#genome
stringclasses 121
values | asm_name
stringclasses 120
values | assembly_accession
stringclasses 120
values | bioproject
stringclasses 45
values | biosample
stringclasses 120
values | wgs_master
float64 | seq_rel_date
stringclasses 98
values | submitter
stringclasses 76
values | ftp_path
stringclasses 120
values | img_id
float64 637M
2.51B
⌀ | gtdb_id
stringclasses 120
values | scope
stringclasses 3
values | assembly_level
stringclasses 1
value | genome_rep
stringclasses 1
value | refseq_category
stringclasses 3
values | release_type
stringclasses 2
values | taxid
float64 1.15k
681k
⌀ | species_taxid
float64 7
911k
⌀ | organism_name
stringclasses 120
values | infraspecific_name
stringclasses 112
values | isolate
stringclasses 1
value | superkingdom
stringclasses 2
values | phylum
stringclasses 18
values | class
stringclasses 30
values | order
stringclasses 56
values | family
stringclasses 75
values | genus
stringclasses 89
values | species
stringclasses 117
values | classified
bool 1
class | lv1_group
stringclasses 2
values | lv2_group
stringclasses 13
values | score_faa
float64 0.93
1
⌀ | score_fna
float64 0.88
1
⌀ | score_rrna
float64 0.1
1
⌀ | score_trna
float64 0.6
1
⌀ | total_length
float64 618k
9.12M
⌀ | contigs
float64 1
22
⌀ | gc
float64 22.5
72.2
⌀ | n50
float64 616k
9.03M
⌀ | l50
float64 1
1
⌀ | proteins
float64 525
7.92k
⌀ | protein_length
float64 172k
2.68M
⌀ | coding_density
float64 74
96.9
⌀ | completeness
float64 76.3
100
⌀ | contamination
float64 0
4.4
⌀ | strain_heterogeneity
float64 0
100
⌀ | markers
float64 124
383
⌀ | 5s_rrna
stringclasses 2
values | 16s_rrna
stringclasses 1
value | 23s_rrna
stringclasses 1
value | trnas
float64 14
20
⌀ | draft_quality
stringclasses 2
values | start_position
int64 0
10M
| human_label
int64 0
1
| autotrain_text
stringlengths 150
150
| autotrain_label
class label 121
classes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,875,000 | 1 |
TCAGGCAGTCTGCGGCCTCTCGTGTCTGGCATCTGCAGTGCAGCTGTGGGCTTCGAGCTCCATCTGTGCTGTTTCCTGGGTCAGCGCCTCCTTCCCTTTTATGGTCACATAATGTTCCCACCATAATTTTCCTTTGCAGTGACTTTGAAA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,348,000 | 1 |
CAGTGGAAACAGCCTTCAGCCCGGACTCAGAAGACCTGGGTTCTGCACTTAACTGCTGTGTGATCTTAGATGAGTTACTTAATCCTTCTGGGGTAGCAAAAAGAATGCTCTCCTCATAAAGTTTCTGTGGAGATGAAAAAAGGCAAAAGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 454,800 | 1 |
ACCTGCTGCTGGGCCACACCTGGACTCAGCTCTACTGAGGACTTCCTTTCCTCAGTTTCTCACCTGGCCCTGCCAGATCTTCCTGGCCCTGCCCAGCCAAGGCCCCTCCCCCAGTCAACAACCCTCAGAAAGGCTCCTCCCCCCTTCTCT
| 120homo sapiens
|
G000009925
|
ASM992v1
|
GCF_000009925.1
|
PRJNA58195
|
SAMD00061068
| null |
2004/09/16
|
Kitasato Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
| 637,000,025 |
RS_GCF_000009925.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 295,405 | 817 |
Bacteroides fragilis YCH46
|
strain=YCH46
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides fragilis
| true |
Eubacteria
|
Bacteroidetes
| 1 | 0.998 | 0.9 | 1 | 5,310,990 | 2 | 43.2 | 5,277,274 | 1 | 4,416 | 1,603,639 | 88.979964 | 99.26 | 0 | 0 | 347 |
yes
|
yes
|
yes
| 20 |
high
| 3,528,330 | 0 |
ATCGCTTGCGAAATAGCACAGGTTATTCGTGATAAACAGAAAGCAGGACGTTTCTGCGTACTGGCATTGCCGGGTGGAAATTCTCCGCGCAGCGTATATGCCGAATTAATTCGCATGCACAAAGAAGAGGGACTCAGTTTCCGTAACGTA
| 10Bacteroides fragilis YCH46
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,584,600 | 1 |
TGAGTCCAGGAGCTCGAGAACAGCCTGGGCAGCATAGCGAGACCCTGTTCCTACAAAAATAAATACAAAATAATTAGCTGGGCATGGTGGCACGGGCCTGTGGTCCTAGCTGCTTGGGAGGCTGAGGTGGGAGGATCGCCTGAGCCTGGG
| 120homo sapiens
|
G000009825
|
ASM982v1
|
GCF_000009825.1
|
PRJNA224116
|
SAMD00061074
| null |
2004/12/30
|
Kao Corporation, Biological Science Laboratories, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
| 637,000,019 |
RS_GCF_000009825.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 66,692 | 79,880 |
Bacillus clausii KSM-K16
|
strain=KSM-K16
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus clausii
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 4,303,871 | 1 | 44.75 | 4,303,871 | 1 | 4,304 | 1,270,194 | 86.940919 | 98.67 | 0.33 | 0 | 373 |
yes
|
yes
|
yes
| 20 |
high
| 4,217,070 | 0 |
AGGCCGCCAGCTTCATGCGAACGTTGAATATTACGCTGCTGCAATCATGGAAGCACTTCGCCTTAAACCCGATTGGTTCACACCGACATTTTGTGTAAGCCGCGTCGTCGGATGGTGCAGCCATGTCATCGAACAAAGCCAAGACAACCG
| 8Bacillus clausii KSM-K16
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,782,000 | 1 |
TGTTATGGTTCACTGCAGCCTCGACTTCATGGACTCAAGTGATCCTCCCATTTCAGCCTCCTGAGTAGCTGGGACTACAGGGGGCAGGTGCCACCATGGCCAGCTAATTTATTTTGTAGAGATGGGTTTCACTATGTTGCCCAGGCTGGT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 391,800 | 1 |
CCCCTCCGCCCCTCCATTCAGGGGCCTCTCCAGGAGCCTGGGGTGTGGCCCAGCAGTGGGATCCACTCACGAGTCCCGTCTCCACCTGCCCTCCCCAGGCGGCGGGAGCCTGTTTGCCATCCACGGAGACTGTGAGGCCTACGACACGCG
| 120homo sapiens
|
G000010785
|
ASM1078v1
|
GCF_000010785.1
|
PRJNA224116
|
SAMD00060961
| null |
2010/02/11
|
The University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/785/GCF_000010785.1_ASM1078v1
| 646,311,936 |
RS_GCF_000010785.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 608,538 | 940 |
Hydrogenobacter thermophilus TK-6
|
strain=TK-6
| null |
Bacteria
|
Aquificae
|
Aquificae
|
Aquificales
|
Aquificaceae
|
Hydrogenobacter
|
Hydrogenobacter thermophilus
| true |
Eubacteria
|
Bacteria
| 1 | 1 | 0.8 | 1 | 1,743,135 | 1 | 44 | 1,743,135 | 1 | 1,905 | 573,308 | 96.888881 | 98.78 | 0.51 | 0 | 310 |
yes
|
yes
|
yes
| 20 |
high
| 168,090 | 0 |
CTATGAGGAAAGCCATTATAAAGGGAAGCACTTTAAGCTCCGGTATCGCGTTGGGGTCTATATGCTTCATGCCTATGTAGTGGTTTAGAAGGTTTATGTTGTAAAGGTCAAACTCCGTACCGCCGGTTATCCTGTTTACCCATATGAACA
| 49Hydrogenobacter thermophilus TK-6 ASM1078v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,855,550 | 1 |
CTACCCTGGTGACTTAGGGTCGTGACTGCACCCCGGGCTCGCCTCTCTCGGCTCTGGCTGGCCACGACCTTCCTTTTGAAGGTGCCTGGAGGGTGACTCCGTGTTTCTTGTTTCCTCGTGGGGGATTTTAAATTTATGTCACTGGTGGTT
| 120homo sapiens
|
G000010345
|
ASM1034v1
|
GCF_000010345.1
|
PRJNA224116
|
SAMD00060915
| null |
2007/07/11
|
Japan Agency for Marine-Earth Science and Technology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
| 640,753,056 |
RS_GCF_000010345.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 387,093 | 387,093 |
Sulfurovum sp. NBC37-1
|
strain=NBC37-1
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
| null | null |
Sulfurovum
|
Sulfurovum sp. NBC37-1
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 2,562,277 | 1 | 43.87 | 2,562,277 | 1 | 2,552 | 795,482 | 91.463999 | 99.59 | 0.61 | 0 | 334 |
yes
|
yes
|
yes
| 20 |
high
| 694,070 | 0 |
CACGGGAAAAAGGTCCTCAGAGGCCCTGACATCCGCAAAGAGAGCCTGACCTCTATGATCAACTCCGTTAACAGCTACCATAAGATCATGCCCCGCTATTACCTGACCGATGAAGAGGTAAAGGCGATCTACGACTACCTTCAGAAGAAA
| 98Sulfurovum sp. NBC37-1 ASM1034v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,980,800 | 1 |
