTTTGCAATACTTCAATACCGACCTCG
| 23Chlamydophila caviae GPIC
|
G000008625
|
ASM862v1
|
GCF_000008625.1
|
PRJNA57765
|
SAMN02603207
| null |
1999/12/22
|
DIVERSA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/625/GCF_000008625.1_ASM862v1
| 637,000,010 |
RS_GCF_000008625.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 224,324 | 63,363 |
Aquifex aeolicus VF5
|
strain=VF5
| null |
Bacteria
|
Aquificae
|
Aquificae
|
Aquificales
|
Aquificaceae
|
Aquifex
|
Aquifex aeolicus
| true |
Eubacteria
|
Bacteria
| 1 | 0.994 | 0.9 | 1 | 1,590,791 | 2 | 43.3 | 1,551,335 | 1 | 1,776 | 514,666 | 95.304851 | 98.98 | 1.22 | 75 | 317 |
yes
|
yes
|
yes
| 20 |
high
| 860,600 | 0 |
GCAGGAAAGAGTACCGTGATTAAGGTAATGTGCGGTATAGAAAAGCCCGATGAGGGCTTTATGAAGTGTTGCGATGAGGTTTTCTTTGATACGAAAAAGGGAGTATTTCTACCTCCTCAAAAAAGAAGGCTCGGTGTTGTTTTCCAGAGT
| 2Aquifex aeolicus VF5
|
G000009305
|
ASM930v1
|
GCF_000009305.1
|
PRJNA224116
|
SAMEA3138199
| null |
2006/06/28
|
Penn State Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1
| 637,000,130 |
RS_GCF_000009305.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 382,638 | 212 |
Helicobacter acinonychis str. Sheeba
|
strain=Sheeba
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
|
Campylobacterales
|
Helicobacteraceae
|
Helicobacter
|
Helicobacter acinonychis
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.994 | 0.9 | 1 | 1,557,588 | 2 | 38.17 | 1,553,927 | 1 | 1,547 | 470,618 | 89.011857 | 99.12 | 0.7 | 100 | 271 |
yes
|
yes
|
yes
| 20 |
high
| 590,850 | 0 |
TGAACACATCAAAAAGGAAAAACTCAAGATGAATATTTTGCTTATGGGGGCTACTGGAGTGGGTAAAAGCTCGCTTATTACGCTCTATTTGGTAAATAAATTGCTAAAACAGGCAAAGGAAAGTCTATCACTCAGCATCTTGAAAAATAT
| 46Helicobacter acinonychis str. Sheeba
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,305,400 | 1 |
ACCTCCACATGAGCTCCACAAAGGCAGAGATTTTTGTCTGTTTTGTTCACTGCTGTATTCCCCGCACCTAGAATTAGTATCTGGTATGTCATAGGCACCCAATAATTATTTGTTGGATAGATGCATATGGTAAAAACATTTAAACCATAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,111,800 | 1 |
CCTAATGCATGTGGGGCTTAAAACCTAGATGATGGGTTGATAGGTGCTTCAAACCACCATGGAACTTGTATGCTTATGTAACAAACCTGTACGTTTGGCACATGTAAAATTAAAGTAAAATTTAAAAATTTTTACTTGTAAATTATTACA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,837,800 | 1 |
GTGGAGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACTTGAGGCCGGGAGTTCAAGACCAGCTTGGCCAACATGGTGAAACCCCGTCTCCACTAAAAATACAAAAATTAGCCAAGCATGGTGGTGTGCACC
| 120homo sapiens
|
G000007145
|
ASM714v1
|
GCF_000007145.1
|
PRJNA57887
|
SAMN02603845
| null |
2002/05/24
|
Sao Paulo state (Brazil) Consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
| 637,000,344 |
RS_GCF_000007145.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 190,485 | 339 |
Xanthomonas campestris pv. campestris str. ATCC 33913
|
strain=ATCC 33913
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xanthomonas
|
Xanthomonas campestris
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 5,076,188 | 1 | 65.07 | 5,076,188 | 1 | 4,292 | 1,472,146 | 85.453159 | 99.64 | 0 | 0 | 358 |
yes
|
yes
|
yes
| 20 |
high
| 1,917,500 | 0 |
GCTTTCTGCAACGGTGAGAAGGGCTTGAGTCGAAGGTGATCCGATCCCACTCTCTCCGCCAATCGTCTTGTGCGTTCGACCTCGACCGCCGCTAAGCCTCGAATAGTTAACTCCGAAGGCTCTCCTCCTGCTTCTCGACATCGCATTCGC
| 112Xanthomonas campestris pv. campestris str. ATCC 33913
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,393,050 | 1 |
GGAGTCTCACTCTGTTACCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCCGTGCCCCTGGTTCAAGCGATTCTCCTGCCTCAGTCTCCTAAGTAGCTGGGATTACAGGCGCTGCCCACCACGCCCGGCTAATTCTTGT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,311,700 | 1 |
TTCTTGACGAATGAGTGTGTAACACAAAACATTCTTTTGGGACATCTTTATTTCTGGAAAACCTAAGACATTCTTACTTGTGAAGACCAGAAAAAGAACACATGTTGTTAGGATTGGCACAGAATTCAGTGTGACAGTCAATCTTAATGC
| 120homo sapiens
|
G000006175
|
ASM617v2
|
GCF_000006175.1
|
PRJNA224116
|
SAMN00000040
| null |
2010/06/03
|
US DOE Joint Genome Institute (JGI-PGF)
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
| 646,564,549 |
RS_GCF_000006175.1
|
Multispecies
|
Complete Genome
|
Full
|
representative genome
|
Major
| 456,320 | 2,188 |
Methanococcus voltae A3
|
strain=A3
| null |
Archaea
|
Euryarchaeota
|
Methanococci
|
Methanococcales
|
Methanococcaceae
|
Methanococcus
|
Methanococcus voltae
| true |
Archaea
|
Euryarchaeota
| 0.97 | 1 | 1 | 1 | 1,936,387 | 1 | 28.59 | 1,936,387 | 1 | 1,727 | 526,927 | 80.167033 | 99.05 | 0 | 0 | 165 |
no
|
yes
|
yes
| 19 |
medium
| 1,014,000 | 0 |
CTTTTAAAAATCTTTTTAATACGATTACGTCATCAGTTATTTGACCATTCGTATTATTTTTTAAGTCTTCATTATAATTTGCATATCTTTTATACGCATTTAGTAAAAATTCGTTATGTAAAGGCGTTCTATCAACAGAGGATATTAATT
| 59Methanococcus voltae A3
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,324,550 | 1 |
CTGGAGCTGATGCCTGGGGGGCGAATCCTGGCTGCCTCTCCTCCCTCTGCCCCATGTCCAGGTGTTCTGAGGTCACCTGGGGCTTATTCTGCCAAAAGAGCATCTCGGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
| 120homo sapiens
|
G000010605
|
ASM1060v1
|
GCF_000010605.1
|
PRJNA224116
|
SAMD00060929
| null |
2008/04/08
|
The University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
| 641,522,653 |
RS_GCF_000010605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 455,632 | 1,911 |
Streptomyces griseus subsp. griseus NBRC 13350
|
strain=NBRC 13350
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces griseus
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 8,545,929 | 1 | 72.23 | 8,545,929 | 1 | 7,113 | 2,547,362 | 87.837226 | 99.84 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 5,952,830 | 0 |
CTTCCTGGTGCTGGCCCTGAGCGCCGTGCTCCACCTGGACCTGGTGACCGCGTCGGCCACCGCGAAGATCGTCAACGTGTGCACCAACGCGGGGGCGCTGGCCATGTTCGCGTACCAGGGCACCGTGCTGTGGCAGCTCGCGGCCGTGAT
| 96Streptomyces griseus subsp. griseus NBRC 13350
|
G000007905
|
ASM790v1
|
GCF_000007905.1
|
PRJNA224116
|
SAMN02604097
| null |
2003/06/26
|
Univ. Wuerzburg
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/905/GCF_000007905.1_ASM790v1
| 637,000,131 |
RS_GCF_000007905.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 235,279 | 32,025 |
Helicobacter hepaticus ATCC 51449
|
strain=ATCC 51449
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
|
Campylobacterales
|
Helicobacteraceae
|
Helicobacter
|
Helicobacter hepaticus
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 1,799,146 | 1 | 35.93 | 1,799,146 | 1 | 1,802 | 571,920 | 93.657102 | 99.94 | 0.35 | 0 | 303 |
yes
|
yes
|
yes
| 20 |
high
| 1,530,880 | 0 |
