chromosome
stringclasses
1 value
start_position
int64
10k
6.9M
end_position
int64
10.5k
6.9M
computational_method
stringclasses
1 value
period_size
int64
1
12
copy_number
float64
2.1
884
consensus_size
int64
1
14
percent_matches
int64
61
100
percent_indels
int64
0
33
score
int64
50
1.2k
A
int64
0
100
C
int64
0
81
G
int64
0
84
T
int64
0
100
entropy_0-2
float64
0
2
sequence
stringlengths
1
14
chr1
10,000
10,468
trf
6
77.2
6
95
3
789
33
51
0
15
1.43
TAACCC
chr1
30,862
30,959
trf
2
47.5
2
75
8
79
5
42
1
51
1.31
TC
chr1
44,835
44,876
trf
4
10
4
94
5
73
73
0
0
26
0.84
AAAT
chr1
50,481
50,513
trf
2
16
2
100
0
64
0
0
50
50
1
GT
chr1
54,712
54,817
trf
4
25.8
4
87
7
149
0
26
0
72
0.91
TTTC
chr1
66,159
66,629
trf
7
68.1
7
72
18
278
49
0
0
49
1.08
TTATATA
chr1
66,160
66,630
trf
2
262
2
71
21
339
49
0
0
49
1.08
TA
chr1
66,204
66,632
trf
5
87.4
5
73
16
202
50
0
0
48
1.06
ATATA
chr1
72,124
72,164
trf
12
3.3
12
89
0
62
50
20
0
30
1.49
ATATATACATAC
chr1
72,128
72,163
trf
4
8.8
4
87
0
52
51
22
0
25
1.48
ATAC
chr1
83,791
84,041
trf
4
64.8
4
86
11
335
72
0
28
0
0.86
AAAG
chr1
98,999
99,042
trf
4
10.8
4
100
0
86
23
0
0
76
0.78
TTTA
chr1
99,046
99,116
trf
1
70
1
76
0
68
0
11
0
88
0.51
T
chr1
99,047
99,115
trf
12
5.9
11
83
16
77
0
11
0
88
0.52
TTTTTTTTTTC
chr1
104,160
104,196
trf
2
18
2
94
0
63
50
47
0
2
1.15
AC
chr1
108,444
108,469
trf
11
2.3
11
100
0
50
28
16
32
24
1.96
GAGGATCACTT
chr1
109,564
109,614
trf
2
25
2
91
0
82
2
2
48
48
1.24
TG
chr1
120,967
121,135
trf
7
23.1
7
77
17
150
41
3
1
53
1.29
TTATATA
chr1
120,968
121,135
trf
11
15.3
11
76
13
159
41
3
1
53
1.29
TATATATTATA
chr1
120,968
121,135
trf
9
17.6
9
74
21
137
41
3
1
53
1.29
TATATATTA
chr1
134,065
134,094
trf
1
29
1
100
0
58
0
0
0
100
0
T
chr1
144,527
144,576
trf
2
24.5
2
100
0
98
48
0
0
51
1
TA
chr1
147,433
147,475
trf
3
14
3
89
0
66
71
28
0
0
0.86
CAA
chr1
158,997
159,031
trf
2
17
2
93
0
59
52
47
0
0
1
AC
chr1
162,180
162,275
trf
4
23
4
72
10
66
51
0
48
0
1
AAGG
chr1
162,196
162,325
trf
8
16.1
8
76
13
97
45
0
54
0
0.99
AAGGAGGG
chr1
162,287
162,344
trf
4
14.2
4
84
0
69
33
0
66
0
0.92
GAGG
chr1
174,902
174,933
trf
1
31
1
100
0
62
100
0
0
0
0
A
chr1
176,202
176,231
trf
5
5.8
5
100
0
58
82
17
0
0
0.66
AAAAC
chr1
180,088
180,998
trf
6
146.8
6
82
9
899
31
48
1
17