CATACATATTTATTTATTTAAACAGACTTTATATTTTAGGCAGTTTTAGTTCACAGCAAATTTGAGCAGAAAATGCAGAGGTCCCATAGACTTCCTTACCCAACATACCCACGGCCTCCCGCTCTGTCAACACCCTGCAGCTGATTCATC
| 120homo sapiens
|
G000008345
|
ASM834v1
|
GCF_000008345.1
|
PRJNA224116
|
SAMN02603281
| null |
2004/07/30
|
Goettingen Genomics Laboratory
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
| 637,000,215 |
RS_GCF_000008345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 267,747 | 1,747 |
Propionibacterium acnes KPA171202
|
strain=KPA171202
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Propionibacteriales
|
Propionibacteriaceae
|
Cutibacterium
|
Cutibacterium acnes
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 2,560,265 | 1 | 60.01 | 2,560,265 | 1 | 2,373 | 780,330 | 89.799572 | 100 | 0 | 0 | 319 |
yes
|
yes
|
yes
| 20 |
high
| 2,161,250 | 0 |
ATGGACGAGCTTTTATCCGAGATCGCCGCCTTGTCTGACAAAGTGAGCGTCGGTAAGCCCGTCGACAATGAGCGCACCCCCTCCTTTGCCATCACCCGCCCCGGAAGCCCCATCGACATCCGCTTTGCGGGCCTGCCGATGGGCCACGAA
| 77Propionibacterium acnes KPA171202
|
G000008545
|
ASM854v1
|
GCF_000008545.1
|
PRJNA57723
|
SAMN02603986
| null |
2001/01/09
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1
| 637,000,321 |
RS_GCF_000008545.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,274 | 2,336 |
Thermotoga maritima MSB8
|
strain=MSB8
| null |
Bacteria
|
Thermotogae
|
Thermotogae
|
Thermotogales
|
Thermotogaceae
|
Thermotoga
|
Thermotoga maritima
| true |
Eubacteria
|
Bacteria
| 1 | 1 | 0.9 | 1 | 1,860,725 | 1 | 46.25 | 1,860,725 | 1 | 1,866 | 602,696 | 95.430706 | 100 | 1.79 | 100 | 312 |
yes
|
yes
|
yes
| 20 |
high
| 1,705,340 | 0 |
CTTGGAGCATTCGTCGGAATTTCACAGCAGTTCAAAGACGTCCCCGTCAACCACTGGGCCTACGAAGCGGTAATGGAAATGTCGAAACTCGGTGTTCTCACTGGAATGCCGGATGGAACGTTCCAGGGTAACTCCTACCTCACCAGGTAT
| 103Thermotoga maritima MSB8 ASM854v1
|
G000007345
|
ASM734v1
|
GCF_000007345.1
|
PRJNA224116
|
SAMN03081414
| null |
2002/04/03
|
Broad Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
| 638,154,508 |
RS_GCF_000007345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 188,937 | 2,214 |
Methanosarcina acetivorans C2A
|
strain=C2A
| null |
Archaea
|
Euryarchaeota
|
Methanomicrobia
|
Methanosarcinales
|
Methanosarcinaceae
|
Methanosarcina
|
Methanosarcina acetivorans
| true |
Archaea
|
Euryarchaeota
| 0.98 | 1 | 0.8 | 0.9 | 5,751,492 | 1 | 42.68 | 5,751,492 | 1 | 4,884 | 1,470,904 | 75.340086 | 99.84 | 0.03 | 0 | 229 |
no
|
yes
|
yes
| 18 |
medium
| 1,754,090 | 0 |
AGCAACCGTAAATGAGGTCCTCAAGCTCACTATGGGTAAAGGTATAGAAACCCTTGCAACGCTTGAGGGCGAAAAAGCCGAAATTATTGAGTATACCGCATCCAGGCAGTCAAAAATCGTGGGAAAAACACTCAGCAAGGTCAAGTTTCC
| 61Methanosarcina acetivorans C2A
|
G000006725
|
ASM672v1
|
GCF_000006725.1
|
PRJNA224116
|
SAMN02603773
| null |
2004/06/04
|
Sao Paulo state (Brazil) Consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
| 637,000,348 |
RS_GCF_000006725.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 160,492 | 2,371 |
Xylella fastidiosa 9a5c
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xylella
|
Xylella fastidiosa
| true |
Eubacteria
|
Proteobacteria
| 0.98 | 0.993 | 0.9 | 1 | 2,731,750 | 3 | 52.62 | 2,679,306 | 1 | 2,664 | 765,931 | 82.59299 | 99.59 | 0.18 | 0 | 325 |
yes
|
yes
|
yes
| 20 |
high
| 1,284,920 | 0 |
TGCCGACGGCGACGGCTTCACCGTGGTTGAGGTTGTTGCTTCCTGGTGTGCTGTAGCCCTGTGCTGTTTCGATGGCGTGGCCGAAGGTATGGCCGAGATTGAGCAGGACGCGTTCCCCTTTTTCCAGTGGGTCACGTCCGACAATATCGG
| 114Xylella fastidiosa 9a5c
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,675,650 | 1 |
ATATTAGTCAGGGTTCTCTAGAGGGACAGAACTAATAGGATAGATGTATATGGAAAGGGGAGTTTATTAAGGAGAATTAACTCACACAATTACAAGGTGAAGTCCCACAATAGGCAATCTGCAAATTGAGGAGCAAGGAAGCTAGTGGTG
| 120homo sapiens
|
G000008505
|
ASM850v1
|
GCF_000008505.1
|
PRJNA58089
|
SAMN02598265
| null |
2004/12/27
|
DOE Joint Genome Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
| 637,000,023 |
RS_GCF_000008505.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 281,309 | 1,428 |
[Bacillus thuringiensis] serovar konkukian str. 97-27
|
strain=97-27
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus thuringiensis
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 1 | 1 | 5,314,794 | 2 | 35.37 | 5,237,682 | 1 | 5,361 | 1,516,528 | 84.049767 | 99.07 | 0.31 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 309,790 | 0 |
AATATGCTTGTGACATTTTAGATGAATTAAATATACCGTATGAGAAAAAGGTTGTATCCGCTCATCGGACTCCAGATTATATGTTTGAATATGCAGAGACGGCTCGTGAACGTGGATTGAAAGTTATTATTGCTGGAGCTGGTGGAGCAG
| 118[Bacillus thuringiensis] serovar konkukian str. 97-27
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,466,950 | 1 |
ACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGACCCGGGGTTCCCCCATCTTGGCCAGGCTGGTCTCGAACTCCTGATCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCCAGCCAAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,621,800 | 1 |
TGAAGGCACTTACCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTCTTGTACACAATGTGTGAGTAATGCTGTGCTCGTCAGAGGGGAGACTTTTATATTCAGTAATTTGTTTTATAAATTAAAGTGAAGGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,628,450 | 1 |
TGGGAGTTCAAGACCAGTCTGACCAACATGGAGAAACCCCGTCTCTACTAAAATACAAAATTAGCTGGGCGTGATGGCATGTGCCTGTAATCCCAGCTACTCTGGAGGCTGAGACAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,761,150 | 1 |
CCATCATTCAGATTTCTCATGGCATAGCCCTAGCCCCCCACCCCACTATCGGAGGAAACACAGTTTCCTGATAGGGTGGGCAAGGGGAGCAGGTTTCCCATCCCCCATTTCCTGTTGCTGACTCATGAAGAATGTGGTGAAGAGGCTTCC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,941,550 | 1 |
CAGTCTATCGTTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATCGTGAATAGTGCTGCAATAAACATACGTGTGCGTGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAAT
| 120homo sapiens
|
G000007525
|
ASM752v1
|
GCF_000007525.1
|
PRJNA57939
|
SAMN02603675
| null |
2005/01/21
|
Nestle Research Center, Switzerland
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
| 637,000,031 |
RS_GCF_000007525.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 206,672 | 216,816 |
Bifidobacterium longum NCC2705
|
strain=NCC2705
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Bifidobacteriales
|
Bifidobacteriaceae
|
Bifidobacterium
|
Bifidobacterium longum
| true |
Eubacteria
|
Actinobacteria
| 1 | 0.996 | 0.9 | 1 | 2,260,266 | 2 | 60.13 | 2,256,640 | 1 | 1,833 | 667,063 | 86.967994 | 100 | 0 | 0 | 289 |
yes
|
yes
|
yes
| 20 |
high
| 685,360 | 0 |
AAGACTTGTCACAAAGTCGCGTGATGACGCAGCCGCCGTTCAGGTGGATATGCCACGCTGTCATGATGACGGCCGAGCCGGAACACGGCAAATCCCGCATGCTGCATAGGCCAGCCGGTCACGGTCAGCCATGACACCGAAATATTGGAG
| 13Bifidobacterium longum NCC2705
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,918,800 | 1 |
AAGACTCCGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGGTTCACAGCAGTCAAAAGAACCACAAAGGAGCAGTAGTTTCTAAGCT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,261,000 | 1 |
AGACCAATGTAAAAACAAAGCATAATACATGTGATTTTCAAACATGCTGGACCTCAGGCCAATGTGACAACATTTCCTGTGGTCCAAGTCCCCAAAACAATTAGAGATTCATATGGAAGACTACAAAATAATCAACAAAAGAGAAATTGG