TGCTGTCCTTTTTTAATTTTAGTTTTAATCTTAAGACGTTTAGAGCTTGTATCCTCAAGCTTAAGAAGGAGATAAAAAAGTTCAAACTCGTTACATTCTTCTAATTTATCAATAGCACTCATTTCAGTAAGAATTTCATAGCCTAAAGAA
| 47Helicobacter hepaticus ATCC 51449
|
G000010425
|
ASM1042v1
|
GCF_000010425.1
|
PRJNA224116
|
SAMD00061080
| null |
2006/12/05
|
Gifu University, Life Science Research Center, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/425/GCF_000010425.1_ASM1042v1
| 639,633,010 |
RS_GCF_000010425.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 367,928 | 1,680 |
Bifidobacterium adolescentis ATCC 15703
|
strain=ATCC 15703
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Bifidobacteriales
|
Bifidobacteriaceae
|
Bifidobacterium
|
Bifidobacterium adolescentis
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 2,089,645 | 1 | 59.18 | 2,089,645 | 1 | 1,683 | 614,966 | 86.722338 | 100 | 0 | 0 | 284 |
yes
|
yes
|
yes
| 20 |
high
| 1,851,200 | 0 |
TGACCGTCAGGCCCTTGGATGCCACGTCCTTCACGAAGTACGGATACTTGTCGTAGCCTTCGGCCGCGTTCGGAATATCCAGCGTGATGGTGTAGGCGACGGTCTGCCCAATGCTCACGCCTTCAGTGGTGGTAATCGTATCGGCCGTCT
| 12Bifidobacterium adolescentis ATCC 15703
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,284,050 | 1 |
CTACCGCTATCTACTACAAACTTCAAAGAGGAACCAGGAGTATGGGAGGAACATGAAAGTGGACAAGGAACGTGACCATTGAAGCACCACAGGGAGGGGTTTAGACCTCTGGATGACTGTGGGCAGGCCTGGATGATATCCAGCCTTCCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,991,700 | 1 |
GAATCTGTACATTTATCCCAGAGGCGACTTCTACTGACATGAACTACTGAAATACATTTTTGAAATATCTCTTCCCTTCTAATAAAATGCTTGTCCTATTTCATTTACTAAAGGGTTTTAAAAATACATTTCTCTTTAGAGCTTGTTAAA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,722,050 | 1 |
TACCCACGAGCTGGGGTCTTTTCTACTCTTGGCAGCGAGGGGTGGCTGAAATCAGATGTGCCCTGGAGGCCAGGCCTCAGGACGCTCCTCCCCCAGGTGCACGCTCAGCGGACAAGGTGGACAACCCGAACCACGCTTGCTCAGAAATCC
| 120homo sapiens
|
G000006745
|
ASM674v1
|
GCF_000006745.1
|
PRJNA57623
|
SAMN02603969
| null |
2001/01/09
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1
| 637,000,333 |
RS_GCF_000006745.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,277 | 666 |
Vibrio cholerae O1 biovar El Tor str. N16961
|
strain=N16961
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Vibrionales
|
Vibrionaceae
|
Vibrio
|
Vibrio cholerae
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.998 | 0.9 | 1 | 4,033,464 | 2 | 47.49 | 2,961,149 | 1 | 3,594 | 1,184,587 | 86.533164 | 99.86 | 0.03 | 0 | 360 |
yes
|
yes
|
yes
| 20 |
high
| 707,980 | 0 |
AGCAGACGTTAAAACTAGCAGATATTTTAGCTTTGGGCTTTATGCTGTTCGCCTTCTTCTTAGGCGCAGGCAATATCATTTTTCCACCTCTCGCTGGCCAGTTGGCGGGTGAGAACATTACTCCTGCCATGTTCGGCTTTTTGCTGACCG
| 107Vibrio cholerae O1 biovar El Tor str. N16961
|
G000007865
|
ASM786v1
|
GCF_000007865.1
|
PRJNA224116
|
SAMN02604086
| null |
2004/01/30
|
Univ. Minnesota
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
| 637,000,168 |
RS_GCF_000007865.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 262,316 | 1,764 |
Mycobacterium avium subsp. paratuberculosis K-10
|
strain=K-10
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Corynebacteriales
|
Mycobacteriaceae
|
Mycobacterium
|
Mycobacterium avium
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 4,829,781 | 1 | 69.3 | 4,829,781 | 1 | 4,544 | 1,497,326 | 91.345322 | 99.28 | 0.33 | 0 | 336 |
yes
|
yes
|
yes
| 20 |
high
| 2,709,070 | 0 |
TGCGGTCAACCGCGGTGAGCTAACCGGCCGGAATCCGCCATTCGGCGGCCTCGTGCTGCTGCCGCCAGAATTCGGCGAAACGCCCGCCCGCGGCACGCAATTCGTCGACCGTTCCGTCCTCGACCACCCGTCCGTCGTCCAGGAACAGGA
| 65Mycobacterium avium subsp. paratuberculosis K-10
|
G000007525
|
ASM752v1
|
GCF_000007525.1
|
PRJNA57939
|
SAMN02603675
| null |
2005/01/21
|
Nestle Research Center, Switzerland
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
| 637,000,031 |
RS_GCF_000007525.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 206,672 | 216,816 |
Bifidobacterium longum NCC2705
|
strain=NCC2705
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Bifidobacteriales
|
Bifidobacteriaceae
|
Bifidobacterium
|
Bifidobacterium longum
| true |
Eubacteria
|
Actinobacteria
| 1 | 0.996 | 0.9 | 1 | 2,260,266 | 2 | 60.13 | 2,256,640 | 1 | 1,833 | 667,063 | 86.967994 | 100 | 0 | 0 | 289 |
yes
|
yes
|
yes
| 20 |
high
| 824,720 | 0 |
AGCTGGTGGCCCGCATAGCGGAATTGTATGGGCGCAGGCCCGAGGAAATCGACCCCGACTGGGGCCTGTGACAACACTGCGGGCCGTGTCACTTGTAATAAGGTAGTGGCACGGCCCGCAGCTATATCGCCGCCGAAACATCATCAGACT
| 13Bifidobacterium longum NCC2705
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,178,200 | 1 |
TCTCGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCAGGTGCCACCATGCCCAGCTAAGTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTCATGAGACCTATTTTTCTTTTAGGACCAGTCAA
| 120homo sapiens
|
G000008545
|
ASM854v1
|
GCF_000008545.1
|
PRJNA57723
|
SAMN02603986
| null |
2001/01/09
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1
| 637,000,321 |
RS_GCF_000008545.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,274 | 2,336 |
Thermotoga maritima MSB8
|
strain=MSB8
| null |
Bacteria
|
Thermotogae
|
Thermotogae
|
Thermotogales
|
Thermotogaceae
|
Thermotoga
|
Thermotoga maritima
| true |
Eubacteria
|
Bacteria
| 1 | 1 | 0.9 | 1 | 1,860,725 | 1 | 46.25 | 1,860,725 | 1 | 1,866 | 602,696 | 95.430706 | 100 | 1.79 | 100 | 312 |
yes
|
yes
|
yes
| 20 |
high
| 1,738,750 | 0 |
GTGGCGACATACTGAAAATGACCTACATAGCTAACTCAGGCCATCCTGGAGGATCCATGTCTTCGATCGATCTTTATCTTACCGTCTTCAAGTACGCAAAACTCAGACCCGTCGATGATCCTGCAAGAGACAGAATCGTGATCAGCCATG
| 103Thermotoga maritima MSB8 ASM854v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,797,700 | 1 |
CCACTGTGGGCCAGAAGCTAAAACTTCTCAGGGTTCACACAGAACTGGGAACCACTGTGAGCCAGAAGCTAAGACTTCTCAGAGCTCACCCAGAACTGGCAGATGTTCAAGTTCAAACTAGTCGGTGTGAAGAGATGCTAATGAACACCT
| 120homo sapiens
|
G000006725
|
ASM672v1
|
GCF_000006725.1
|
PRJNA224116
|
SAMN02603773
| null |
2004/06/04
|
Sao Paulo state (Brazil) Consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
| 637,000,348 |
RS_GCF_000006725.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 160,492 | 2,371 |
Xylella fastidiosa 9a5c
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xylella
|
Xylella fastidiosa
| true |
Eubacteria
|
Proteobacteria
| 0.98 | 0.993 | 0.9 | 1 | 2,731,750 | 3 | 52.62 | 2,679,306 | 1 | 2,664 | 765,931 | 82.59299 | 99.59 | 0.18 | 0 | 325 |
yes
|
yes
|
yes
| 20 |
high
| 1,421,030 | 0 |
AAAGGCCTTTGAGGATTTCCTTGCCGGCGACGGAGGCATGGAGCGTGTCGATCTTCAGCATAGTCATGATGTCTATAGGATGAGCTTGTGTCCGCTGATACGTTTTTATGGGACTGGGGCGGTTTGGATGCGTTGTTGGAGTGGTTGGGC
