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Example Usage

from transformers import AutoTokenizer, T5ForConditionalGeneration

tokenizer = AutoTokenizer.from_pretrained("QizhiPei/biot5-base-human-ppi", model_max_length=512)
model = T5ForConditionalGeneration.from_pretrained('QizhiPei/biot5-base-human-ppi')

References

For more information, please refer to our paper and GitHub repository.

Paper: BioT5: Enriching Cross-modal Integration in Biology with Chemical Knowledge and Natural Language Associations

GitHub: BioT5

Authors: Qizhi Pei, Wei Zhang, Jinhua Zhu, Kehan Wu, Kaiyuan Gao, Lijun Wu, Yingce Xia, and Rui Yan

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Dataset used to train QizhiPei/biot5-base-peer-human_ppi