1.58
ACCCTA
chr1
201,376
201,479
trf
2
50.5
2
79
7
100
4
42
0
52
1.22
TC
chr1
271,385
271,410
trf
5
5
5
100
0
50
0
20
0
80
0.72
CTTTT
chr1
271,386
271,429
trf
10
4.2
10
83
13
52
0
11
0
88
0.52
TTTTCTTTTT
chr1
275,583
275,614
trf
4
7.8
4
100
0
62
22
0
0
77
0.77
TTTA
chr1
275,618
275,679
trf
1
61
1
73
0
50
0
13
0
86
0.56
T
chr1
275,619
275,677
trf
12
4.9
11
80
19
64
0
13
0
86
0.58
TTTTTTTTTTC
chr1
280,726
280,760
trf
2
17
2
93
0
59
50
47
0
2
1.16
AC
chr1
285,008
285,033
trf
11
2.3
11
100
0
50
28
16
32
24
1.96
GAGGATCACTT
chr1
286,134
286,178
trf
2
22
2
85
0
61
4
2
45
47
1.35
TG
chr1
297,538
297,674
trf
2
76.5
2
68
22
90
41
3
1
52
1.28
TA
chr1
297,546
297,674
trf
7
17.4
7
75
16
109
42
3
1
53
1.26
TATTATA
chr1
360,788
360,816
trf
12
2.3
12
100
0
56
28
25
21
25
1.99
ATCAGCCTGGTA
chr1
367,998
368,050
trf
10
4.6
11
77
17
54
44
38
1
15
1.58
TACACACATCA
chr1
370,612
370,656
trf
4
9.8
5
88
11
53
0
15
0
84
0.63
TTTTC
chr1
370,612
370,656
trf
9
4.4
9
79
20
52
0
15
0
84
0.63
TTTTCTTTT
chr1
371,008
371,037
trf
5
5.8
5
100
0
58
0
0
17
82
0.66
TTTTG
chr1
371,274
371,314
trf
2
20
2
84
0
53
5
2
45
47
1.38
TG
chr1
373,984
374,164
trf
12
14.8
12
71
9
105
4
57
0
37
1.23
TCTCCTTTCTCC
chr1
393,781
393,807
trf
2
13
2
100
0
52
0
0
50
50
1
GT
chr1
394,541
394,646
trf
4
26.2
4
84
0
75
37
2
60
0
1.12
AGGG
chr1
396,748
396,776
trf
1
28
1
100
0
56
0
0
0
100
0
T
chr1
396,901
396,941
trf
2
20
2
100
0
80
0
0
50
50
1
GT
chr1
409,436
409,471
trf
4
8.8
4
87
0
52
22
2
2
71
1.13
TTTA
chr1
409,468
409,510
trf
12
3.4
12
81
15
50
0
19
0
80
0.7
TTTTTCCTTCTT
chr1
414,629
414,675
trf
2
23
2
100
0
92
50
50
0
0
1
AC
chr1
417,892
418,051
trf
4
39.2
4
85
12
218
72
0
27
0
0.84
AGAA
chr1
432,155
432,300
trf
2
73.5
2
74
5
80
47
10
3
38
1.55
AT
chr1
432,159
432,302
trf
10
14.1
10
75
11
94
47
11
3
37
1.56
ATATATATAC
chr1
476,980
477,150
trf
7
23.1
7
76
18
136
41
3
1
53
1.25
TTATATA
chr1
490,052
490,077
trf
1
25
1
100
0
50
0
0
0
100
0
T
chr1
503,138
503,172
trf
2
17
2
100
0
68
50
0
0
50
1
TA
chr1
506,032
506,073
trf
3
13.7
3
84
0
55
73
24
0
2
0.96
AAC
chr1
517,589
517,629
trf
2
20
2
94
0
71
52
47
0
0
1
AC
chr1
520,776
520,871
trf
4
23
4
72
10
66
51
0
48
0
1
AAGG
chr1
520,792
520,921
trf
8
16.1
8
76
13
97
45
0
54
0
0.99
AAGGAGGG
chr1
520,883
520,940
trf
