topic_modelling / funcs /aws_functions.py
seanpedrickcase's picture
Added example of how to run function from command line. Updated packages. Embedding model default now smaller and at fp16.
34f1e83
from typing import Type, List
import pandas as pd
import boto3
import tempfile
import os
from funcs.helper_functions import get_or_create_env_var
PandasDataFrame = Type[pd.DataFrame]
# Get AWS credentials
bucket_name=""
RUN_AWS_FUNCTIONS = get_or_create_env_var("RUN_AWS_FUNCTIONS", "0")
print(f'The value of RUN_AWS_FUNCTIONS is {RUN_AWS_FUNCTIONS}')
AWS_REGION = get_or_create_env_var('AWS_REGION', 'eu-west-2')
print(f'The value of AWS_REGION is {AWS_REGION}')
def get_assumed_role_info():
sts_endpoint = 'https://sts.' + AWS_REGION + '.amazonaws.com'
sts = boto3.client('sts', region_name=AWS_REGION, endpoint_url=sts_endpoint)
response = sts.get_caller_identity()
# Extract ARN of the assumed role
assumed_role_arn = response['Arn']
# Extract the name of the assumed role from the ARN
assumed_role_name = assumed_role_arn.split('/')[-1]
return assumed_role_arn, assumed_role_name
if RUN_AWS_FUNCTIONS == "1":
try:
bucket_name = os.environ['TOPIC_MODELLING_BUCKET']
session = boto3.Session()
except Exception as e:
print(e)
try:
assumed_role_arn, assumed_role_name = get_assumed_role_info()
print("Assumed Role ARN:", assumed_role_arn)
print("Assumed Role Name:", assumed_role_name)
except Exception as e:
print(e)
# Download direct from S3 - requires login credentials
def download_file_from_s3(bucket_name, key, local_file_path_and_name):
s3 = boto3.client('s3')
s3.download_file(bucket_name, key, local_file_path_and_name)
print(f"File downloaded from S3: s3://{bucket_name}/{key} to {local_file_path_and_name}")
def download_folder_from_s3(bucket_name, s3_folder, local_folder):
"""
Download all files from an S3 folder to a local folder.
"""
s3 = boto3.client('s3')
# List objects in the specified S3 folder
response = s3.list_objects_v2(Bucket=bucket_name, Prefix=s3_folder)
# Download each object
for obj in response.get('Contents', []):
# Extract object key and construct local file path
object_key = obj['Key']
local_file_path = os.path.join(local_folder, os.path.relpath(object_key, s3_folder))
# Create directories if necessary
os.makedirs(os.path.dirname(local_file_path), exist_ok=True)
# Download the object
try:
s3.download_file(bucket_name, object_key, local_file_path)
print(f"Downloaded 's3://{bucket_name}/{object_key}' to '{local_file_path}'")
except Exception as e:
print(f"Error downloading 's3://{bucket_name}/{object_key}':", e)
def download_files_from_s3(bucket_name, s3_folder, local_folder, filenames):
"""
Download specific files from an S3 folder to a local folder.
"""
s3 = boto3.client('s3')
print("Trying to download file: ", filenames)
if filenames == '*':
# List all objects in the S3 folder
print("Trying to download all files in AWS folder: ", s3_folder)
response = s3.list_objects_v2(Bucket=bucket_name, Prefix=s3_folder)
print("Found files in AWS folder: ", response.get('Contents', []))
filenames = [obj['Key'].split('/')[-1] for obj in response.get('Contents', [])]
print("Found filenames in AWS folder: ", filenames)
for filename in filenames:
object_key = os.path.join(s3_folder, filename)
local_file_path = os.path.join(local_folder, filename)
# Create directories if necessary
os.makedirs(os.path.dirname(local_file_path), exist_ok=True)
# Download the object
try:
s3.download_file(bucket_name, object_key, local_file_path)
print(f"Downloaded 's3://{bucket_name}/{object_key}' to '{local_file_path}'")
except Exception as e:
print(f"Error downloading 's3://{bucket_name}/{object_key}':", e)
def load_data_from_aws(in_aws_keyword_file, aws_password="", bucket_name=bucket_name):
temp_dir = tempfile.mkdtemp()
local_address_stub = temp_dir + '/topic-modelling/'
files = []
if not 'TEST_PASSWORD' in os.environ:
out_message = "Can't verify password for dataset access. Do you have a valid AWS connection? Data not loaded."
return files, out_message
if aws_password:
if "Test_file" in in_aws_keyword_file and aws_password == os.environ['TEST_PASSWORD']:
s3_folder_stub = 'example-data/test-data/latest/'
local_folder_path = local_address_stub
# Check if folder exists
if not os.path.exists(local_folder_path):
print(f"Folder {local_folder_path} does not exist! Making folder.")
os.mkdir(local_folder_path)
# Check if folder is empty
if len(os.listdir(local_folder_path)) == 0:
print(f"Folder {local_folder_path} is empty")
# Download data
download_files_from_s3(bucket_name, s3_folder_stub, local_folder_path, filenames='*')
print("AWS data downloaded")
else:
print(f"Folder {local_folder_path} is not empty")
#files = os.listdir(local_folder_stub)
#print(files)
files = [os.path.join(local_folder_path, f) for f in os.listdir(local_folder_path) if os.path.isfile(os.path.join(local_folder_path, f))]
out_message = "Data successfully loaded from AWS"
print(out_message)
else:
out_message = "Data not loaded from AWS"
print(out_message)
else:
out_message = "No password provided. Please ask the data team for access if you need this."
print(out_message)
return files, out_message
def upload_file_to_s3(local_file_paths:List[str], s3_key:str, s3_bucket:str=bucket_name):
"""
Uploads a file from local machine to Amazon S3.
Args:
- local_file_path: Local file path(s) of the file(s) to upload.
- s3_key: Key (path) to the file in the S3 bucket.
- s3_bucket: Name of the S3 bucket.
Returns:
- Message as variable/printed to console
"""
final_out_message = []
s3_client = boto3.client('s3')
if isinstance(local_file_paths, str):
local_file_paths = [local_file_paths]
for file in local_file_paths:
if s3_client:
#print(s3_client)
try:
# Get file name off file path
file_name = os.path.basename(file)
s3_key_full = s3_key + file_name
print("S3 key: ", s3_key_full)
s3_client.upload_file(file, s3_bucket, s3_key_full)
out_message = "File " + file_name + " uploaded successfully!"
print(out_message)
except Exception as e:
out_message = f"Error uploading file(s): {e}"
print(out_message)
final_out_message.append(out_message)
final_out_message_str = '\n'.join(final_out_message)
else: final_out_message_str = "Could not connect to AWS."
return final_out_message_str