| 120homo sapiens
|
G000009145
|
ASM914v1
|
GCF_000009145.1
|
PRJNA224116
|
SAMEA3138193
| null |
2003/05/06
|
DOE Joint Genome Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
| 637,000,195 |
RS_GCF_000009145.1
|
Multiisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 228,410 | 915 |
Nitrosomonas europaea ATCC 19718
|
strain=ATCC 19718
| null |
Bacteria
|
Proteobacteria
|
Betaproteobacteria
|
Nitrosomonadales
|
Nitrosomonadaceae
|
Nitrosomonas
|
Nitrosomonas europaea
| true |
Eubacteria
|
Proteobacteria
| 0.98 | 1 | 0.9 | 1 | 2,812,094 | 1 | 50.72 | 2,812,094 | 1 | 2,670 | 848,291 | 88.875656 | 99.97 | 0.74 | 25 | 352 |
yes
|
yes
|
yes
| 20 |
high
| 249,990 | 0 |
TTCCGGCTGTGATTGCCTATAACCGCTATGCCAGTGATACTGCTCAGCTGGCAACCCGCTACGAAAGTTTCATAGAGGAAGTATCCAACGTACTGCAGCGTCGTGTGGCTAAACCTCGGGATATGGCGAATTTCTCATGATTCAGCGTCG
| 69Nitrosomonas europaea ATCC 19718
|
G000011005
|
ASM1100v1
|
GCA_000011005.1
|
PRJDA20361
|
SAMD00060931
| null |
2009/12/25
|
NITE
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/005/GCA_000011005.1_ASM1100v1
| 2,505,679,075 |
GB_GCA_000011005.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 304,371 | 570,267 |
Methanocella paludicola SANAE
|
strain=SANAE
| null |
Archaea
|
Euryarchaeota
|
Methanomicrobia
|
Methanocellales
|
Methanocellaceae
|
Methanocella
|
Methanocella paludicola
| true |
Archaea
|
Euryarchaeota
| 1 | 1 | 0.8 | 0.9 | 2,957,635 | 1 | 54.92 | 2,957,635 | 1 | 3,055 | 877,570 | 87.405714 | 100 | 0.65 | 0 | 198 |
no
|
yes
|
yes
| 17 |
medium
| 1,754,480 | 0 |
GGCAGCATGACCACGAACTTGGCACCCTTCGTATGGTCGCCGGGCACCCGGTCCTCCACCCATATACGGCCATGAAAATCGCGCACGAGCGTCTTCACCAGGTAGAGGCCCAGGCCTTTACCCTTAGCCCGGGTATTGCCGCGCTCGAAC
| 58Methanocella paludicola SANAE
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,427,250 | 1 |
TGGCATCGTCACGCGTTGCTGGTGGGAGTGTAAAGGGATACTCTGGAACACTGTTGGGCAATTTCTGTTTTCTTTTGTGACAGGGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGACACAATCACAGTTTACTACAGCCTCAAACTTC
| 120homo sapiens
|
G000008325
|
ASM832v1
|
GCF_000008325.1
|
PRJNA224116
|
SAMN02603968
| null |
2005/05/18
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
| 637,000,166 |
RS_GCF_000008325.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 243,233 | 414 |
Methylococcus capsulatus str. Bath
|
strain=Bath
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Methylococcales
|
Methylococcaceae
|
Methylococcus
|
Methylococcus capsulatus
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 1 | 1 | 3,304,561 | 1 | 63.58 | 3,304,561 | 1 | 3,046 | 1,020,877 | 91.024466 | 99.2 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 760,500 | 0 |
GGCTCCGTTCATGCTCAGCCCGGGCCGCTCGGGGCAAATTCCGTCGAACGGGAGCAAGCCGCGCCTCGGTCGGTCGACACCGCCCGCCCGCGGCTGCGGGTCATCCGCAGCACGCCCGAGGAGGCCGAAGCCCACGCCGCTCGCCTGGAG
| 63Methylococcus capsulatus str. Bath
|
G000010605
|
ASM1060v1
|
GCF_000010605.1
|
PRJNA224116
|
SAMD00060929
| null |
2008/04/08
|
The University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
| 641,522,653 |
RS_GCF_000010605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 455,632 | 1,911 |
Streptomyces griseus subsp. griseus NBRC 13350
|
strain=NBRC 13350
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces griseus
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 8,545,929 | 1 | 72.23 | 8,545,929 | 1 | 7,113 | 2,547,362 | 87.837226 | 99.84 | 0 | 0 | 357 |
yes
|
yes
|
yes
| 20 |
high
| 1,213,680 | 0 |
AGGCGGCGGCGCACGAGCGGTCCCGGCTGCCGGGGACGCAGAACCGCTGGTCGGGCAAGAAGGACCAGTCGTGGGTGCCGCTGCGCCCGGAGCGGGTGTGCGAGGTGGCCTACGACCACATGGAGGGCGACCGGTTCCGGCACACCACCC
| 96Streptomyces griseus subsp. griseus NBRC 13350
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,899,200 | 1 |
CGCCCAGCCCCCGTCCGCCCACCCAGCCCTCTGCCCGCCAGTGGAGCGGAGCCGAGAAGCAGGGAGTGCGGGAGGATGCCCGAGGTCTCACGTCAGGACCCTCGACGGGGGTGGGGTGGAGAGGGAGGTGGTGGGTGGGGTGGGTGGTGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,316,900 | 1 |
ATGCATATATGCACCTGCGCCCATACATGCATGCACGTGTATGCATGCATACACATGCACATGTACCTATACATGTGTATACACAATATACATGCCATACACGCATGCATGCTCACCTGCAAGGGCATGCACACACACAAATAGCTCCTC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,803,400 | 1 |
AAACAGTGTTAGATGGTAGAGATAAACCCAGCCATATACATAATTGCATCAACTGTAAATGGCTTAAGCATTCCAATTAAAAGCTAGAGAGTATCAGACTGGACAAAAAAACCATAATACTCAATGACATGCTTTCTACAAGAAACACTT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,837,550 | 1 |
TCTGGGTCACCTGTCGGGTGGGGTCTGGGTGTCTGTGGTTTTAAGAGTTCCCCAAGTGACCTTAATAGGCAGCAGAGACGAGGTCACAGATCCAACCTCTCAGGGGAGGCGCCAACATCACCTCAAGTGGAGGAGACATACAGACCGGAT
| 120homo sapiens
|
G000007645
|
ASM764v1
|
GCF_000007645.1
|
PRJNA57861
|
SAMN02603126
| null |
2002/12/20
|
Chinese National HGC, Shanghai
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
| 637,000,281 |
RS_GCF_000007645.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 176,280 | 1,282 |
Staphylococcus epidermidis ATCC 12228
|
strain=ATCC 12228
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Staphylococcaceae
|
Staphylococcus
|
Staphylococcus epidermidis
| true |
Eubacteria
|
Firmicutes
| 1 | 0.977 | 0.9 | 1 | 2,564,615 | 7 | 32.05 | 2,499,279 | 1 | 2,354 | 721,937 | 82.93198 | 99.81 | 0 | 0 | 345 |
yes
|
yes
|
yes
| 20 |
high
| 1,283,620 | 0 |
AAGTGAATGGTTAACAGATTTAAACATCTCAGAAGACAATATGCGCCTTAGAGATCATGATGAAGATGAATTATCACACTATTCCAATGCTACTACTGATATTGAATATAAATTCCCATTTGGTTGGGGTGAATTATGGGGTATTGCGAG
| 88Staphylococcus epidermidis ATCC 12228 ASM764v1
|
G000007465
|
ASM746v2
|
GCF_000007465.2
|
PRJNA57947
|
SAMN02604090
| null |
2011/09/01
|
Univ. Oklahoma
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
| 637,000,288 |
RS_GCF_000007465.2
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 210,007 | 1,309 |
Streptococcus mutans UA159
|
strain=UA159
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Streptococcus
|
Streptococcus mutans
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 0.9 | 1 | 2,032,925 | 1 | 36.83 | 2,032,925 | 1 | 1,897 | 591,301 | 85.692487 | 100 | 0 | 0 | 308 |
yes
|
yes
|
yes
| 20 |
high
| 1,471,600 | 0 |
TTACCAGTTAAAACAATTGTCATCCCAGTTAAAGCAGCATCACTTGCTGTTTTTTTGCCGAGATAAGTCAAGTTCAAACCTGCTGTTTTTAACTCTATCAAAAGTTTCTGTGCGCCTGCTGTTGCAAAGTAAGTTTTTAAAGACTCTGCA
| 92Streptococcus mutans UA159
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,302,800 | 1 |
ATATTACTATCCCCATCATACAGAAAACGACACTGAGGGTCATAGTGGAGCAGTAGCTTGCGCAACACCATAGTGGGGCAGTAGCTTGCTCAACACCATAGTGGGGCAGTAGCTTGCTCAGCATGAGAATACCCTGGACTCCAAAGCCCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,462,000 | 1 |
GTGTCCTCTGAGAAATGTGGACCGGAAGGATGAGGCATGCTCCCGGAAGTTAGCATCGCTCATGGCCCTCAGTCAGGGCATGGCAGAGGAACCACCCCTCTTGTAAAAGAGGCACACACAGCCCTCCTGCTGTAATCTGCCCCATGTCAC
| 120homo sapiens
|
G000008525
|
ASM852v1
|
GCF_000008525.1
|
PRJNA57787
|
SAMN02603995
| null |
1999/12/22
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/525/GCF_000008525.1_ASM852v1
| 637,000,132 |