| 114Xylella fastidiosa 9a5c
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,339,250 | 1 |
GCTGGTTTCAAACTCCTGACCTCAAGTGATCCACCCACCTTGGCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCAGCCCAGTCCCAACCTTTTCATTTCCTGTACACTTTAAAAGTGTGGCTTCCTTTCACCAATAAAA
| 120homo sapiens
|
G000009825
|
ASM982v1
|
GCF_000009825.1
|
PRJNA224116
|
SAMD00061074
| null |
2004/12/30
|
Kao Corporation, Biological Science Laboratories, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
| 637,000,019 |
RS_GCF_000009825.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 66,692 | 79,880 |
Bacillus clausii KSM-K16
|
strain=KSM-K16
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus clausii
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 4,303,871 | 1 | 44.75 | 4,303,871 | 1 | 4,304 | 1,270,194 | 86.940919 | 98.67 | 0.33 | 0 | 373 |
yes
|
yes
|
yes
| 20 |
high
| 3,323,580 | 0 |
CCAGCCTACACGATTGGCCAATTCGGGATTGCTTACAATCCTGAGCAAACGAAAGGCCCAATCGAAAGCTGGAGCGACTTATGGGATGACTCTCTTGCAGGCAATTTAACGATTCCTTCTATTACATCGACAACAGGGCCAATGTTTTTA
| 8Bacillus clausii KSM-K16
|
G000008185
|
ASM818v1
|
GCF_000008185.1
|
PRJNA57583
|
SAMN02603967
| null |
2004/02/03
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
| 637,000,327 |
RS_GCF_000008185.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,275 | 158 |
Treponema denticola ATCC 35405
|
strain=ATCC 35405
| null |
Bacteria
|
Spirochaetes
|
Spirochaetia
|
Spirochaetales
|
Spirochaetaceae
|
Treponema
|
Treponema denticola
| true |
Eubacteria
|
Spirochaetes
| 1 | 1 | 1 | 1 | 2,843,201 | 1 | 37.87 | 2,843,201 | 1 | 2,578 | 885,778 | 91.799314 | 100 | 0 | 0 | 281 |
yes
|
yes
|
yes
| 20 |
high
| 309,400 | 0 |
ACACTTCTTCGTTGTAGAAAATATTTTTTACAATTTGTCCTATCGCCAAAACTCCATCAATCACTTTTGCTTTTTTTTCAGTGACCGATAAACTTAATATGCTTCCCCATGATGCACTGAAAATAAATAATTTATTGTTCGGAAATTCTT
| 104Treponema denticola ATCC 35405
|
G000010605
|
ASM1060v1
|
GCF_000010605.1
|
PRJNA224116
|
SAMD00060929
| null |
2008/04/08
|
The University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
| 641,522,653 |
RS_GCF_000010605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 455,632 | 1,911 |
Streptomyces griseus subsp. griseus NBRC 13350
|
strain=NBRC 13350
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces griseus
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 8,545,929 | 1 | 72.23 | 8,545,929 | 1 | 7,113 | 2,547,362 | 87.837226 | 99.84 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 241,280 | 0 |
GGCCCTTCGACAACCCTCGTGGGAGGGCCCTCTGACAGCCCGCGCGACCGGATCCGCCACGCGACTTTCGCAGCGTGGAGCCGAGGGGCGGTGTGCCACTGCGCGGCACCCGCCCCTCGGCTCCGGTCGGCGGAGCGTCAGCCGACCTGC
| 96Streptomyces griseus subsp. griseus NBRC 13350
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,006,700 | 1 |
GAAATGTAAAATAGCTGTAAGCTGTACAGTGGTATCATCATGGGGAGTAATATTTTAGATACATGGCTCTTACCTAACACTATTCAAACAAGAGGTTCAATAGAGCCAACAATGCCGGTAGTCACTACACATCTGCAATTGTCTTACTAC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,574,450 | 1 |
TCTGGTCCCAGCTCCTAATGAGAACGCGGCGCCTTGGCGTAAGTGTCCCCAACACATGCAGGAGTGAAGGAGAGGCAGGAGCATGTGGTACTTAAACAGGGACCTAGGTCTGTGCCGCTGGGTCTGCATCCTCATGAGACCTTGGACCAG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,565,450 | 1 |
CTTCTCGCCAGCTGTCGGCCCGAGGCTGCCCTCAGTTCCTGCCCCAAGGGCCTCTCCAACACCACAGCTTGCTTCATCAGAGCCAGGAGGGACAGTCTCTAGCAAGACAGAAGTGACAGTCTTGCCATTACCTTTGCCGTGTTCTGCTGG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,338,200 | 1 |
GCATTTCCTAATAAGCCTGCCTCAGCAGCTGACCATCGTGGGGAGTGTAGTTTGTTTCCCTTGCCAGGGAAATGCCCAGTGGCTGAGAGCCTGGCTGTGCTGCTGCCTGGAAGGTTGAGGGTTTTAACCCACAGAAACTGGTAATGGCTA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,958,550 | 1 |
TGTGGCTTGTCCTGTTAGAGACTCTAACTCCAGCCCTGATCCCACCAAGAGTCTGTTACATTCATAAGCTTCTCAATCTGGGATAAAGAGAAATCGGAGACATTTGTCCACCTTAGCTTTAAGAAGAAATGTCTCAAGTGCACACGCAGC
| 120homo sapiens
|
G000007205
|
ASM720v1
|
GCF_000007205.1
|
PRJNA224116
|
SAMN02602979
| null |
2003/07/25
|
ALTANA Pharma
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/205/GCF_000007205.1_ASM720v1
| 637,000,071 |
RS_GCF_000007205.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 182,082 | 83,558 |
Chlamydophila pneumoniae TW-183
|
strain=TW-183
| null |
Bacteria
|
Chlamydiae
|
Chlamydiia
|
Chlamydiales
|
Chlamydiaceae
|
Chlamydia
|
Chlamydia pneumoniae
| true |
Eubacteria
|
Chlamydiae
| 1 | 1 | 1 | 1 | 1,225,935 | 1 | 40.58 | 1,225,935 | 1 | 1,055 | 372,698 | 89.583869 | 99.49 | 0 | 0 | 219 |
yes
|
yes
|
yes
| 20 |
high
| 964,990 | 0 |
AGTTGGGAACACGGAGTGACTATAGGAGCGGGGATGTCATCGACGACAACTGCAGCTATTGTTGGTCAGTTAGGTAAACTCCGCCACGATCCTTTTGCCATGCTTCCTTTCTGTGGGTATAACATGGCATATTACTTCCAGCATTGGCTT
| 25Chlamydophila pneumoniae TW-183
|
G000009985
|
ASM998v1
|
GCF_000009985.1
|
PRJNA224116
|
SAMD00061077
| null |
2005/12/01
|
Tokyo University of Agriculture and Technology, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
| 637,000,155 |
RS_GCF_000009985.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 342,108 | 84,159 |
Magnetospirillum magneticum AMB-1
|
strain=AMB-1
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhodospirillales
|
Rhodospirillaceae
|
Magnetospirillum
|
Magnetospirillum magneticum
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 4,967,148 | 1 | 65.09 | 4,967,148 | 1 | 4,628 | 1,522,305 | 90.298759 | 99 | 0 | 0 | 360 |
yes
|
yes
|
yes
| 20 |
high
| 1,183,910 | 0 |
GGAGCTTGCCGCCCAGACCCGCGCCGCCGAGGCCCAGCGCGATCTGCTCGAAGCCATTCCCACCCCGCTGACCGTATCGCGCCTGTCCGACCATTCGCTGCTCCACGTCAACCAGCCCGCCTCCCTGCTGCTGGGGCTGCTCGACAGCTA
| 56Magnetospirillum magneticum AMB-1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 510,150 | 1 |
CCCACACTCTGTCCCACCTCACTCCGAGCTGGGGGTTCGGGGACCACAGGTCCCACCTGCACAGGTTGCATCTGGGGAATGGGCCTGTGGCAGAAAATGTGCGGCGCGGGGGGGGGGGTCCCAACCAGGCAGCCCCAACCTGGACTCTCC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,305,200 | 1 |
AACAACCTAAGACTTATGAATGGATAGACAAAGTATGGCCCATCCATATAATGGAATATTACTCAGCCATCACGGAAGGAAATTCTGATGTGTCTTGGATGAGCTTGGATGAGCCTTGAAGACATTATGCTGAATGGAAGAAGCCAGTCA
| 120homo sapiens
|
G000007905
|
ASM790v1
|
GCF_000007905.1
|
PRJNA224116
|
SAMN02604097
| null |
2003/06/26
|
Univ. Wuerzburg
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/905/GCF_000007905.1_ASM790v1
| 637,000,131 |
RS_GCF_000007905.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 235,279 | 32,025 |
