NucArg: Antibiotic Resistance Detection

This model is a fine-tuned version of InstaDeepAI/nucleotide-transformer-v2-100m-multi-species on the NucArg dataset. It achieves the following results on the evaluation set:

  • Loss: 0.467312
  • F1: 0.891351
  • Recall: 0.891115
  • Precision: 0.893135

Training hyperparameters

The following hyperparameters were used during training:

  • learning_rate: 0.000025
  • train_batch_size: 8
  • gradient_accumulation_steps= 8
  • eval_batch_size: 64
  • seed: 42
  • lr_scheduler_type: cosine
  • training_epoch: 5
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