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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Exploring Code for Data"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"import pandas as pd"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"metadata = pd.read_csv(\"../data/focus/metadata.csv\")"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"metadata"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"idx = 0\n",
"# File Path\n",
"metadata.iloc[idx, 1]"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"# Focus Value\n",
"metadata.iloc[idx, 5]"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Testing FocusDataSet"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"from importlib.machinery import SourceFileLoader\n",
"\n",
"focus_datamodule = SourceFileLoader(\"focus_datamodule\", \"../src/datamodules/focus_datamodule.py\").load_module()\n",
"from focus_datamodule import FocusDataSet\n",
"\n",
"ds = FocusDataSet(\"../data/focus/metadata.csv\", \"../data/focus/\")\n",
"\n",
"for d in ds:\n",
" break\n",
"\n",
"d"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"from focus_datamodule import FocusDataModule\n",
"\n",
"datamodule = FocusDataModule(data_dir=\"../data/focus\", csv_file=\"../data/focus/metadata.csv\")\n",
"datamodule.setup()"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"for data in datamodule.test_dataloader():\n",
" break\n",
"\n",
"len(data[\"focus_value\"])"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"import types\n",
"import importlib.machinery\n",
"focus_module = SourceFileLoader('focus_module', '../src/models/focus_module.py').load_module()\n",
"from focus_module import FocusLitModule\n",
"\n",
"model = FocusLitModule()\n",
"\n",
"model.step(data)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Benchmark in-memory and from disk"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"import time\n",
"\n",
"iterations = 10"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"datamodule = FocusDataModule(data_dir=\"../data/focus150\", csv_file=\"../data/focus150/metadata.csv\")\n",
"datamodule.setup()\n",
"\n",
"\n",
"start = time.perf_counter()\n",
"counter = 0\n",
"for i in range(iterations):\n",
" for data in datamodule.train_dataloader():\n",
" counter += 1\n",
"\n",
"print(time.perf_counter() - start)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"datamodule = FocusDataModule(data_dir=\"../data/focus150\", csv_file=\"../data/focus150/metadata.csv\", in_memory=False)\n",
"datamodule.setup()\n",
"\n",
"start = time.perf_counter()\n",
"counter = 0\n",
"for i in range(iterations):\n",
" for data in datamodule.train_dataloader():\n",
" counter += 1\n",
"print(time.perf_counter() - start)"
]
}
],
"metadata": {
"interpreter": {
"hash": "f9f85f796d01129d0dd105a088854619f454435301f6ffec2fea96ecbd9be4ac"
},
"kernelspec": {
"display_name": "Python 3.9.7 64-bit",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.8.10"
},
"orig_nbformat": 4
},
"nbformat": 4,
"nbformat_minor": 2
}
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