Helicobacter hepaticus ATCC 51449
|
strain=ATCC 51449
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
|
Campylobacterales
|
Helicobacteraceae
|
Helicobacter
|
Helicobacter hepaticus
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 1,799,146 | 1 | 35.93 | 1,799,146 | 1 | 1,802 | 571,920 | 93.657102 | 99.94 | 0.35 | 0 | 303 |
yes
|
yes
|
yes
| 20 |
high
| 239,330 | 0 |
ACAGGCTCGCCACCAAATTGTCCATATTCAGAAGAATAAATACGTTTATATAATGTAGCTGTTGTAATATCTGGATTTGCCTCAAAATCCTCTAAAGCCTCTTGTTTAGTTACATCAAACAAATTAATTTTTATATTTTCTTGAAAATTA
| 47Helicobacter hepaticus ATCC 51449
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,750,450 | 1 |
GAGGCAGTGCAGGAAGGGCCGGGTTCTATGAGAGGACCTTAGGCAGCAGGAATACTCCATGACAGCAGAGATGCTGGGGCCTTTTCCCCAGAGCCTTATTCTTTTTTTTTTTTTTAATCTTTAGACAGAACTCTCATTCACAGCATTTAG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 165,300 | 1 |
CAGCCCCCCATCTCTGCATATACCAAAATCCATGCTTACTCACGTTTTGCTGTCACCCCTCTGGAATCCACGTATACGAAAATTCCAAATATTAGTTGGGCATAGTGGCAAGCACCTGTAGTCTCAGCCACGTGGGAGGTTGAGGTGGGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,269,100 | 1 |
GTGTGATCCCAGCTCACTGAAGCCTTGAGCTCCCTGAGCTCAAGCAATCCTCCCACTTCAGCCTCCCAAGCAGCTGGGACTACAGGTGCGTACCACCACACCTGGCTACTTTTTGTATTTTTGTAGAAATGGGGTTTCCCCGGCCAGGCG
| 120homo sapiens
|
G000009705
|
ASM970v1
|
GCF_000009705.1
|
PRJNA224116
|
SAMD00061094
| null |
2004/05/11
|
Kazusa
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
| 637,000,199 |
RS_GCF_000009705.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 103,690 | 103,690 |
Nostoc sp. PCC 7120
| null | null |
Bacteria
|
Cyanobacteria
| null |
Nostocales
|
Nostocaceae
|
Nostoc
|
Nostoc sp. PCC 7120
| true |
Eubacteria
|
Cyanobacteria
| 1 | 0.992 | 0.9 | 1 | 7,211,789 | 7 | 41.27 | 6,413,771 | 1 | 6,159 | 2,024,679 | 82.716938 | 99.19 | 0 | 0 | 360 |
yes
|
yes
|
yes
| 20 |
high
| 4,778,930 | 0 |
AGCAAAAACCACCTGTTTTAGTGGTGGAGGTTGCTTCCCCCAAACATTTGGGAGAATATAGCAGTAAAAAAGAACTCTATGCCCAAGAATTAGGCATTTTGTACTACGTTGTGTACAATCCTTTTCGACGTAAGAAATCTCCCCTAGAAG
| 70Nostoc sp. PCC 7120 ASM970v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,515,900 | 1 |
TTGGGCGAGAATATTCTGTTTCGACAGATTGGCCGTGTTGTACCCATCCTGCTGGAGTGTCAGGTGGGACTCACAAAATTAATTCCGTTTAATTGACAGTGAGTTTTGAAAGGTTGTGTGGCTCCCTCCTAGCATGGACTGCTTACTTTC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,379,900 | 1 |
CACACAGCCAGAAGGGGCGGGTGCAAGGCTGGGAAGCACAGGGCGGTGCTGGGCAGGATCCCAGGGGTTGGGTGCCACTGTCAGGGGCCCCAAGTCCCTCTGGCCCCTCGCACACAAGCATGGCCACCGAGGCTGGAAGGGCAGCAGCGT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,521,050 | 1 |
CAAAGGGCCAGCCTTGTGGACAGCCACACCTCTGCCAGGACCCCAGGTTGTGCAGGTCAGCAGGGATGGGCCCACTTGTATTTCCCAGGACTGGCGCCTGTGGTCTCCTAGTTCAGCGAGGAGGGAACCCTTCCCGCGCAGGGTGGTCCT
| 120homo sapiens
|
G000009065
|
ASM906v1
|
GCF_000009065.1
|
PRJNA57621
|
SAMEA1705942
| null |
2003/05/06
|
Sanger Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
| 637,000,351 |
RS_GCF_000009065.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 214,092 | 632 |
Yersinia pestis CO92
|
strain=CO92
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Yersiniaceae
|
Yersinia
|
Yersinia pestis
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.994 | 1 | 1 | 4,829,855 | 4 | 47.64 | 4,653,728 | 1 | 4,298 | 1,371,586 | 83.669593 | 99.82 | 0 | 0 | 372 |
yes
|
yes
|
yes
| 20 |
high
| 424,710 | 0 |
TGATGACATCGACGGCAGTGACGATGAGCTACCGGCTGATTTACCGTATTGCTCCGCGGTGCTTTTTACCGAATCCAATAAACTGTTGGCGTGAGCAGCACCGGTCACCAACGGGGCAGAAAAAGCCAGTGCTAAGAATAGGCGATGAAT
| 116Yersinia pestis CO92 ASM906v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,058,900 | 1 |
CGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,852,950 | 1 |
GTTCTTAGGTTCATCTGTTCTCTTCCTACAGGAAAGCGTGGTATTTTCCAAAGCCACAGGATAAGTCTTTTATAGAAGTGACAGGAGACTCTGTCTCTGCTATATCACTCCCTGTCACCTTGGAATAAAACCCATCTCTTAGCAAAAAAC
| 120homo sapiens
|
G000010085
|
ASM1008v1
|
GCF_000010085.1
|
PRJNA224116
|
SAMD00061079
| null |
2006/01/10
|
Kitasato Institute for Life Sciences, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
| 637,000,270 |
RS_GCF_000010085.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 343,509 | 63,612 |
Sodalis glossinidius str. 'morsitans'
|
strain=morsitans
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Pectobacteriaceae
|
Sodalis
|
Sodalis glossinidius
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.993 | 1 | 1 | 4,292,502 | 4 | 54.5 | 4,171,146 | 1 | 5,742 | 1,142,020 | 78.310831 | 100 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 2,976,480 | 0 |
AGTCCGGTAAAATGCATGCCTGCGGCCACGACGGCCACATGACCATGCTTCTGGGTGCGGCGCGCTATCTGGCCGCCACACGCCGCTTTAACGGTACCCTGCATGTCATTTTCCAGCCGGCGGAGGAGCGCGGTTTCGACAGCGGTGCGC
| 87Sodalis glossinidius str. 'morsitans' morsitans
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,607,400 | 1 |
AAGTGAGCTAAACAGGGATTTTCTCTTTTTGTAATGATGGAACTGGAAACTGGAGTCAATTTTTCTTGCTAAAAATAGAAAATCTGGGAAAATATTAACAGAAGAGTTTGAACTAACAATACAGTGAGGAATTATGGAGAATAAAATTTA
| 120homo sapiens
|
G000007205
|
ASM720v1
|
GCF_000007205.1
|
PRJNA224116
|
SAMN02602979
| null |
2003/07/25
|
ALTANA Pharma
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/205/GCF_000007205.1_ASM720v1
| 637,000,071 |
RS_GCF_000007205.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 182,082 | 83,558 |
Chlamydophila pneumoniae TW-183
|
strain=TW-183
| null |
Bacteria
|
Chlamydiae
|
Chlamydiia
|
Chlamydiales
|
Chlamydiaceae
|
Chlamydia
|
Chlamydia pneumoniae
| true |
Eubacteria
|
Chlamydiae
| 1 | 1 | 1 | 1 | 1,225,935 | 1 | 40.58 | 1,225,935 | 1 | 1,055 | 372,698 | 89.583869 | 99.49 | 0 | 0 | 219 |
yes
|
yes
|
yes
| 20 |
high
| 557,570 | 0 |
AATCCATCAAAGGAGACGTTGCTTGTAAAGCATCTCCGTAGCGAATCAATTTCAAAATATCAGGAGAGTAATACTGCTCTTCTATCAAAAAGAGTAGAAGTTCCTCGGCGTGCGCAGTGACTTCAGGACTAAGATCCACTCCCAGTAAGT
| 25Chlamydophila pneumoniae TW-183
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 632,700 | 1 |
ACATGGACGCGGCCTCCTATCAGCCCCCGGACACGGCCTCCGATCAGCCCCCGGCTGCTGCCCTCCGTGCTGTCTGGGGCAAGGGACAGGAGAGGACCCTTCCTCAGAGTGGGCCTGGACCACCCGGCCACCGGCAGGGCCCACCCAGGA
| 120homo sapiens
|
G000007805
|
ASM780v1
|
GCF_000007805.1
|
PRJNA57967
|
SAMN02604017
| null |
2003/03/05
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
| 2,508,501,074 |
RS_GCF_000007805.1
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 223,283 | 251,701 |
[Pseudomonas syringae] pv. tomato str. DC3000
|
strain=DC3000
