Add a model card to BarcodeMamba models

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by GTCtech - opened
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  *.zip filter=lfs diff=lfs merge=lfs -text
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+ BarcodeMamba[[:space:]]Poster.png filter=lfs diff=lfs merge=lfs -text
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+ BarcodeMamba_Poster.pdf filter=lfs diff=lfs merge=lfs -text
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- ---
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- license: mit
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- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ ---
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+ license: mit
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+ ---
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+
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+ # BarcodeMamba for Taxonomic Classification
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+
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+ A performant and efficient Mamba-2-based foundation model for DNA barcodes in biodiversity analysis.
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+
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+ - Check out our [paper](https://openreview.net/forum?id=6ohFEFTr10)
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+ - Check out our [poster](https://neurips.cc/media/PosterPDFs/NeurIPS%202024/105938.png)
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+
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+ # Usage
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+ The pretrained models can be used for both taxonomic classification on seen species (fine-tune & linear probe) and making genus-level predictions on unseen species (1-NN probe). The instructions for using our models can be found at our [GitHub repository](https://github.com/bioscan-ml/BarcodeMamba).
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+
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+ # Citation
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+
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+ If you find BarcodeMamba useful, please consider citing:
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+ ```
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+ @inproceedings{
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+ gao2024barcodemamba,
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+ title={BarcodeMamba: State Space Models for Biodiversity Analysis},
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+ author={Tiancheng Gao and Graham W.~Taylor},
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+ booktitle={{NeurIPS} 2024 Workshop on Foundation Models for Science: Progress, Opportunities, and Challenges},
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+ year={2024},
poster/BarcodeMamba Poster.png ADDED

Git LFS Details

  • SHA256: ebc9f295a430fc309ba18f837a74176c92363584c14c01f317ff3cce0eab6482
  • Pointer size: 132 Bytes
  • Size of remote file: 5.8 MB
poster/BarcodeMamba_Poster.pdf ADDED
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