topic_modelling / funcs /embeddings.py
seanpedrickcase's picture
Rearranged functions for embeddings creation to be compatible with zero GPU space. Updated packages.
cc495e1
import time
import numpy as np
import os
import spaces
from torch import cuda, backends, version
from sentence_transformers import SentenceTransformer
from sklearn.pipeline import make_pipeline
from sklearn.decomposition import TruncatedSVD
from sklearn.feature_extraction.text import TfidfVectorizer
# Check for torch cuda
# If you want to disable cuda for testing purposes
#os.environ['CUDA_VISIBLE_DEVICES'] = '-1'
print("Is CUDA enabled? ", cuda.is_available())
print("Is a CUDA device available on this computer?", backends.cudnn.enabled)
if cuda.is_available():
torch_device = "gpu"
print("Cuda version installed is: ", version.cuda)
high_quality_mode = "Yes"
os.system("nvidia-smi")
else:
torch_device = "cpu"
high_quality_mode = "No"
@spaces.GPU
def make_or_load_embeddings(docs: list, file_list: list, embeddings_out: np.ndarray, embeddings_super_compress: str, high_quality_mode_opt: str, embeddings_name:str="mixedbread-ai/mxbai-embed-xsmall-v1") -> np.ndarray:
"""
Create or load embeddings for the given documents.
Args:
docs (list): List of documents to embed.
file_list (list): List of file names to check for existing embeddings.
embeddings_out (np.ndarray): Array to store the embeddings.
embeddings_super_compress (str): Option to super compress embeddings ("Yes" or "No").
high_quality_mode_opt (str): Option for high quality mode ("Yes" or "No").
Returns:
np.ndarray: The generated or loaded embeddings.
"""
if high_quality_mode_opt == "Yes":
# Define a list of possible local locations to search for the model
local_embeddings_locations = [
"model/embed/", # Potential local location
"/model/embed/", # Potential location in Docker container
"/home/user/app/model/embed/" # This is inside a Docker container
]
# Attempt to load the model from each local location
for location in local_embeddings_locations:
try:
embedding_model = SentenceTransformer(location)#, truncate_dim=512)
print(f"Found local model installation at: {location}")
break # Exit the loop if the model is found
except Exception as e:
print(f"Failed to load model from {location}: {e}")
continue
else:
# If the loop completes without finding the model in any local location
embedding_model = SentenceTransformer(embeddings_name)#, truncate_dim=512)
print("Could not find local model installation. Downloading from Huggingface")
else:
embedding_model = make_pipeline(
TfidfVectorizer(),
TruncatedSVD(100, random_state=random_seed)
)
# If no embeddings found, make or load in
if embeddings_out.size == 0:
print("Embeddings not found. Loading or generating new ones.")
embeddings_file_names = [string for string in file_list if "embedding" in string.lower()]
if embeddings_file_names:
embeddings_file_name = embeddings_file_names[0]
print("Loading embeddings from file.")
embeddings_out = np.load(embeddings_file_name)['arr_0']
# If embedding files have 'super_compress' in the title, they have been multiplied by 100 before save
if "compress" in embeddings_file_name:
embeddings_out /= 100
if not embeddings_file_names:
tic = time.perf_counter()
print("Starting to embed documents.")
# Custom model
# If on CPU, don't resort to embedding models
if high_quality_mode_opt == "No":
print("Creating simplified 'sparse' embeddings based on TfIDF")
# Fit the pipeline to the text data
embedding_model.fit(docs)
# Transform text data to embeddings
embeddings_out = embedding_model.transform(docs)
elif high_quality_mode_opt == "Yes":
print("Creating dense embeddings based on transformers model")
# Convert model to half precision (fp16)
embedding_model.half()
embeddings_out = embedding_model.encode(sentences=docs, show_progress_bar = True, batch_size = 32)#, precision="int8") # For large
toc = time.perf_counter()
time_out = f"The embedding took {toc - tic:0.1f} seconds"
print(time_out)
# If the user has chosen to go with super compressed embedding files to save disk space
if embeddings_super_compress == "Yes":
embeddings_out = np.round(embeddings_out, 3)
embeddings_out *= 100
return embeddings_out, embedding_model
else:
print("Found pre-loaded embeddings.")
return embeddings_out, embedding_model