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas syringae group genomosp. 3
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.997 | 0.9 | 1 | 6,538,260 | 3 | 58.34 | 6,397,126 | 1 | 5,862 | 1,948,843 | 87.825109 | 100 | 0.22 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 2,042,170 | 0 |
GTGTGATATCAAGCCCGGATTTGCACCGTGGGCCACCACCGCAGTGGGCCCTGGGCCAAGTTCTGCACCCAGCGTACGCAACTGATCACGCAGCGCATAGTTAGAACGTTGCGACGCTGTCAGGCTGGGTGAGTTGTACGTGTTTCCCCA
| 119[Pseudomonas syringae] pv. tomato str. DC3000
|
G000009765
|
ASM976v2
|
GCF_000009765.2
|
PRJNA224116
|
SAMD00061088
| null |
2016/03/24
|
NITE
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
| 637,000,304 |
RS_GCF_000009765.2
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Minor
| 227,882 | 33,903 |
Streptomyces avermitilis MA-4680 = NBRC 14893
|
strain=MA-4680
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces avermitilis
| true |
Eubacteria
|
Actinobacteria
| 1 | 0.999 | 1 | 1 | 9,119,895 | 2 | 70.7 | 9,025,608 | 1 | 7,915 | 2,675,970 | 86.456522 | 99.89 | 0.79 | 0 | 356 |
yes
|
yes
|
yes
| 20 |
high
| 8,211,580 | 0 |
GCCCTTCGTCCCCGCGACCGCCTTCCGTACCTGGTCGCCCCGCGCCTGATCCGCGACGACGACCAGCGGATCGCCGGTGCCCGCCGGGAAGTACCGCGCCGACACCTCCTGGCCGACGATGGAGTCGGGCCTGCCGGTGAAGGCGTCCGC
| 95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
|
G000007825
|
ASM782v1
|
GCF_000007825.1
|
PRJNA57975
|
SAMN02603340
| null |
2004/07/06
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
| 637,000,017 |
RS_GCF_000007825.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 226,900 | 1,396 |
Bacillus cereus ATCC 14579
|
strain=ATCC 14579
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus cereus
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 1 | 1 | 5,427,083 | 2 | 35.29 | 5,411,809 | 1 | 5,541 | 1,546,426 | 83.933929 | 98.18 | 0.58 | 18.18 | 383 |
yes
|
yes
|
yes
| 20 |
high
| 306,540 | 0 |
TCACGTAGATCGTTTCACAAACGATGTAGAACATGCAATTTGTAGTATGGAATACATTTACTTTGCACGACCAGATTCTAATATTGCAGGCGTTAACGTTCATGCAGCACGTAAGAATATGGGGAAACGTTTAGCGGCAGAAGCTCCTAT
| 7Bacillus cereus ATCC 14579
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,152,800 | 1 |
ATCGTGTAGCAGCACCCCACACACACAGGTGAGCATCTGATAGCCTGGAGCAGCACCCACACCCCCAGGCGAGCATCCGACAACCTGGAGCAGCACCCACAACCCTAGGTGAGCATCTGATGGTCTGGAGCAGCACCCACAACCACAGGT
| 120homo sapiens
|
G000007025
|
ASM702v1
|
GCF_000007025.1
|
PRJNA224116
|
SAMN02603141
| null |
2002/11/25
|
CNRS
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/025/GCF_000007025.1_ASM702v1
| 637,000,243 |
RS_GCF_000007025.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 272,944 | 781 |
Rickettsia conorii str. Malish 7
|
strain=Malish 7
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rickettsiales
|
Rickettsiaceae
|
Rickettsia
|
Rickettsia conorii
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 1,268,755 | 1 | 32.44 | 1,268,755 | 1 | 1,435 | 347,621 | 80.686027 | 99.46 | 0.33 | 0 | 218 |
yes
|
yes
|
yes
| 20 |
high
| 1,264,250 | 0 |
GAGCAGAAAGAATACCAGCTTATAAGGCGAGGTAGATATGTAGAATTTAATTTGCTATATGACCGTGGTACTAAATTCGGCTTAATGACCGATGGAAATGTCGAAGCAATATTAATGTCATTGCCACCTGAAGTAAAGTTTAATTGACTT
| 82Rickettsia conorii str. Malish 7
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,252,850 | 1 |
ACCCCCAGGCGAGCATCTGACTGCATGTAACAGCACCCACACCCCCAGGTAAGCATCTGACAGCCTGGAACAGCACCCTGCACCCCCAGGTGTGCACGTGACAGCCTGCAACAACACCCACACCCCCAGGAGAGCATCTGACTGCATGTA
| 120homo sapiens
|
G000007645
|
ASM764v1
|
GCF_000007645.1
|
PRJNA57861
|
SAMN02603126
| null |
2002/12/20
|
Chinese National HGC, Shanghai
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
| 637,000,281 |
RS_GCF_000007645.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 176,280 | 1,282 |
Staphylococcus epidermidis ATCC 12228
|
strain=ATCC 12228
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Staphylococcaceae
|
Staphylococcus
|
Staphylococcus epidermidis
| true |
Eubacteria
|
Firmicutes
| 1 | 0.977 | 0.9 | 1 | 2,564,615 | 7 | 32.05 | 2,499,279 | 1 | 2,354 | 721,937 | 82.93198 | 99.81 | 0 | 0 | 345 |
yes
|
yes
|
yes
| 20 |
high
| 786,370 | 0 |
GTTAAAGATGGAGAAATTGTAGCTGCACCAGTGTTAGCTTTATCATTAAGCTTTGACCATAGACAAATCGATGGTGCTACTGGACAAAATGCTATGAATCACATTAAACGCTTATTAAATAATCCAGAATTATTATTAATGGAGGGGTAA
| 88Staphylococcus epidermidis ATCC 12228 ASM764v1
|
G000010585
|
ASM1058v1
|
GCF_000010585.1
|
PRJNA224116
|
SAMD00060930
| null |
2009/01/28
|
Juntendo University School of Medicine
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
| 643,348,562 |
RS_GCF_000010585.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 458,233 | 69,966 |
Macrococcus caseolyticus JCSC5402
|
strain=JCSC5402
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Staphylococcaceae
|
Macrococcus
|
Macrococcus caseolyticus
| true |
Eubacteria
|
Firmicutes
| 1 | 0.965 | 1 | 1 | 2,219,737 | 9 | 36.56 | 2,102,324 | 1 | 2,352 | 677,409 | 89.896055 | 96.13 | 1.1 | 0 | 339 |
yes
|
yes
|
yes
| 20 |
high
| 234,650 | 0 |
TAATAATGATTTTGAACTTGAGAACCCTTCTATTGTAATAACATATTTAGAAGATGTCGATTATAGAAGAAAAGATATTATTAATTACAATTTAATTGACGAACTAATAAATCAACAAAAGGGAAGACAACTATTTAATATTTTAAAAGT
| 55Macrococcus caseolyticus JCSC5402
|
G000007825
|
ASM782v1
|
GCF_000007825.1
|
PRJNA57975
|
SAMN02603340
| null |
2004/07/06
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
| 637,000,017 |
RS_GCF_000007825.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 226,900 | 1,396 |
Bacillus cereus ATCC 14579
|
strain=ATCC 14579
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus cereus
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 1 | 1 | 5,427,083 | 2 | 35.29 | 5,411,809 | 1 | 5,541 | 1,546,426 | 83.933929 | 98.18 | 0.58 | 18.18 | 383 |
yes
|
yes
|
yes
| 20 |
high
| 3,622,580 | 0 |
ATGCTGGAACGAATCCTGGGAAATCGAAAGCATTTTTCAAACCTTCATCGAAAGCAACTTGGCGAATGTTATTTCCATAATCAAATGTAATTGCGCCTTTTTCTTGCATCGCAAGCATCGCTTCCACATGTTTTGTCATACTTTCTTTTG
| 7Bacillus cereus ATCC 14579
|
G000006725
|
ASM672v1
|
GCF_000006725.1
|
PRJNA224116
|
SAMN02603773
| null |
2004/06/04
|
Sao Paulo state (Brazil) Consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
| 637,000,348 |
RS_GCF_000006725.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 160,492 | 2,371 |
Xylella fastidiosa 9a5c
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xylella
|
Xylella fastidiosa
| true |
Eubacteria
|
Proteobacteria
