finally working. Now the CLI properly installs using pip and it can be used without any dependency issues across all relevant operating systems

removed wrong import

tried importing Config directly, instead of the script

test

typo

worked, now have to add similar fix for all scripts

added '.' to paths when importing

minor path fix for packages

removed redundant copy of package

new install test

tested new package include

tried removed redundant py_module

added init file to module

removed all packages

add utils as module

test removed package, which already was added as python module instead

added python module dep

moved file to utils

tried adding livermask as package to install

bug

typo

added missed dep in setup.py

tried fixing dependencies when installing

fix find_packages

typo

added install argument to set which cupy version to install livermask with

started setting up install option for pip, but will likely remove as it may not be possible to generalize that easily...

ignore all .npz files for future commits

removed another silly dependency

removed redundant file (vessels model), which is downloaded on the fly

removed dataclasses from requirements

Added option to segment the portal and hepatic veins (one class). Liver segmentation is now run in a separate Process, as TF is unable to clear the GPU manually - only when a session is killed, which is only when a Process is finished/killed.

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build new release

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typo fix '.ini' instead of '.nii'. Also fixed casting to reduce memory usage

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Update README.md

updated python version dependency

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added check to skip non-nifti files in for loop