RS_GCF_000008525.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 85,962 | 210 |
Helicobacter pylori 26695
|
strain=26695
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
|
Campylobacterales
|
Helicobacteraceae
|
Helicobacter
|
Helicobacter pylori
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 1 | 1 | 1,667,867 | 1 | 38.87 | 1,667,867 | 1 | 1,579 | 514,109 | 90.817493 | 99.36 | 0 | 0 | 275 |
yes
|
yes
|
yes
| 20 |
high
| 1,595,880 | 0 |
TCTAAATTGTGCGGCGTCTTTATTCAATAAAATATCTTTTTGATTTTGAAGCTCCACTTTAAAGGGAACAAGAAATCTTTGATTAAAAATTTCAATGACAGATTCCCATTCTTTCTGGTCTTTGCTAGCTTGTTTTATAATTTCTTCTAT
| 48Helicobacter pylori 26695 ASM852v1
|
G000007825
|
ASM782v1
|
GCF_000007825.1
|
PRJNA57975
|
SAMN02603340
| null |
2004/07/06
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
| 637,000,017 |
RS_GCF_000007825.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 226,900 | 1,396 |
Bacillus cereus ATCC 14579
|
strain=ATCC 14579
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus cereus
| true |
Eubacteria
|
Firmicutes
| 1 | 0.998 | 1 | 1 | 5,427,083 | 2 | 35.29 | 5,411,809 | 1 | 5,541 | 1,546,426 | 83.933929 | 98.18 | 0.58 | 18.18 | 383 |
yes
|
yes
|
yes
| 20 |
high
| 3,501,290 | 0 |
TAGTTCTCTCCACCATTTTCAGACCAGCTTGATCTGCTGCATTGTATAAAGTTGAAGATGTTTGACAAACACCACCGCCATATCCATCTACTAATTTACCATCAACTATTTCTTTCCCTAATTGATATCCTTTATCTGGTGTTGTATCAC
| 7Bacillus cereus ATCC 14579
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 737,550 | 1 |
TAGGGCCTGCCCCCAGGACAGCCTCAGGGAGCCCCTCGAACCCCAGTTAAATCACAGCCTAACCCCAAAACCCACTGGGCCAGGCCATTCTCATCTCCCCACTCCAGTCCATGCCCCACAGGGGTGAGGCACTTTCCCAGGGCAGTCGCT
| 120homo sapiens
|
G000010205
|
ASM1020v1
|
GCF_000010205.1
|
PRJNA224116
|
SAMD00060919
| null |
2008/05/29
|
Kitasato Institute for Life Sciences
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/205/GCF_000010205.1_ASM1020v1
| 642,555,145 |
RS_GCF_000010205.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 334,380 | 784 |
Orientia tsutsugamushi str. Ikeda
|
strain=Ikeda
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rickettsiales
|
Rickettsiaceae
|
Orientia
|
Orientia tsutsugamushi
| true |
Eubacteria
|
Proteobacteria
| 0.99 | 1 | 0.9 | 1 | 2,008,987 | 1 | 30.51 | 2,008,987 | 1 | 2,188 | 522,417 | 76.576503 | 99.51 | 0.49 | 0 | 186 |
yes
|
yes
|
yes
| 20 |
high
| 827,840 | 0 |
AAGTAGCATAGTTCAGGAAAAGCAAATAAAGTTTTTTATCCTATGGATATCTATTTACTTGGAAAAAGATAGCAAACAGATATCTTCGATATTACTTAGCTAAGTTAAACTATTTAACTTGCTGTAAAAACTTGCCAATATAACCTGTAA
| 72Orientia tsutsugamushi str. Ikeda
|
G000009925
|
ASM992v1
|
GCF_000009925.1
|
PRJNA58195
|
SAMD00061068
| null |
2004/09/16
|
Kitasato Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
| 637,000,025 |
RS_GCF_000009925.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 295,405 | 817 |
Bacteroides fragilis YCH46
|
strain=YCH46
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides fragilis
| true |
Eubacteria
|
Bacteroidetes
| 1 | 0.998 | 0.9 | 1 | 5,310,990 | 2 | 43.2 | 5,277,274 | 1 | 4,416 | 1,603,639 | 88.979964 | 99.26 | 0 | 0 | 347 |
yes
|
yes
|
yes
| 20 |
high
| 5,301,920 | 0 |
AGAAACCGAAGTACTGTCGGGATTCAAAGATAAAGAGGGGAACTCAATAGATAGAAAACTTATTGTAAATGATGATTTTAAGGTTAAGTTAGTATGAAAATAAGAATTGTAATTTACAATGAAGAGCTATTTCTTTCTGATAGTTTAGAC
| 10Bacteroides fragilis YCH46
|
G000008265
|
ASM826v1
|
GCF_000008265.1
|
PRJNA224116
|
SAMN02603345
| null |
2004/06/08
|
Institut of Microbiology and Genetics, University of Goettingen
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/265/GCF_000008265.1_ASM826v1
| 638,154,512 |
RS_GCF_000008265.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 263,820 | 82,076 |
Picrophilus torridus DSM 9790
|
strain=DSM 9790
| null |
Archaea
|
Euryarchaeota
|
Thermoplasmata
|
Thermoplasmatales
|
Picrophilaceae
|
Picrophilus
|
Picrophilus torridus
| true |
Archaea
|
Euryarchaeota
| 0.99 | 1 | 0.8 | 0.9 | 1,545,895 | 1 | 35.97 | 1,545,895 | 1 | 1,599 | 485,076 | 92.441789 | 99.59 | 0 | 0 | 196 |
no
|
yes
|
yes
| 18 |
medium
| 1,340,690 | 0 |
GTTAATGATTTCAATAATTAATAATACACGAATCATCTATAAAAAAGAATAATCTATCGGCATTATAAAAATATTTATAACATAATATATTTTTTAATCATGGATGTAAAAATATCAATGGATACTGAAAACTGCAATAGCCTGATGATG
| 74Picrophilus torridus DSM 9790
|
G000006865
|
ASM686v1
|
GCF_000006865.1
|
PRJNA57671
|
SAMN02603339
| null |
2001/03/21
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
| 637,000,144 |
RS_GCF_000006865.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,623 | 1,358 |
Lactococcus lactis subsp. lactis Il1403
|
strain=IL1403
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Lactococcus
|
Lactococcus lactis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 2,365,589 | 1 | 35.33 | 2,365,589 | 1 | 2,383 | 693,662 | 86.378488 | 100 | 0 | 0 | 310 |
yes
|
yes
|
yes
| 20 |
high
| 98,150 | 0 |
CATTGTTCTATTGCAAAATGACCTTAGGAAAGTGACGACATCTATTGAAATCAGTCGTGATACGTTAAAAATTGCTAAACAAGCGGTCATGATTGGGATTATCATTTGTATTATTTTGATGTTTGTTGCAGCTCTGGGAGTGATTCCAGC
| 54Lactococcus lactis subsp. lactis Il1403 IL1403
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,847,250 | 1 |
ACGAAGACCTGACCACTGGCTCTGCGACGAGGTCACGGTAGCCTCCTGTTTAGGGTGTGTGTGGAGGCGGGGTTGCCTGGCAAGTAGGGGCTGAGGGGACCAGTGCAGCTCTAGGGACAAAAGGAAGGGGGTTCCTCAGAGGGCTGTTCT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,687,050 | 1 |
AGCCTCAACCTCCTGGGCGCAGGCCATTCTCTCACCTTAGCCTCCCCAGTAGCTGGGACCACAGGTGTGCGCCACAGCACCTGGCTAATTTTCTTGGTCACTCCTACTTGCGTCCCTGCTGCCTTCGGAGTGGCCGCTTCTCCTTGCCTT
| 120homo sapiens
|
G000007565
|
ASM756v2
|
GCF_000007565.2
|
PRJNA57843
|
SAMN02603999
| null |
2016/02/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
| 637,000,222 |
RS_GCF_000007565.2
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 160,488 | 303 |
Pseudomonas putida KT2440
|
strain=KT2440
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas putida
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 6,181,873 | 1 | 61.52 | 6,181,873 | 1 | 5,584 | 1,861,131 | 88.706707 | 99.97 | 1.2 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 4,420,130 | 0 |
GCGAATACCACGACATCGAATGCATGTTCGGCTTCAAAGTTCGCCGGGCCTGACCCTCCCGCGCTGCCCGCCAGCGCCTTCCCCTATTCAACGATAACGCCTCCCCGGCGAGGACCACCAATGCCCATCACCTACGGAAGCGTCTGCAGC
| 78Pseudomonas putida KT2440
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,837,100 | 1 |
ATTGATTTTGGATGTCAACTTGACTAGATTAAGGAATACCCAGGTAGATGGTAAAGCATTGATTATTCTCTATGCTTCAGTACACACTGAGCCTGTCCCTTTTCTGCTGACAGGGAAGCCCAGTGGTTTGACATTGTGTAGAATGATCGG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,139,450 | 1 |
GGAGCTGGGAATGAGTGGCCACCGAGAAAGGAATCGAGTCACAGCCAACAGAGTAAGCTGTGTCACGTGATCCCAGAACATCAACCGCAAACAAGAAGACAGAATTTTTCCATTGATTTTGGCAACAACGTAACAGTTATTTGTGTCTCC
| 120homo sapiens
|
G000006865
|
ASM686v1
|
GCF_000006865.1
|
PRJNA57671
|
SAMN02603339
| null |
2001/03/21
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
| 637,000,144 |
RS_GCF_000006865.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,623 | 1,358 |