| 0.98 | 0.993 | 0.9 | 1 | 2,731,750 | 3 | 52.62 | 2,679,306 | 1 | 2,664 | 765,931 | 82.59299 | 99.59 | 0.18 | 0 | 325 |
yes
|
yes
|
yes
| 20 |
high
| 374,920 | 0 |
GATGTGATTGCCGACTTGCGTTTGCCACGTGATGGTTATTGTGTATCCAGTAAGGTGTTCTTTGGGCCTGTGAAGGAGCCACGTCCGACGCAGTGTGGGCTTTCACGCAAGCATGTCCATGATGCTTGCCATGCTGCACTGAAGCGTTTG
| 114Xylella fastidiosa 9a5c
|
G000007845
|
ASM784v1
|
GCF_000007845.1
|
PRJNA57909
|
SAMN02603432
| null |
2003/04/30
|
J. Craig Venter Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
| 637,000,014 |
RS_GCF_000007845.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 198,094 | 1,392 |
Bacillus anthracis str. Ames
|
strain=Ames
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus anthracis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 5,227,293 | 1 | 35.38 | 5,227,293 | 1 | 5,474 | 1,495,110 | 84.244541 | 99.23 | 0.15 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 2,781,610 | 0 |
TTCTCATAAATAACGAAGGGATGGTGGAAAAACTTGAAAACTTGGCTCTATCACGTTAATGACTTTCTTCTGCTGCTCCTCCTTTCGTTATTAACAGAAAGGGACGAACTTATTGCTATTGCTATATTTTTAACAACAGGCTATATTGGA
| 5Bacillus anthracis str. Ames
|
G000010605
|
ASM1060v1
|
GCF_000010605.1
|
PRJNA224116
|
SAMD00060929
| null |
2008/04/08
|
The University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
| 641,522,653 |
RS_GCF_000010605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 455,632 | 1,911 |
Streptomyces griseus subsp. griseus NBRC 13350
|
strain=NBRC 13350
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces griseus
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 8,545,929 | 1 | 72.23 | 8,545,929 | 1 | 7,113 | 2,547,362 | 87.837226 | 99.84 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 8,288,670 | 0 |
GCTCCCCGTGCGTGGCCCCGCGCTCGGCGAGCAGCGGGAGGGACGCCATGGAGGTGGCGCTGGGCGCGCTCAGCCGCAGGTCCTGGTGGCCGCGCGCGGCGAGGAGTTCGCGGGCCTTGAGCGCCAGGTCGAAGGTGGCCGTGGCCGCGG
| 96Streptomyces griseus subsp. griseus NBRC 13350
|
G000007345
|
ASM734v1
|
GCF_000007345.1
|
PRJNA224116
|
SAMN03081414
| null |
2002/04/03
|
Broad Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
| 638,154,508 |
RS_GCF_000007345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 188,937 | 2,214 |
Methanosarcina acetivorans C2A
|
strain=C2A
| null |
Archaea
|
Euryarchaeota
|
Methanomicrobia
|
Methanosarcinales
|
Methanosarcinaceae
|
Methanosarcina
|
Methanosarcina acetivorans
| true |
Archaea
|
Euryarchaeota
| 0.98 | 1 | 0.8 | 0.9 | 5,751,492 | 1 | 42.68 | 5,751,492 | 1 | 4,884 | 1,470,904 | 75.340086 | 99.84 | 0.03 | 0 | 229 |
no
|
yes
|
yes
| 18 |
medium
| 117,260 | 0 |
ATCTCAATATGCAACTTTTTTCTCTCATACCTGCGGCAAACCCCGACAGATATCGATTTAGCTTTGTGGGGTCTCATTCAAGGCATTTCTTTCATTGTATATGGACATTTTAATTATAATTTCAATATATATCTATTATATATTCAATAG
| 61Methanosarcina acetivorans C2A
|
G000011005
|
ASM1100v1
|
GCA_000011005.1
|
PRJDA20361
|
SAMD00060931
| null |
2009/12/25
|
NITE
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/005/GCA_000011005.1_ASM1100v1
| 2,505,679,075 |
GB_GCA_000011005.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 304,371 | 570,267 |
Methanocella paludicola SANAE
|
strain=SANAE
| null |
Archaea
|
Euryarchaeota
|
Methanomicrobia
|
Methanocellales
|
Methanocellaceae
|
Methanocella
|
Methanocella paludicola
| true |
Archaea
|
Euryarchaeota
| 1 | 1 | 0.8 | 0.9 | 2,957,635 | 1 | 54.92 | 2,957,635 | 1 | 3,055 | 877,570 | 87.405714 | 100 | 0.65 | 0 | 198 |
no
|
yes
|
yes
| 17 |
medium
| 1,578,850 | 0 |
CCTTCTCGGCGAAGCAGGACGCCGGCAGAACTACGTCGGCCAGCTGAGCCGTCTCCGTCAGGAAGATATCCTGTACGACGAGGAACTCGAGGTTCTTTAACGCCTTCTCCACGTGGTGGAGGTCGGGGTCAGAGACCATCGGGTTCTCAC
| 58Methanocella paludicola SANAE
|
G000010165
|
ASM1016v1
|
GCF_000010165.1
|
PRJNA224116
|
SAMD00060942
| null |
2009/04/01
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
| 643,692,011 |
RS_GCF_000010165.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 358,681 | 1,393 |
Brevibacillus brevis NBRC 100599
|
strain=NBRC 100599 (= 47)
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Paenibacillaceae
|
Brevibacillus
|
Brevibacillus brevis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 6,296,436 | 1 | 47.27 | 6,296,436 | 1 | 5,917 | 1,875,522 | 87.757979 | 99.73 | 0.27 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 3,536,260 | 0 |
AACGACTTGCGACTACATACTTCCAGAGTATTATATATTTTACGCCTTTCACTTGCGACTTGCTTTGCATCTGTCATTGCATCAAATGAAAGGTTAAGTTACAATGTGTAAATATTTGCCATTTTATTGAAATTTAGTATAATTACCTTT
| 15Brevibacillus brevis NBRC 100599
|
G000008805
|
ASM880v1
|
GCF_000008805.1
|
PRJNA57817
|
SAMN02603997
| null |
2005/05/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/805/GCF_000008805.1_ASM880v1
| 637,000,189 |
RS_GCF_000008805.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 122,586 | 487 |
Neisseria meningitidis MC58
|
strain=MC58
| null |
Bacteria
|
Proteobacteria
|
Betaproteobacteria
|
Neisseriales
|
Neisseriaceae
|
Neisseria
|
Neisseria meningitidis
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 2,272,360 | 1 | 51.53 | 2,272,360 | 1 | 2,107 | 632,964 | 82.059313 | 99.75 | 1.9 | 80 | 322 |
yes
|
yes
|
yes
| 20 |
high
| 1,796,600 | 0 |
GCCTTGTCCTGATTTTTGTTAATCCACTATATTTCAGGATATAAAAACCGCCTGCTTCGCCAACCCGATGTTCAAACGGGTTGCGAAGCAGGTTTCATGGGTTTTCAAAGTTGAGATGTAGTCTCAATTTCATGGGTTTCATTATACATA
| 67Neisseria meningitidis MC58
|
G000010665
|
ASM1066v1
|
GCF_000010665.1
|
PRJNA224116
|
SAMD00060954
| null |
2009/06/11
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
| 644,736,352 |
RS_GCF_000010665.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 573,370 | 184,917 |
Desulfovibrio magneticus RS-1
|
strain=RS-1
| null |
Bacteria
|
Proteobacteria
|
Deltaproteobacteria
|
Desulfovibrionales
|
Desulfovibrionaceae
|
Desulfovibrio
|
Desulfovibrio magneticus
| true |
Eubacteria
|
Proteobacteria
| 0.99 | 0.996 | 1 | 1 | 5,315,620 | 3 | 62.67 | 5,248,049 | 1 | 4,555 | 1,546,858 | 85.744052 | 100 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 833,040 | 0 |
ACGTCGCGCTGGAAAATGTGGTGGGCTTTCAGGGCCTGGAGCACATGGTGCTGCAGGGTGATGTTGGCCGGATCGAACAGGTTGTCGATCTTGAGCACGTCTTCCATGCGGGCCACGCCCTCGTCGGTGAGGAGCACGGTGCGGGCCTTT
| 36Desulfovibrio magneticus RS-1
|
G000010665
|
ASM1066v1
|
GCF_000010665.1
|
PRJNA224116
|
SAMD00060954
| null |
2009/06/11
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
| 644,736,352 |
RS_GCF_000010665.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 573,370 | 184,917 |
