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tsantosh7
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en_BiomedNER_EuropePMC

Token Classification
spaCy
English
Eval Results
Model card Files Community
en_BiomedNER_EuropePMC
File size: 1,334 Bytes 
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{
  "lang":"en",
  "name":"BiomedNER_EuropePMC",
  "version":"1.0.0",
  "description":"Bio Named Entity Recognition using BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext",
  "author":"Santosh Tirunagari",
  "email":"[email protected]",
  "url":"https://europepmc.org/",
  "license":"",
  "spacy_version":">=3.2.4,<3.3.0",
  "spacy_git_version":"b50fe5ec6",
  "vectors":{
    "width":0,
    "vectors":0,
    "keys":0,
    "name":null
  },
  "labels":{
    "transformer":[

    ],
    "ner":[
      "CD",
      "DS",
      "GP",
      "OG"
    ]
  },
  "pipeline":[
    "transformer",
    "ner"
  ],
  "components":[
    "transformer",
    "ner"
  ],
  "disabled":[

  ],
  "performance":{
    "ents_f":0.8882175227,
    "ents_p":0.871384947,
    "ents_r":0.9057132188,
    "ents_per_type":{
      "DS":{
        "p":0.873221216,
        "r":0.8494127517,
        "f":0.8611524559
      },
      "CD":{
        "p":0.8980716253,
        "r":0.9080779944,
        "f":0.9030470914
      },
      "GP":{
        "p":0.8360271726,
        "r":0.908373632,
        "f":0.8707001708
      },
      "OG":{
        "p":0.9062702004,
        "r":0.9463381708,
        "f":0.9258708932
      }
    },
    "transformer_loss":922.9180910581,
    "ner_loss":1097.5502712241
  },
  "requirements":[
    "spacy-transformers>=1.1.5,<1.2.0"
  ]
}