Lactococcus lactis subsp. lactis Il1403
|
strain=IL1403
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Lactococcus
|
Lactococcus lactis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 2,365,589 | 1 | 35.33 | 2,365,589 | 1 | 2,383 | 693,662 | 86.378488 | 100 | 0 | 0 | 310 |
yes
|
yes
|
yes
| 20 |
high
| 1,211,990 | 0 |
TTCAGATGATATCTTGCTAATCCTAATTTCCCCTTTGTATATCCAAGAGAGGTGGAATGAATCACAAGAGGTAAGAAGGCAGTTCAGACTGGGGAGCCACTCTCCTCAAGTACGCTTTCTAAGGTTAGGAATATTTTAAAACAAATTTTT
| 54Lactococcus lactis subsp. lactis Il1403 IL1403
|
G000010825
|
ASM1082v1
|
GCF_000010825.1
|
PRJNA224116
|
SAMD00060943
| null |
2009/08/26
|
Acetobacter pasteurianus genome sequencing consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
| 644,736,321 |
RS_GCF_000010825.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 634,452 | 438 |
Acetobacter pasteurianus IFO 3283-01
|
strain=IFO 3283 substr. IFO 3283-01
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhodospirillales
|
Acetobacteraceae
|
Acetobacter
|
Acetobacter pasteurianus
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.982 | 0.9 | 1 | 3,340,249 | 7 | 53.1 | 2,907,495 | 1 | 3,156 | 1,006,859 | 88.810714 | 100 | 0 | 0 | 352 |
yes
|
yes
|
yes
| 20 |
high
| 1,009,060 | 0 |
ATATCTGCGGCAGCCTGATCCAATGCTTCAAACAGGCGTGTGCCGTCATGCCCGTTCTGGCGCACTGTAATGGTGCGGATATTCAACCCATCCACCTGCATATGCGCCAATGCATCCGCAGCCTGCCGGGCAATAGCCGCCCGCTGCCCG
| 0Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
|
G000007085
|
ASM708v1
|
GCF_000007085.1
|
PRJNA224116
|
SAMN02603009
| null |
2002/05/14
|
Beijing Center.HGP
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1
| 637,000,318 |
RS_GCF_000007085.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 273,068 | 911,092 |
Caldanaerobacter subterraneus subsp. tengcongensis MB4
|
strain=MB4
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Thermoanaerobacterales
|
Thermoanaerobacteraceae
|
Caldanaerobacter
|
Caldanaerobacter subterraneus
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 2,689,445 | 1 | 37.57 | 2,689,445 | 1 | 2,674 | 812,453 | 88.995016 | 99.04 | 0.6 | 0 | 329 |
yes
|
yes
|
yes
| 20 |
high
| 2,054,130 | 0 |
TTTCGCCTAAAATTTCAAAAGGATTTTCAATGACAAGCTCTAAATGCTCTGGAGCTATTTCATTTGCAATACCAATTGCTTCTTTTAAATTATCTATAACAATTATCGCGCCAAAATTTTTTAAAGACTCTGCAATTATTTCTTTTCGCT
| 18Caldanaerobacter subterraneus subsp. tengcongensis MB4
|
G000007805
|
ASM780v1
|
GCF_000007805.1
|
PRJNA57967
|
SAMN02604017
| null |
2003/03/05
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
| 2,508,501,074 |
RS_GCF_000007805.1
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 223,283 | 251,701 |
[Pseudomonas syringae] pv. tomato str. DC3000
|
strain=DC3000
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas syringae group genomosp. 3
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.997 | 0.9 | 1 | 6,538,260 | 3 | 58.34 | 6,397,126 | 1 | 5,862 | 1,948,843 | 87.825109 | 100 | 0.22 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 1,611,480 | 0 |
CGTCGCAAAGAGGACGCTGAGCATCCTGAACGGCATGTCGACGCGGAGCGTCGCACGATAGTGGTCGTAGCTGAGATTCTCGTTCCCTACGCTCCAGCGTGGGAATGCAGTTCTCGACGCTCTGCGTCGCAAAGAGGACGCTGAGCATCC
| 119[Pseudomonas syringae] pv. tomato str. DC3000
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,645,950 | 1 |
CGGACCCAGACGGAACAATGAAATGGAATAATAATGGAAATGGAAATAATGTAAATGGAATAATATAAATAATATAATGTATTATAATATAAATAATAATAATATATTCAATAATATAAATGGAAATCAAAGCCATGAGAGCAAATGGAA
| 120homo sapiens
|
G000006725
|
ASM672v1
|
GCF_000006725.1
|
PRJNA224116
|
SAMN02603773
| null |
2004/06/04
|
Sao Paulo state (Brazil) Consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
| 637,000,348 |
RS_GCF_000006725.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 160,492 | 2,371 |
Xylella fastidiosa 9a5c
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xylella
|
Xylella fastidiosa
| true |
Eubacteria
|
Proteobacteria
| 0.98 | 0.993 | 0.9 | 1 | 2,731,750 | 3 | 52.62 | 2,679,306 | 1 | 2,664 | 765,931 | 82.59299 | 99.59 | 0.18 | 0 | 325 |
yes
|
yes
|
yes
| 20 |
high
| 299,780 | 0 |
GCTGCATATTCGCGACCATATTTCTGTGGGTCAGCATTGCGCCTTTGGGTGTCCCCGTTGTGCCGCCGGTGTATTGTAGAAAAGCTAAATCGTCGCTGGCGATGTGGATTGGAGGCATGGAATGCTTGCTTCCCAGCGCGAGTGCTTCAC
| 114Xylella fastidiosa 9a5c
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,100,650 | 1 |
GTTGTGGGCTCTGGAAGCCCCGGTCATGAGGCCCCACCGCCCCGCCCGGCACTAAGTAAGTGGCTCTCAGGGAAATCATAACACGATTAGCAGCTTCCGGCCAGTCTCACGGGCGTTAGCCTACTCCTCGCTCCTACACAAACACGGCAG
| 120homo sapiens
|
G000009065
|
ASM906v1
|
GCF_000009065.1
|
PRJNA57621
|
SAMEA1705942
| null |
2003/05/06
|
Sanger Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
| 637,000,351 |
RS_GCF_000009065.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 214,092 | 632 |
Yersinia pestis CO92
|
strain=CO92
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Yersiniaceae
|
Yersinia
|
Yersinia pestis
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.994 | 1 | 1 | 4,829,855 | 4 | 47.64 | 4,653,728 | 1 | 4,298 | 1,371,586 | 83.669593 | 99.82 | 0 | 0 | 372 |
yes
|
yes
|
yes
| 20 |
high
| 724,230 | 0 |
CTATTGCCTGCGTTAGTACTGGGTTAAGTTCATGACGGTGATACCAGTAAAAGCGTGATTACCAAACCGTTATAGGGTAAAAACAGAATTCAGGCGCGTTACTTAAGTAAAGAGAGAAGTATATGACATCAAAGCAATCCTCACCGGTGA
| 116Yersinia pestis CO92 ASM906v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,593,800 | 1 |
CTAGGATCTCAAAGGAGTTAAAAGCGGGACTATTTCTAAACATAAGGCACTATGTAATTGGAAAGTGTGGCTGTTAACACTGTTTCCCTCCTAAAACTCATTGAGGAGTGGCTCTCAGAGGGTGAATGCTCACCACGCCCATGTGTGTGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,504,500 | 1 |
TCAGGTAGTCATGAGACTCAGGTAAAAGGATGCATGCGAAGCTCATATCTGGCCCCCCTGACTGTCGCTTCCCTTCCTTCAGTGACAGCTGTTCGGAGACTCTCTCGTGTGTCCAACATTGCAGGTACGAGAGATCCTTGATGCTACCTC
| 120homo sapiens
|
G000010125
|
ASM1012v1
|
GCF_000010125.1
|
PRJNA224116
|
SAMD00061076
| null |
2005/08/12
|
Kitasato Institute for Life Sciences, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1
| 637,000,284 |
RS_GCF_000010125.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 342,451 | 29,385 |
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
|
strain=ATCC 15305
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Staphylococcaceae
|
Staphylococcus
|
Staphylococcus saprophyticus
| true |
Eubacteria
|
Firmicutes
| 1 | 0.992 | 1 | 1 | 2,577,899 | 3 | 33.19 | 2,516,575 | 1 | 2,502 | 730,892 | 83.519176 | 99.44 | 0 | 0 | 348 |
yes
|
yes
|
yes
| 20 |
high
| 130,910 | 0 |
ATAAAAATCGTATCTTCCAATCAGGATATGTTTATAGATTTGTGAAAGAGAATCGTCATTCTAATCAGGTATTAACTTTGACAAATTCAGACCAAATCCCGCATTTAGAAGAAATCGTACAAGCCCATCCAAATCTAGAGTTTCATGTTG
| 90Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 ASM1012v1
|
G000005825
|
ASM582v2
|
GCF_000005825.2
|
PRJNA224116
|
SAMN02603086
| null |
2010/12/15
|
Center for Genomic Sciences, Allegheny-Singer Research Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
| 646,311,908 |
