metadata
dataset_info:
- config_name: array
features:
- name: name
dtype: string
- name: structure
struct:
- name: coords
dtype:
array2_d:
shape:
- 3
dtype: float16
- name: restype_index
dtype:
array1_d:
shape: []
dtype: uint8
- name: chain_id
dtype:
array1_d:
shape: []
dtype: string
- name: b_factor
dtype:
array1_d:
shape: []
dtype: float16
splits:
- name: train
num_bytes: 219068945
num_examples: 8726
download_size: 119721904
dataset_size: 219068945
bio_features:
- name: name
dtype: string
- name: structure
dtype:
protein_atom_array_feature:
residue_dictionary:
residue_names:
- ALA
- ARG
- ASN
- ASP
- CYS
- GLN
- GLU
- GLY
- HIS
- ILE
- LEU
- LYS
- MET
- PHE
- PRO
- SER
- THR
- TRP
- TYR
- VAL
- UNK
residue_types:
- A
- R
- 'N'
- D
- C
- Q
- E
- G
- H
- I
- L
- K
- M
- F
- P
- S
- T
- W
- 'Y'
- V
- X
atom_types:
- 'N'
- CA
- C
- CB
- O
- CG
- CG1
- CG2
- OG
- OG1
- SG
- CD
- CD1
- CD2
- ND1
- ND2
- OD1
- OD2
- SD
- CE
- CE1
- CE2
- CE3
- NE
- NE1
- NE2
- OE1
- OE2
- CH2
- NH1
- NH2
- OH
- CZ
- CZ2
- CZ3
- NZ
- OXT
residue_atoms:
ALA:
- 'N'
- CA
- C
- O
- CB
ARG:
- 'N'
- CA
- C
- O
- CB
- CG
- CD
- NE
- CZ
- NH1
- NH2
ASP:
- 'N'
- CA
- C
- O
- CB
- CG
- OD1
- OD2
ASN:
- 'N'
- CA
- C
- O
- CB
- CG
- OD1
- ND2
CYS:
- 'N'
- CA
- C
- O
- CB
- SG
SEC:
- 'N'
- CA
- C
- O
- CB
- SE
GLU:
- 'N'
- CA
- C
- O
- CB
- CG
- CD
- OE1
- OE2
GLN:
- 'N'
- CA
- C
- O
- CB
- CG
- CD
- OE1
- NE2
GLY:
- 'N'
- CA
- C
- O
HIS:
- 'N'
- CA
- C
- O
- CB
- CG
- ND1
- CE1
- NE2
- CD2
ILE:
- 'N'
- CA
- C
- O
- CB
- CG1
- CG2
- CD1
LEU:
- 'N'
- CA
- C
- O
- CB
- CG
- CD1
- CD2
LYS:
- 'N'
- CA
- C
- O
- CB
- CG
- CD
- CE
- NZ
MET:
- 'N'
- CA
- C
- O
- CB
- CG
- SD
- CE
MSE:
- 'N'
- CA
- C
- O
- CB
- CG
- SE
- CE
PHE:
- 'N'
- CA
- C
- O
- CB
- CG
- CD1
- CD2
- CE1
- CE2
- CZ
PRO:
- 'N'
- CA
- C
- O
- CB
- CG
- CD
SER:
- 'N'
- CA
- C
- O
- CB
- OG
THR:
- 'N'
- CA
- C
- O
- CB
- OG1
- CG2
TRP:
- 'N'
- CA
- C
- O
- CB
- CG
- CD1
- NE1
- CE2
- CD2
- CE3
- CZ2
- CZ3
- CH2
TYR:
- 'N'
- CA
- C
- O
- CB
- CG
- CD1
- CD2
- CE1
- CE2
- CZ
- OH
VAL:
- 'N'
- CA
- C
- O
- CB
- CG1
- CG2
UNK:
- 'N'
- CA
- C
- O
backbone_atoms:
- 'N'
- CA
- C
- O
unknown_residue_name: UNK
conversions:
- residue: MSE
to_residue: MET
atom_swaps:
- - SE
- SD
- residue: SEC
to_residue: CYS
atom_swaps:
- - SE
- SG
all_atoms_present: true
coords_dtype: float16
b_factor_is_plddt: true
b_factor_dtype: float16
chain_id: A
with_b_factor: true
- config_name: default
features:
- name: name
dtype: string
- name: structure
dtype:
protein_structure_feature:
with_b_factor: true
splits:
- name: train
num_bytes: 43892127
num_examples: 8726
download_size: 43441782
dataset_size: 43892127
configs:
- config_name: array
data_files:
- split: train
path: array/train-*
- config_name: default
data_files:
- split: train
path: data/train-*