Desulfovibrio magneticus RS-1
|
strain=RS-1
| null |
Bacteria
|
Proteobacteria
|
Deltaproteobacteria
|
Desulfovibrionales
|
Desulfovibrionaceae
|
Desulfovibrio
|
Desulfovibrio magneticus
| true |
Eubacteria
|
Proteobacteria
| 0.99 | 0.996 | 1 | 1 | 5,315,620 | 3 | 62.67 | 5,248,049 | 1 | 4,555 | 1,546,858 | 85.744052 | 100 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 1,838,850 | 0 |
GGCGCTCCAGCTGGGCGTTTAAGTACCGGTCCATGTCCTCCCGGGATTGGACGAGCCAGGAGGGCAGCTTTGTGGCCACCTTGACGCGCTGCCGGTAGCCGTCTTTGAGGGCCTTGCCGAGCAGGGGTTCGCTTGCGCCGCCGTGGTAGG
| 36Desulfovibrio magneticus RS-1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,632,600 | 1 |
TTACAGGTTAGTTCAGGATCTGTGCCTTATCAACCAAATTGTTTTGCCTATCCACCCTGTGGTGCCCAACCCGTACACTCTTGTCCTCAATCCCTTCCTCCACAACTCACTATTCCATGCTTGATCTTAAAGATGCTTTTTTCACTATTC
| 120homo sapiens
|
G000007305
|
ASM730v1
|
GCF_000007305.1
|
PRJNA224116
|
SAMN02604284
| null |
2002/02/27
|
Utah Genome Center
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
| 638,154,515 |
RS_GCF_000007305.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 186,497 | 2,261 |
Pyrococcus furiosus DSM 3638
|
strain=DSM 3638
| null |
Archaea
|
Euryarchaeota
|
Thermococci
|
Thermococcales
|
Thermococcaceae
|
Pyrococcus
|
Pyrococcus furiosus
| true |
Archaea
|
Euryarchaeota
| 1 | 1 | 0.9 | 0.9 | 1,908,256 | 1 | 40.77 | 1,908,256 | 1 | 2,102 | 594,193 | 91.722127 | 99.5 | 0 | 0 | 195 |
yes
|
yes
|
yes
| 19 |
high
| 1,445,210 | 0 |
AACTCCGTAGATAAACTTTCCTTTGTCTATCCAAACTTTAAACCTCTGAGCAATTAATGTCCTTGGATCTATTCCTCCTATTGGAGCAACTCTGAGAAATCCATTCTTTTCTATATGCGTGACCATCAGTCCAATTTGATCCATATGGGC
| 80Pyrococcus furiosus DSM 3638
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,307,450 | 1 |
ATATGTCTGTCTAGGTCAGACCAGGCCACTCCTTTGGCTTAACCCCCAGAGGCTTCCCTTTGCACCTGCAAAAAAAAAAAAAAAAAAAAAATCCCATGGCACTTACTGTGATGTTCAAGGCCTGGCCCAGTCTGGCCTCACCTAATCCCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,953,100 | 1 |
GCTTATAATCCAGTATTTTGGGAGGATCCCTTGAGCCCACGAGTTCAAGGCTGCAGTGAGCAGTGATCATACTACTGCACTCTGGCCTGGGTAACAGAGAGAGACCCTGTCTCTTAAACAGAAAAAAACAAAAAGATCACTGCAATAAAA
| 120homo sapiens
|
G000007565
|
ASM756v2
|
GCF_000007565.2
|
PRJNA57843
|
SAMN02603999
| null |
2016/02/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
| 637,000,222 |
RS_GCF_000007565.2
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 160,488 | 303 |
Pseudomonas putida KT2440
|
strain=KT2440
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas putida
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 6,181,873 | 1 | 61.52 | 6,181,873 | 1 | 5,584 | 1,861,131 | 88.706707 | 99.97 | 1.2 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 2,331,030 | 0 |
GAAATGGCGCCGCACGTCAGGGCTGCCAATGCGCTCGGCGGCCTGCAGGCCATGGCGACGGGCGTGGGGCAACGTCTGGAGGAGTGGCGCGCCTTGTCCGGCCATGTGGTCGAGGCCTGTGAACGTGACCCTCAGGAGTCAGGGGCAGTG
| 78Pseudomonas putida KT2440
|
G000009985
|
ASM998v1
|
GCF_000009985.1
|
PRJNA224116
|
SAMD00061077
| null |
2005/12/01
|
Tokyo University of Agriculture and Technology, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
| 637,000,155 |
RS_GCF_000009985.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 342,108 | 84,159 |
Magnetospirillum magneticum AMB-1
|
strain=AMB-1
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhodospirillales
|
Rhodospirillaceae
|
Magnetospirillum
|
Magnetospirillum magneticum
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 4,967,148 | 1 | 65.09 | 4,967,148 | 1 | 4,628 | 1,522,305 | 90.298759 | 99 | 0 | 0 | 360 |
yes
|
yes
|
yes
| 20 |
high
| 468,520 | 0 |
GGTATCCACCTTGGCGACCACCCGGGCGACGGCGTCCGCCGCCAGCCCCGGCAGCAGCGTGCCGATCGCGGCCGCTCCGAAGTCCCGCCAGACCAAGCCCGCCGAGCTGTAGGGCTCGCCATTGGGGCGCAACGGTTTGTCGCGCATGTG
| 56Magnetospirillum magneticum AMB-1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,851,500 | 1 |
AGGTTAGCAGGGGCCAGGGCGCCTCTCGGCAGGGCTAGGAGCAGGTGGACCCCAGAGTGGAGCCCACATCACAGGCACATCCAAGGGGGAAAGGGATTACTTGAGGCAGGTCCTCCACCACTGCTGAGGGTGGAGGCAAAACAGAGAAAG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 24,750 | 1 |
ACTCACACGGGTGCCATCTCAGCAGCTCACGGTGTAGAAACTGCGACACTCACGTGGGTGCCATCTCAGCAGCTCACGGTGTGGAAACTGCGACACTCACGTGGGTGCCATCTCAGCAGCTCACGGTGTGGAAACTGCGACACTCACGTG
| 120homo sapiens
|
G000008685
|
ASM868v2
|
GCF_000008685.2
|
PRJNA57581
|
SAMN02603966
| null |
2011/11/09
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2
| 637,000,036 |
RS_GCF_000008685.2
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 224,326 | 139 |
Borrelia burgdorferi B31
|
strain=B31
| null |
Bacteria
|
Spirochaetes
|
Spirochaetia
|
Spirochaetales
|
Borreliaceae
|
Borreliella
|
Borreliella burgdorferi
| true |
Eubacteria
|
Spirochaetes
| 1 | 0.879 | 1 | 0.9 | 1,521,208 | 22 | 28.18 | 910,724 | 1 | 1,511 | 441,681 | 85.52361 | 100 | 0 | 0 | 178 |
yes
|
yes
|
yes
| 20 |
high
| 417,820 | 0 |
AGGAAGAAGATTCAACCACCTGTATCGCAAAGCTTAAAGAAATAAAAGAAAAGAAAAATTATGACTTATTTTCAATGGGCATTGGAATAGGAGATCCTATTGCAAATATTATGATTACAATTCCTTATATAAATATTGATTTTGGATATG
| 14Borrelia burgdorferi B31
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,541,400 | 1 |
GTCTTCTCTCATTTATCAGTCACTCGGATTTGCTCTTCTGTGGGTTACCTGCTGATATACTTGGGCCATTTCAGTTGGGTGTTCTTCTTTTACTTGTTTTTCAGTGATTTTTATATTACAATTGTTCATCATTTGCCTGCTGTATGCATT
| 120homo sapiens
|
G000007985
|
ASM798v2
|
GCF_000007985.2
|
PRJNA57743
|
SAMN02603989
| null |
2012/07/31
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
| 637,000,120 |
RS_GCF_000007985.2
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,231 | 35,554 |
Geobacter sulfurreducens PCA
|
strain=PCA
| null |
Bacteria
|
Proteobacteria
|
Deltaproteobacteria
|
Desulfuromonadales
|
Geobacteraceae
|
Geobacter
|
Geobacter sulfurreducens
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 1 | 1 | 3,814,128 | 1 | 60.94 | 3,814,128 | 1 | 3,417 | 1,176,369 | 90.878544 | 99.35 | 0 | 0 | 363 |
yes
|
yes
|
yes
| 20 |
high
| 3,146,000 | 0 |
CCGGCAGGAAGGTCTACTACGCCAGTCACGTCCGTCGTACGGAAGTAGAACTGCGGACGGTACCCGTTGAAGAACGGCGTGTGACGGCCACCTTCTTCCTTCGTCAGGATGTACGCCTCGGCCTTGAACTTGGTGTGCGGAGTGATGCTC
| 43Geobacter sulfurreducens PCA
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,882,500 | 1 |
CCAAGCAGGCGTCGCATCCGGCCTGGGTTTGGCTTCTGCCAGCTCCTGGGCCTGCACTGGGAGGGGCTGAGCGTGGGGGCATGGGGGTGGGCAGGAGCCTGGGGACGTTCATTCACAGCACCGAGCTCTGTGGGTACTCTTTCATTCACC
| 120homo sapiens
|
G000008325
|
ASM832v1
|
GCF_000008325.1
