jasmineChen/Gen_tumor

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Gen_tumor

The Gen_tumor dataset is organized as:

Gen_tumor
    ├── PETCT_fe705ea1cc-1   //id
    │   ├── ct.nii.gz        // CT scans
    │   └── segmentations
    │       └── tumor.nii.gz   // Label
    ├── volume-covid19-A-0003
    │   ├── ct.nii.gz
    │   └── segmentations
    │       └── tumor.nii.gz
    ├── volume-covid19-A-0011
    │   ├── ct.nii.gz
    │   └── segmentations
    │       └── tumor.nii.gz

Noting that unlabeled CT scans will have a empty segmentations directory.

What's in the files?

jhu_pro/
    ├── Dataset_Statistic.md  // Basic statistics, like tumor distribution, data size
    ├── Gen_tumor1.0ZipFolder  // The Gen_timor dataset
    │   ├── Gen_tumor1.0.zip.001 
    │   ├── Gen_tumor1.0.zip.002
        ......
    │   └── Gen_tumor1.0.zip.029
    ├── Gen_tumor2.0ZipFolder
    │   ├── Gen_tumor2.0.zip.001
    │   ├── Gen_tumor2.0.zip.002
        ......
    │   ├── Gen_tumor2.0.zip.040
    │   └── Gen_tumor2.0.zip.041
    ├── Train_labeled_total.csv  // id, origin dataset, spacing, abnormal or not
    ├── Train_labeled_tumor.csv  // id, tumor numbers, tumor size,labels, hu_mean 
    ├── Train_unlabeled_total.csv  // id, origin dataset, spacing, shape
    ├── readme.txt
    ├── val_public_total.csv  // id, origin dataset, spacing, abnormal or not
    └── val_public_tumor.csv  // id, tumor numbers, tumor size,labels, hu_mean