4
14.2
4
84
0
69
33
0
66
0
0.92
GAGG
chr1
533,492
533,520
trf
1
28
1
100
0
56
100
0
0
0
0
A
chr1
534,789
534,818
trf
5
5.8
5
100
0
58
82
17
0
0
0.66
AAAAC
chr1
597,051
597,101
trf
10
5
10
80
0
64
44
38
2
16
1.59
TACACACTCA
chr1
599,287
599,327
trf
5
8.8
5
89
10
52
0
17
0
82
0.67
TTTTC
chr1
599,287
599,330
trf
9
4.3
9
78
21
50
0
16
0
83
0.64
TTTTCTTTT
chr1
599,682
599,711
trf
5
5.8
5
100
0
58
0
0
17
82
0.66
TTTTG
chr1
599,948
599,988
trf
2
20
2
84
0
53
5
2
45
47
1.38
TG
chr1
602,209
602,359
trf
12
12.5
12
77
2
158
5
60
0
33
1.24
CTCTCCATCCCC
chr1
623,671
623,699
trf
2
14
2
100
0
56
0
0
50
50
1
GT
chr1
624,433
624,534
trf
4
25.2
4
83
0
67
37
2
59
0
1.13
AGGG
chr1
626,781
626,821
trf
2
20
2
100
0
80
0
0
50
50
1
GT
chr1
645,187
645,222
trf
4
8.8
4
87
0
52
22
2
2
71
1.13
TTTA
chr1
645,219
645,261
trf
12
3.4
12
81
15
50
0
19
0
80
0.7
TTTTTCCTTCTT
chr1
650,383
650,423
trf
2
20
2
100
0
80
50
50
0
0
1
AC
chr1
653,639
653,790
trf
4
38.2
4
84
12
206
72
0
27
0
0.84
AGAA
chr1
667,897
668,052
trf
12
12.2
12
76
12
107
47
10
3
38
1.54
ATATACATATAT
chr1
667,897
668,052
trf
2
78.5
2
74
5
91
47
10
3
38
1.54
AT
chr1
667,899
668,054
trf
10
15.1
10
74
12
109
47
10
3
38
1.55
ATATATATAC
chr1
711,957
712,094
trf
7
19.1
7
75
19
115
40
3
1
54
1.27
TTATATA
chr1
711,958
712,094
trf
2
75.5
2
71
20
104
41
3
1
53
1.27
TA
chr1
711,962
712,095
trf
11
12
11
78
13
130
40
4
1
53
1.3
TATTATATATC
chr1
725,051
725,080
trf
1
29
1
100
0
58
0
0
0
100
0
T
chr1
747,743
747,784
trf
3
13.7
3
84
0
55
73
24
0
2
0.96
AAC
chr1
759,446
759,498
trf
2
26
2
96
0
95
51
48
0
0
1
AC
chr1
762,644
762,739
trf
4
23
4
75
10
75
52
0
47
0
1
AAGG
chr1
762,660
762,809
trf
8
18.5
8
76
12
110
44
0
55
0
0.99
AAGGAGGG
chr1
762,751
762,804
trf
4
13.2
4
83
0
70
32
0
67
0
0.91
GAGG
chr1
776,604
776,633
trf
5
5.8
5
100
0
58
82
17
0
0
0.66
AAAAC
chr1
788,368
788,435
trf
2
34.5
2
72
14
52
47
2
47
1
1.26
AG
chr1
791,052
791,098
trf
5
8.5
6
86
13
57
30
0
54
15
1.41
GGAATG
chr1
808,289
808,338
trf
7
6.4
8
80
15
59
51
38
0
10
1.36
ACATACAC
chr1
832,736
832,781
trf
5
9
5
100
0
90
0
0
20
80
0.72
GTTTT
chr1
860,178
860,211
trf
1
33
1
100
0
66
0
0
0
100
0
T
chr1
861,778
862,160
trf
11
35.5
11
72
14
178
37
1
32
28
1.64
ATAGATGATAG
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