RS_GCF_000005825.2
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 398,511 | 79,885 |
Bacillus pseudofirmus OF4
|
strain=OF4
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus pseudofirmus
| true |
Eubacteria
|
Firmicutes
| 1 | 0.995 | 1 | 1 | 4,249,248 | 3 | 39.86 | 3,858,997 | 1 | 4,260 | 1,228,222 | 85.144124 | 98.68 | 1.32 | 0 | 377 |
yes
|
yes
|
yes
| 20 |
high
| 2,008,240 | 0 |
ACCTGTTGTAAGAAGTGTTAGTCCGATAATGATCAGTAAATAATTTGTATATTCAACGTTTTGAGTGATAATTCCGTACCCGGCCAAACTAACCCCAGCAACAACCAACACAATCCTTAGTTTGTTAAGAATACAAATTCCCCTCCTATA
| 9Bacillus pseudofirmus OF4
|
G000008865
|
ASM886v1
|
GCF_000008865.1
|
PRJNA57781
|
SAMN01911278
| null |
2004/05/11
|
GIRC
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
| 637,000,108 |
RS_GCF_000008865.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 386,585 | 562 |
Escherichia coli O157:H7 str. Sakai
|
strain=Sakai substr. RIMD 0509952
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Enterobacteriaceae
|
Escherichia
|
Escherichia coli
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.996 | 0.9 | 1 | 5,594,477 | 3 | 50.48 | 5,498,450 | 1 | 5,399 | 1,663,868 | 87.620737 | 99.97 | 0.33 | 0 | 374 |
yes
|
yes
|
yes
| 20 |
high
| 1,180,010 | 0 |
TAATATCCGACAGTAATCACTCTGCGCAATAGCGCGGCCTTTTTCGTATTGCGGGCTGTTGTCTCTCTTCTGCCATTGTCCTGTAACTTCCGGACTTCAGCCCGCTCCTCATTTTACTCACAATATTATCCCGGCCGGGAGGATTCATGG
| 38Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
|
G000009025
|
ASM902v1
|
GCF_000009025.1
|
PRJNA224116
|
SAMEA3138187
| null |
2005/08/19
|
Max Planck Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/025/GCF_000009025.1_ASM902v1
| 637,000,090 |
RS_GCF_000009025.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 255,470 | 61,435 |
Dehalococcoides mccartyi CBDB1
|
strain=CBDB1
| null |
Bacteria
|
Chloroflexi
|
Dehalococcoidia
|
Dehalococcoidales
|
Dehalococcoidaceae
|
Dehalococcoides
|
Dehalococcoides mccartyi
| true |
Eubacteria
|
Chloroflexi
| 0.97 | 1 | 1 | 1 | 1,395,502 | 1 | 47.03 | 1,395,502 | 1 | 1,437 | 426,285 | 89.985038 | 99.01 | 0 | 0 | 259 |
yes
|
yes
|
yes
| 20 |
high
| 638,820 | 0 |
CCTGTCCCACAGAATACCCGCTATAAGGCTGGCGGGAAGCAGAGTCAGCCCGACTACACCCTGATACAAACCATAGGCAGTCCCCCGTTTATCAGACGGTATCATATCTGCCACAAAAGCCTTTGCCACCCCTTCCACAATCCCGTAGTA
| 34Dehalococcoides mccartyi CBDB1
|
G000008565
|
ASM856v1
|
GCF_000008565.1
|
PRJNA57665
|
SAMN02603976
| null |
2000/12/11
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
| 637,000,092 |
RS_GCF_000008565.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,230 | 1,299 |
Deinococcus radiodurans R1
|
strain=R1
| null |
Bacteria
|
Deinococcus-Thermus
|
Deinococci
|
Deinococcales
|
Deinococcaceae
|
Deinococcus
|
Deinococcus radiodurans
| true |
Eubacteria
|
Terrabacteria
| 1 | 0.991 | 0.8 | 1 | 3,284,156 | 4 | 66.61 | 2,648,638 | 1 | 3,248 | 987,980 | 88.625967 | 98.72 | 0 | 0 | 359 |
yes
|
yes
|
yes
| 20 |
high
| 1,507,610 | 0 |
AGCGCCACGAGGATTTGCAGCACCGAGTGCCACCCTGGCCCCGCCGCGAGCGCCCCGCCGAAGACCCGCAGCATCCCGGCGAAGGCGGCCACCTTGACCACCGTGCTCAGGAACAGCGACACCAGCGTGGGCGCCCCGCTGTACACGTCG
| 35Deinococcus radiodurans R1 ASM856v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,520,150 | 1 |
AAAATAGGTGGAAAGTCCCAGACCTAATGTGGAGGCTGGGGAAGCAGCCGGGCCGGGGAGGGCGGGGGCGGGGGCCTGTGTGTTTTTGCAGGACATGCACAAGGGTAAGAGGCTGTGCCCGGGGTGCTGTGACTGTGCCTTGTGACAGCA
| 120homo sapiens
|
G000010325
|
ASM1032v1
|
GCF_000010325.1
|
PRJNA224116
|
SAMD00060914
| null |
2007/07/11
|
Japan Agency for Marine-Earth Science and Technology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/325/GCF_000010325.1_ASM1032v1
| 640,753,037 |
RS_GCF_000010325.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 387,092 | 387,092 |
Nitratiruptor sp. SB155-2
|
strain=SB155-2
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
| null | null |
Nitratiruptor
|
Nitratiruptor sp. SB155-2
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 1 | 1 | 1,877,931 | 1 | 39.69 | 1,877,931 | 1 | 1,933 | 610,396 | 95.761026 | 98.78 | 0 | 0 | 319 |
yes
|
yes
|
yes
| 20 |
high
| 870,220 | 0 |
AATGAGGCAACTAAAATGATTTTACCTAAATAGTTGTTGTTGTCATCATATATGGATAGAGGGAAGTACAGATCAAAATCATCAAATGTAGGAGAATTGATAGATTGATGATGAAGAGGAAAAGATCTAGGATATAAAATTTGTCCATCA
| 68Nitratiruptor sp. SB155-2 ASM1032v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,961,700 | 1 |
ATTAAATTAATGTGTTCAAAAGTTCCTCATGCTATTGCTTGAGCCCACCCCCTGTCATAGTCCCCCAAGCCTTGTGCCTCAGCCTCACTGGTCTGCCTAGATACTGGTCCTCACCTCTCCACCTTTGGGATGGCACGTGGACCTGGTGCA
| 120homo sapiens
|
G000010305
|
ASM1030v1
|
GCF_000010305.1
|
PRJNA224116
|
SAMD00060909
| null |
2009/04/01
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
| 643,692,024 |
RS_GCF_000010305.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 379,066 | 173,480 |
Gemmatimonas aurantiaca T-27
|
strain=T-27
| null |
Bacteria
|
Gemmatimonadetes
|
Gemmatimonadetes
|
Gemmatimonadales
|
Gemmatimonadaceae
|
Gemmatimonas
|
Gemmatimonas aurantiaca
| true |
Eubacteria
|
FCB
| 1 | 1 | 1 | 1 | 4,636,964 | 1 | 64.27 | 4,636,964 | 1 | 4,004 | 1,466,180 | 93.177023 | 98.9 | 4.4 | 0 | 353 |
yes
|
yes
|
yes
| 20 |
high
| 1,729,910 | 0 |
TGCGGTATGGGCGGCGGCACGGGTACTGGTGCGGCGCCAGTGGTGTGCCAGTTGGCGCGTGAGGCCGGTGCGCTCACCGTGGGTATCGTCACCCGCCCGTTCCTCTTCGAAGGGCGCAAGCGGATGCGTCAGGCCGAAGAGGGCATCAAC
| 42Gemmatimonas aurantiaca T-27
|
G000007385
|
ASM738v1
|
GCF_000007385.1
|
PRJNA224116
|
SAMN02603680
| null |
2005/02/02
|
NIAB, Rural Development Administration
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
| 637,000,346 |
GB_GCA_000007385.1
|
Multiisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 291,331 | 347 |
Xanthomonas oryzae pv. oryzae KACC 10331
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xanthomonas
|
Xanthomonas oryzae
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 4,941,439 | 1 | 63.69 | 4,941,439 | 1 | 4,831 | 1,427,680 | 85.113992 | 99.82 | 0 | 0 | 355 |
yes
|
yes
|
yes
| 20 |
high
| 1,544,660 | 0 |
GCGCGTAATTGGTAAGCCATGACCTGCATCAGGCTATCGGGTACCGGGTCGCGCCGCGCCTGTAACGCATTAGCCACCATGACGGTGGCGACCAGGCCGATCAGCACGCCCAGCACCAGCATGAAGGCGTAGCGGGCCGCGCGGGATTGG
| 113Xanthomonas oryzae pv. oryzae KACC 10331
|
G000007845
|
ASM784v1
|
GCF_000007845.1
|
PRJNA57909
|
SAMN02603432
| null |
2003/04/30
|
J. Craig Venter Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
| 637,000,014 |
RS_GCF_000007845.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 198,094 | 1,392 |
Bacillus anthracis str. Ames
|
strain=Ames
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus anthracis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 5,227,293 | 1 | 35.38 | 5,227,293 | 1 | 5,474 | 1,495,110 | 84.244541 | 99.23 | 0.15 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 5,212,740 | 0 |
GCAGCACGAGTAATAAAGCAAATATGACATATAGGTTAGAAAATACCATATGTAAATATGATGTCGGTTCTACTTTTATAAAAGTTGATAATAAAATAAATATAACGTAATACCAAACAATACTTTTCGGTAATTGTATATCTTTAAATT