|
PRJNA224116
|
SAMN02603968
| null |
2005/05/18
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
| 637,000,166 |
RS_GCF_000008325.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 243,233 | 414 |
Methylococcus capsulatus str. Bath
|
strain=Bath
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Methylococcales
|
Methylococcaceae
|
Methylococcus
|
Methylococcus capsulatus
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 1 | 1 | 3,304,561 | 1 | 63.58 | 3,304,561 | 1 | 3,046 | 1,020,877 | 91.024466 | 99.2 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 143,780 | 0 |
GTAGTCATCCAGGCTCTCGCCCTTGTAGGCGAACACCGGGATGCCGTCGGCGGCGATGGCGGCGGCGGCGTGGTCCTGGGTGGAGAAGATGTTGCAGGATGCCCAGCGCACTTCGGCGCCGAGGGCCACCAAGGTCTCGATCAGCACCGC
| 63Methylococcus capsulatus str. Bath
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,614,350 | 1 |
ATTATTTTGGATATATACCCAGAAGTGGGATCACTGGATCACATGATAATTCTATTTTTAATTTTTTTTAGGAATTACCGTTCTGTTTTCCACAGTAGCTACGCCATTTTACGTTCTCACCAACAGTATATAAGAGTTTCAATTTCTCCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,120,450 | 1 |
GGACGGGAACAGCCTGAGGGCCCCTCTGTGGCCCCTGGACGGGGAGGCTGTCAGACAGGAGGCCTTCACCTGGACCTGGCCCTCGCCCACCCACCCCTGCCAGCAAGGCCAGGGAGTGCTGGGTGGGGGCGCCAGCGACTCCCCTCCTCC
| 120homo sapiens
|
G000007345
|
ASM734v1
|
GCF_000007345.1
|
PRJNA224116
|
SAMN03081414
| null |
2002/04/03
|
Broad Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
| 638,154,508 |
RS_GCF_000007345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 188,937 | 2,214 |
Methanosarcina acetivorans C2A
|
strain=C2A
| null |
Archaea
|
Euryarchaeota
|
Methanomicrobia
|
Methanosarcinales
|
Methanosarcinaceae
|
Methanosarcina
|
Methanosarcina acetivorans
| true |
Archaea
|
Euryarchaeota
| 0.98 | 1 | 0.8 | 0.9 | 5,751,492 | 1 | 42.68 | 5,751,492 | 1 | 4,884 | 1,470,904 | 75.340086 | 99.84 | 0.03 | 0 | 229 |
no
|
yes
|
yes
| 18 |
medium
| 4,394,000 | 0 |
CGTTTTCTCCTGCAATATTGCCGGTGTTTTCTACTTTCACCCGGATCGTAACTGCATCTCCGCCCTCAACAGAGGCAGGCTCGATTGAGAAGTCCGAATATTCAAAAACGGCTTTATCTTCGGAAACCTCGACAATGGTTTCGCCTTCTT
| 61Methanosarcina acetivorans C2A
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,010,150 | 1 |
TCTACTAAGAAGACTCAGCTTGAGGACCCACAATGAGTCTAACTCTGGCCACAGGGAGAAAAGCTCCTGGCACATTCGTGAACCTAGACTGTTTATGCTGCTTTTCTCAATAATTATTTGTCAGCTGAGAAAGACCTATGTCTGGCCACA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,356,450 | 1 |
AACTGTGCTATGCATATAAAATGGAACTCCGCAGCAGTGTAGAAGTATGAGACAACTGTCTAGCCACTGATAAAGTTCTCCAAGGGATATGGTAAAGTGAAAAAGGTGTGTTGATGGTTAATGTACGTATGTGCCTTTGGGTAAAGATGG
| 120homo sapiens
|
G000010525
|
ASM1052v1
|
GCF_000010525.1
|
PRJNA224116
|
SAMD00060925
| null |
2007/10/16
|
University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
| 641,228,476 |
RS_GCF_000010525.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 438,753 | 7 |
Azorhizobium caulinodans ORS 571
|
strain=ORS 571
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhizobiales
|
Xanthobacteraceae
|
Azorhizobium
|
Azorhizobium caulinodans
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 5,369,772 | 1 | 67.32 | 5,369,772 | 1 | 4,810 | 1,620,542 | 88.922714 | 100 | 0 | 0 | 358 |
yes
|
yes
|
yes
| 20 |
high
| 4,702,750 | 0 |
GGCGGGCCGCGCCACGATTCGCGCGGCCGTGTTGCACCGCAACTTGGTGGCTTCCGCCGGTGGGCACCACCGACGCTGCGGCATTGCTCGGGCTTGCGCCATGCGCCCGGCGCTGGAGCGGTAAGCCGTTCAGGCCCCTGCCGTTTTCGC
| 4Azorhizobium caulinodans ORS 571
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 51,900 | 1 |
GGTAGCCTTTTTGGTGCCTCCTGACAATCACAGAAGCAGGCTGGGATCCTACCCAGGTATGGCAGAGCAAGTGAGCCCACCTAGGTGGGAATCCTTACCCTCCTAATCCTGCAGGTTCACTTCACAATCTTGTGTAGACCTTAAACCGTT
| 120homo sapiens
|
G000009745
|
ASM974v1
|
GCF_000009745.1
|
PRJNA224116
|
SAMD00061075
| null |
2003/10/03
|
NHRI, Taiwan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
| 637,000,337 |
RS_GCF_000009745.1
|
Multiisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 196,600 | 672 |
Vibrio vulnificus YJ016
|
strain=YJ016
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Vibrionales
|
Vibrionaceae
|
Vibrio
|
Vibrio vulnificus
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.996 | 1 | 1 | 5,260,086 | 3 | 46.68 | 3,354,505 | 1 | 4,639 | 1,553,759 | 87.03525 | 100 | 0.14 | 0 | 369 |
yes
|
yes
|
yes
| 20 |
high
| 284,960 | 0 |
CTGCTGTATCCATTCTCTATCCCAATCGTTAGCACTTGCCCATAACACGTCACTTATCACCTTGTTGGTTCATCATGCCGTCTATTTTCAGTCGTCGGGTGCAGACGCGGTGGTGAATTAGATGAAAGAAATGGCCATCAAACTAACCAG
| 108Vibrio vulnificus YJ016
|
G000009745
|
ASM974v1
|
GCF_000009745.1
|
PRJNA224116
|
SAMD00061075
| null |
2003/10/03
|
NHRI, Taiwan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
| 637,000,337 |
RS_GCF_000009745.1
|
Multiisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 196,600 | 672 |
Vibrio vulnificus YJ016
|
strain=YJ016
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Vibrionales
|
Vibrionaceae
|
Vibrio
|
Vibrio vulnificus
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.996 | 1 | 1 | 5,260,086 | 3 | 46.68 | 3,354,505 | 1 | 4,639 | 1,553,759 | 87.03525 | 100 | 0.14 | 0 | 369 |
yes
|
yes
|
yes
| 20 |
high
| 4,816,760 | 0 |
GCCACCGCAGTATTGGCCAACACCATGGATCACTCCAAGATGGACCATTCTAAGATGGATCATGGAAAAGTGGACCACAGTAAAATGGATCACGGCAACATGAAAGAAGGCAGCATGAAGATGGACCACTCGAACATGATGGGAATGGAA
| 108Vibrio vulnificus YJ016
|
G000008165
|
ASM816v1
|
GCF_000008165.1
|
PRJNA58091
|
SAMN02598266
| null |
2004/06/24
|
DOE Joint Genome Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
| 637,000,015 |
RS_GCF_000008165.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 260,799 | 1,392 |
Bacillus anthracis str. Sterne
|
strain=Sterne
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus anthracis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 5,228,663 | 1 | 35.38 | 5,228,663 | 1 | 5,471 | 1,495,624 | 84.251844 | 99.23 | 0.15 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 3,504,410 | 0 |
CTTTTATTTAAGTTACTAGTTCCTGTAGCTAGTAGTTCGATTTGACTAAATGTATCAGTAGGGAGAATTGACTGATTCTCAATGAATGCTCTCATTCTTTTAAATTCTTCAATAAACCTCACTTTAATTTTCATCGTTTCAATCGTGTTA
| 6Bacillus anthracis str. Sterne ASM816v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,593,550 | 1 |
GGGGTTTCATTAAAATCACTTCTCTCCTAACATTAACCACACTGCATTGAATTATTTATTCACTTGGTGTAGCTCCTACTGGGATATGAACTCCTGGCTATTCTTGTTTACTGCTTTTTATCCAAGTTCTGGCACAGGGCTTGGCACAGA
| 120homo sapiens
|
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