| 5Bacillus anthracis str. Ames
|
G000009925
|
ASM992v1
|
GCF_000009925.1
|
PRJNA58195
|
SAMD00061068
| null |
2004/09/16
|
Kitasato Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
| 637,000,025 |
RS_GCF_000009925.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 295,405 | 817 |
Bacteroides fragilis YCH46
|
strain=YCH46
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides fragilis
| true |
Eubacteria
|
Bacteroidetes
| 1 | 0.998 | 0.9 | 1 | 5,310,990 | 2 | 43.2 | 5,277,274 | 1 | 4,416 | 1,603,639 | 88.979964 | 99.26 | 0 | 0 | 347 |
yes
|
yes
|
yes
| 20 |
high
| 2,556,190 | 0 |
ATGGAAGTGCCGTATATGACCAGAGGCTTTTCTTGTGAAACCGGAAGAAAACGGAAAGAAGCGTCGGCAGGAACACCTATCTCCATCCATGATACACTGTTGTATAGCGGCAGGAATAGTTGGTATTCAAATCCGTTGCCGGATTTAGCC
| 10Bacteroides fragilis YCH46
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,281,700 | 1 |
CTACTCTCAGCAAAACGGGGGACGGGCATCAGAGACCAGCAGTAACTGCCACAACCCATCCTGAGCGCTGTGGAGAGGGGACAAGCCGCTCAGGGCACGAAGATTCTCCCACAGCAGGAGCCCAGCCCCGGCTTTGTCCAGCTTGGTCCC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,217,100 | 1 |
TCCTAACCAGTCTTCCCACCTCCTTCCACCTGGGCTGCCTGGTCTTCCATCACCTGGTCAACATGGACTCGGCATCTGCTGGGTGCCAGGCACTGTTCTGGGCTCTGGGGAATCCTTATTCTCCTGTAGTTTCTATTCTAGCGGGGGAGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 230,250 | 1 |
GACAGAATTCCAACAGCGGCCGTGTGGCTGCAGAGCCTCTCTCCCTCCCTGCCTCACCCTCGAGTCCCCGCCTGGGAGGGCTCAGGGTCACTCACTAAGCATCTTTCCCATGCGCTGCTGTGAGGCTGCTGCTATTAACTTGCTACTATG
| 120homo sapiens
|
G000007865
|
ASM786v1
|
GCF_000007865.1
|
PRJNA224116
|
SAMN02604086
| null |
2004/01/30
|
Univ. Minnesota
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
| 637,000,168 |
RS_GCF_000007865.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 262,316 | 1,764 |
Mycobacterium avium subsp. paratuberculosis K-10
|
strain=K-10
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Corynebacteriales
|
Mycobacteriaceae
|
Mycobacterium
|
Mycobacterium avium
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 4,829,781 | 1 | 69.3 | 4,829,781 | 1 | 4,544 | 1,497,326 | 91.345322 | 99.28 | 0.33 | 0 | 336 |
yes
|
yes
|
yes
| 20 |
high
| 2,794,870 | 0 |
GCACCAACGCGCGCGTCGCCGAGCTGCTCGAGACTGTGGGGCTGCCGCGGGCCGACGCGGCCCGCTACCCCGCGGAGTTCTCCGGCGGCCAGAAACAGCGCATCGGTATCGCGCGAGCGCTGGCGCTGCAACCGAAGATCCTCGCGCTCG
| 65Mycobacterium avium subsp. paratuberculosis K-10
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,417,700 | 1 |
CAGATGTATGTCCATACACCCACCTACATGTGTACCCACACATGACGTACATGTACACACACTCCTGATGACCTCTCCCAGGACCCAGGGCCCAAGGCCCCTCCAGCCTTCAGACACATTCTGTGTCCTGGGACCGGGATTCTCAATGGC
| 120homo sapiens
|
G000006845
|
ASM684v1
|
GCF_000006845.1
|
PRJNA57611
|
SAMN02604088
| null |
2005/02/14
|
Univ. Oklahoma
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
| 637,000,188 |
RS_GCF_000006845.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 242,231 | 485 |
Neisseria gonorrhoeae FA 1090
|
strain=FA 1090
| null |
Bacteria
|
Proteobacteria
|
Betaproteobacteria
|
Neisseriales
|
Neisseriaceae
|
Neisseria
|
Neisseria gonorrhoeae
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 1 | 1 | 2,153,922 | 1 | 52.69 | 2,153,922 | 1 | 2,142 | 609,210 | 83.31778 | 99.82 | 0.21 | 0 | 323 |
yes
|
yes
|
yes
| 20 |
high
| 417,820 | 0 |
CGTTTTGCGAGGCGGCGAACCTGCCGTGTGCCAAGCCTTGTTTGAACGTGCCCGACAATGCCATATTGCGGAATTTGGTACTGTCGGAATTGAACGGCTCGAGAAATACTTCGCGGCCGGCGGCAACGGTATAAACGCCTTGCCCGTCGA
| 66Neisseria gonorrhoeae FA 1090
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,658,400 | 1 |
TTGCTACCTTAAACTCATTTCCTGATTGGATCAACCCCCCCACTCCAGTGCTTGTCCCTCACTCCCTTGCGCTCTGGCCAGGGCAGCCCCTGGGATGGCTCTGAGCCCTGGGTTCTGCCCTGAGGATTCAGCTCCAGGTGCCCAGCGGTA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 479,250 | 1 |
TGGGGACGGGGCCGGGCGATGGTCCTGAGCACCTGCTCCTGCCCTCAGGTTTGACACAGGTTCGGGGCCGGCGGTGCTGACCAGTGCCGTGCCGGTAGAGCCGGGCCAGTGGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCAC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,264,750 | 1 |
CGCGCACACACACACGCGCACAAACACACACGCACGCACACACACGCACACACACACACGCACGCACACACACACGCACACACTCACACACACACACGCACGCACACGCACGCACACACACACAAACTACTATGTTTGCTGGGCCTGAAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,803,600 | 1 |
TTTTTCATGTGTTTTTTGGTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTTGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTA
| 120homo sapiens
|
G000008345
|
ASM834v1
|
GCF_000008345.1
|
PRJNA224116
|
SAMN02603281
| null |
2004/07/30
|
Goettingen Genomics Laboratory
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
| 637,000,215 |
RS_GCF_000008345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 267,747 | 1,747 |
Propionibacterium acnes KPA171202
|
strain=KPA171202
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Propionibacteriales
|
Propionibacteriaceae
|
Cutibacterium
|
Cutibacterium acnes
| true |
Eubacteria
|
Actinobacteria
| 1 | 1 | 1 | 1 | 2,560,265 | 1 | 60.01 | 2,560,265 | 1 | 2,373 | 780,330 | 89.799572 | 100 | 0 | 0 | 319 |
yes
|
yes
|
yes
| 20 |
high
| 735,020 | 0 |
TGGCCGACTGACGCCGCCGCGAGAACTACGAGAGAGTCAGCAAGAGAGAACTTATTGAGGATGGCGAATCCAGCGCACGCGACGCCACCAGCGAGAACCGTTTGCCATTCTGCCCACTTGGGACGCACCGTACGTGAAATGTAATCCAAT
| 77Propionibacterium acnes KPA171202
|
G000006965
|
ASM696v1
|
GCF_000006965.1
|
PRJNA57603
|
SAMEA3283068
| null |
2003/05/06
|
MELILO
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
| 637,000,269 |
RS_GCF_000006965.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 266,834 | 382 |
Sinorhizobium meliloti 1021
|
strain=1021
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhizobiales
|
Rhizobiaceae
|
Sinorhizobium
|
Sinorhizobium meliloti
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.997 | 0.1 | 1 | 6,691,694 | 3 | 62.17 | 3,654,135 | 1 | 6,303 | 1,956,944 | 86.157242 | 99.28 | 0.31 | 0 | 373 |
yes
|
yes
|
yes
| 20 |
high
| 2,501,720 | 0 |
GCGCATTCACGCATTCATGTGCGGCCTCGGGACGCAAAGTATAAAGCAATTCGAGGAAAATGACGTACGGTTTTGCGCCGGGAGTAGAGCCGAAATAACAAAGCCGGGCACTGGGCCCGGCTTTGTCGTCGATGAAAAGGTCCAGGGATC
| 86Sinorhizobium meliloti 1021
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,618,800 | 1 |
TAGCGGAGACGGGGTTTCACCCTGTTAGCCAGGACGATCCACGAGCATTTTTATGGATTCCTTTCTTTTTTTTACATGACTCCATCTTTTTTTGGATGTGCTTCACAGTAAGTTGCAGTGGTCAGTACACTTTGTCCCTGAACACTTCAA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,271,700 | 1 |
ATGGCTGTCATCTAGCTATTGTAAAGGGCATATGTATGAAATATAGCCAGTGCAACTCAGGAACTGGGTTTCTAATTTTATTTAAGTTTAAATAGCCATTGGATAGAGCAGCTTTTTGAAAGTGGCCTTCACTGAAACAGAGTTCATGCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,869,650 | 1 |
CGGAAGGAAGCAGCATGTTTTCGGGGACCCTGTGGTTTCTGGGTGCTGCTGTTCCCACCTGGCGAGCGCTGCCTTCTGCACGCTGCCAGGGCTGTGTGTGTACGCCGTCCCTCATTCCCTCGTGCAGCCTGGGAAAGCCTTACCCAGTGC
| 120homo sapiens
|
G000006925
|
ASM692v2
|
GCF_000006925.2
|
PRJNA62907
|
SAMN02603599
| null |
2011/08/03
|
Microbial Genome Center of ChMPH
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
| 637,000,264 |
RS_GCF_000006925.2
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 198,214 | 623 |
Shigella flexneri 2a str. 301
|
strain=301
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Enterobacteriaceae
|
Shigella
|
Shigella flexneri
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.998 | 1 | 1 | 4,828,820 | 2 | 50.65 | 4,607,202 | 1 | 5,003 | 1,415,151 | 86.329724 | 99.7 | 0.21 | 0 | 372 |
yes
|
yes
|
yes
| 20 |
high
| 1,763,320 | 0 |
TGATAATAAGATCATATTAGAGAACTTGAACTTTCATGTTTCGCCAGGCAAATGGCTATTACTGAAAGGCTACTCTGGTGCGGGAAAAACCACACTGCTTAAAACATTATCCCACTGCTGGCCGTGGTTTAAAGGTGATATTTCTTCTCC
| 85Shigella flexneri 2a str. 301
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 382,800 | 1 |
GCCCAGGTAAGCCTTGATGTCCACACGAAGCTTCCCCCAGAGCGGGCTGCTGGACGGCTGCAGCATCCTGCAGAGAGACCACCCACCCCTGGCTGGGAGGCCCCACGGCTCGGACGCGAGGCTGCTCAGCATGTTGGCGCGTGCCCTGGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,244,350 | 1 |
GAGAATTGTTTGAACCTGGGAGGCGGGGATTGCAGTGAGCGGAGATTGTGCCAGTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAATCCAATAAGATATGAGAGCCAATTATGTTCACAAGAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,927,400 | 1 |
CTGAAGCGAGTTAAAGCTGGGTCTCTCTCACCTGCAGCAACCAAGCAGTCAGACCCCCCTCCTCCTGAAGGACCCGAAGGACCCCTCCCAGAGGCAGAACTGGCTTTCCTGGGACCCTGAGAGAGGGAGGATGTTGCCCATGGCATTGAA
| 120homo sapiens
|
G000010165
|
ASM1016v1
|
GCF_000010165.1
|
PRJNA224116
|
SAMD00060942
| null |
2009/04/01
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
| 643,692,011 |
RS_GCF_000010165.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 358,681 | 1,393 |
Brevibacillus brevis NBRC 100599
|
strain=NBRC 100599 (= 47)
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Paenibacillaceae
|
Brevibacillus
|
Brevibacillus brevis
| true |
Eubacteria
|
Firmicutes
| 1 | 1 | 1 | 1 | 6,296,436 | 1 | 47.27 | 6,296,436 | 1 | 5,917 | 1,875,522 | 87.757979 | 99.73 | 0.27 | 0 | 381 |
yes
|
yes
|
yes
| 20 |
high
| 3,798,470 | 0 |
CTCCGAGCGATAAATCGTCCAGATAATACAGCTCAAGATATTCTCGCTGCTTGCCCTTGAGTAGCGGCGCGTAAAAGTCAAACAAGAGATTGACTTGATTGGTCTTTTCTAACATGAAACCAATCCTTTGCTATGAGGTACTCGTTTCAA
| 15Brevibacillus brevis NBRC 100599
|
G000009765
|
ASM976v2
|
GCF_000009765.2
|
PRJNA224116
|
SAMD00061088
| null |
2016/03/24
|
NITE
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
| 637,000,304 |
RS_GCF_000009765.2
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Minor
| 227,882 | 33,903 |
Streptomyces avermitilis MA-4680 = NBRC 14893
|
strain=MA-4680
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces avermitilis
| true |
Eubacteria
|
Actinobacteria
| 1 | 0.999 | 1 | 1 | 9,119,895 | 2 | 70.7 | 9,025,608 | 1 | 7,915 | 2,675,970 | 86.456522 | 99.89 | 0.79 | 0 | 356 |
yes
|
yes
|
yes
| 20 |
high
| 1,174,030 | 0 |
CGGTTGTCGTGGTGGGTGGTTGGAGCCAGTAGTGCTGGTGTTGGAAGGGGTAGGTGGGCAGGTCGAGGTGGTGGTTGTGGGGGTGGGGGTGGGTTTGGGTGTAGTGGTGGTGCCAGGTGGTGGGTGTCCGAATGCCGGTGGTGTGGGTGT
| 95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
|
G000009245
|
ASM924v1
|
GCF_000009245.1
|
PRJNA224116
|
SAMEA3138197
| null |
2006/03/02
|
LLNL
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/245/GCF_000009245.1_ASM924v1
| 637,000,111 |
RS_GCF_000009245.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 376,619 | 263 |
Francisella tularensis subsp. holarctica LVS
|
strain=LVS
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Thiotrichales
|
Francisellaceae
|
Francisella
|
Francisella tularensis
| true |
Eubacteria
|
Proteobacteria
| 1 | 1 | 0.9 | 1 | 1,895,994 | 1 | 32.15 | 1,895,994 | 1 | 2,100 | 571,581 | 88.799806 | 99.82 | 0.41 | 100 | 311 |
yes
|
yes
|
yes
| 20 |
high
| 1,713,140 | 0 |
GATACCTTTGTTTTTTAACTCTTGTGCCATTGCCTCAGCAGTTTTTCTGAGTCCTTGTGGATCTGCAAGCAAAGGAGTAATGTCGCGAAACATAATTCCTGGTTTTGGAAAATCAGGCACAGCTGCAATCTTACTCTTAATAAAATCTAA
| 40Francisella tularensis subsp. holarctica LVS ASM924v1
|
G000009925
|
ASM992v1
|
GCF_000009925.1
|
PRJNA58195
|
SAMD00061068
| null |
2004/09/16
|
Kitasato Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
| 637,000,025 |
RS_GCF_000009925.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 295,405 | 817 |
Bacteroides fragilis YCH46
|
strain=YCH46
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides fragilis
| true |
Eubacteria
|
Bacteroidetes
| 1 | 0.998 | 0.9 | 1 | 5,310,990 | 2 | 43.2 | 5,277,274 | 1 | 4,416 | 1,603,639 | 88.979964 | 99.26 | 0 | 0 | 347 |
yes
|
yes
|
yes
| 20 |
high
| 4,905,290 | 0 |
TAAATATTTTGTTTTATCTTCTTCCGTAATTTCCCGAATCACGCGACAAGGATTACCCGCAGCAATCACATTGGCAGGAATATCTCTATTTACTACACTTCCCGCACCTATCACTGTGTTGTCACCAATCGTCACGCCCGGTAATACGCA
| 10Bacteroides fragilis YCH46
|
G000009305
|
ASM930v1
|
GCF_000009305.1
|
PRJNA224116
|
SAMEA3138199
| null |
2006/06/28
|
Penn State Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1
| 637,000,130 |
RS_GCF_000009305.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 382,638 | 212 |
Helicobacter acinonychis str. Sheeba
|
strain=Sheeba
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
|
Campylobacterales
|
Helicobacteraceae
|
Helicobacter
|
Helicobacter acinonychis
| true |
Eubacteria
|
Proteobacteria
| 1 | 0.994 | 0.9 | 1 | 1,557,588 | 2 | 38.17 | 1,553,927 | 1 | 1,547 | 470,618 | 89.011857 | 99.12 | 0.7 | 100 | 271 |
yes
|
yes
|
yes
| 20 |
high
| 515,580 | 0 |
AAGCGTTGTGTTGCCAGGAGTTGAAGGGGAATTTGGGGTTCTTTATGGGCATAGCAACATGATCACTTTGCTCCAAGCGGGAGTGATTGAGATTGAAACCGAGAGTCAAAAAGAACACATTGCGATTAGTTGGGGCTATGCAGAAGTCAC
| 46Helicobacter acinonychis str. Sheeba
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 696,000 | 1 |
TTCTCCTGCCTCGGCTTCCCGAGTAGCTGGGACTACAGGTGTGCGCCATCATGCCCAGCTAATATTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGACCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCTGAGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,926,600 | 1 |
ACATGAATGAAAGTTTAATGGCATCAAATCAACTATGGATTACTAGTATCCAGGTAAAAGTAAAAACTATATAGAGTTGAAAATGTTGCTAAGAAAATATATTAACATATAAAAATACCTTTTAAAACTTCCTTCATTTTTTGTTTATAA
| 120homo sapiens
|
G000009185
|
ASM918v1
|
GCF_000009185.1
|
PRJNA224116
|
SAMEA3138195
| null |
2006/06/22
|
Max Planck Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
| 637,000,129 |
RS_GCF_000009185.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 362,976 | 293,091 |
Haloquadratum walsbyi DSM 16790
|
strain=DSM 16790 = HBSQ001
| null |
Archaea
|
Euryarchaeota
|
Halobacteria
|
Haloferacales
|
Haloferacaceae
|
Haloquadratum
|
Haloquadratum walsbyi
| true |
Archaea
|
Euryarchaeota
| 1 | 0.997 | 0.9 | 1 | 3,179,361 | 2 | 47.86 | 3,132,494 | 1 | 3,071 | 845,315 | 78.317152 | 99.3 | 0 | 0 | 220 |
no
|
yes
|
yes
| 19 |
medium
| 2,913,170 | 0 |
GTCCGATCAACGGGTGATCCAACAGCAAATGCAACAGGCGCACTGGGTGTGTTTGTCTCTGTCTATGAATTTCTCAATATTCCATTCACCCTGGCGACAGTCGTCGGTGGTGTGATGAGTGTCTTGACTATTCGCTATATTTCGAGTTTT
| 45Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
|
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