report.py

import os
from collections import Counter
import numpy as np
import pandas as pd
import seaborn as sns
import matplotlib.pyplot as plt
from datetime import datetime

REPORT_DIR = f"cleaning_report_{datetime.now().strftime('%Y%m%d_%H%M%S')}"
os.makedirs(REPORT_DIR, exist_ok=True)

def save_plot(fig, filename):
 fig.savefig(os.path.join(REPORT_DIR, filename), dpi=400, bbox_inches='tight')
 plt.close(fig)

def plot_heatmap(df, title):
 # Calculate the percentage of null values for each column
 null_percentages = df.isnull().mean() * 100

 plt.figure(figsize=(12, 8))
 sns.heatmap(null_percentages.to_frame().T, cbar=True, cmap='Reds', annot=True, fmt='.1f')
 plt.title(title)
 plt.ylabel('Percentage of Missing Values')
 plt.tight_layout()
 save_plot(plt.gcf(), f'{title.lower().replace(" ", "_")}.png')

def plot_column_schemas(df):
 # Get the data types of all columns
 data_types = df.dtypes.astype(str).tolist()
 data_types = [dtype.capitalize() for dtype in data_types]

 # Count the occurrences of each data type
 type_counts = Counter(data_types)

 fig, ax = plt.subplots(figsize=(10, 6))

 # Generate a color palette with as many colors as there are bars
 colors = plt.cm.tab20(np.linspace(0, 1, len(type_counts)))

 # Plot the bars
 bars = ax.bar(type_counts.keys(), type_counts.values(), color=colors)

 ax.set_title('Column Data Types')
 ax.set_xlabel('Data Type')
 ax.set_ylabel('Count')

 # Add value labels on top of each bar
 for bar in bars:
 height = bar.get_height()
 ax.text(bar.get_x() + bar.get_width() / 2., height,
 f'{int(height)}',
 ha='center', va='bottom')

 plt.xticks(rotation=45)
 plt.tight_layout()
 save_plot(fig, 'column_schemas.png')

def plot_nonconforming_cells(nonconforming_cells):
 # Ensure that nonconforming_cells is a dictionary
 if isinstance(nonconforming_cells, dict):
 # Proceed with plotting if it's a dictionary
 fig, ax = plt.subplots(figsize=(12, 6))

 # Generate a color palette with as many colors as there are bars
 colors = plt.cm.rainbow(np.linspace(0, 1, len(nonconforming_cells)))

 # Plot the bars
 bars = ax.bar(list(nonconforming_cells.keys()), list(nonconforming_cells.values()), color=colors)

 ax.set_title('Nonconforming Cells by Column')
 ax.set_xlabel('Columns')
 ax.set_ylabel('Number of Nonconforming Cells')
 plt.xticks(rotation=90)

 # Add value labels on top of each bar
 for bar in bars:
 height = bar.get_height()
 ax.text(bar.get_x() + bar.get_width() / 2., height,
 f'{height:,}',
 ha='center', va='bottom')

 save_plot(fig, 'nonconforming_cells.png')
 else:
 print(f"Expected nonconforming_cells to be a dictionary, but got {type(nonconforming_cells)}.")

def plot_column_distributions(cleaned_df, primary_key_column):
 print("Plotting distribution charts for numeric columns in the cleaned DataFrame...")

 numeric_columns = cleaned_df.select_dtypes(include=[np.number]).columns.tolist()
 numeric_columns = [col for col in numeric_columns if col != primary_key_column]
 num_columns = len(numeric_columns)

 if num_columns == 0:
 print("No numeric columns found in the cleaned DataFrame for distribution plots.")
 return

 # Create subplots for distributions
 ncols = 3
 nrows = (num_columns + ncols - 1) // ncols # Ceiling division
 fig, axes = plt.subplots(nrows=nrows, ncols=ncols, figsize=(18, 5 * nrows))
 axes = axes.flatten() if num_columns > 1 else [axes]

 for i, column in enumerate(numeric_columns):
 cleaned_data = cleaned_df[column].dropna()

 sns.histplot(cleaned_data, ax=axes[i], kde=True, color='orange', label='After Cleaning', alpha=0.7)
 axes[i].set_title(f'{column} - Distribution After Cleaning')
 axes[i].legend()

 # Remove any unused subplots
 for j in range(i + 1, len(axes)):
 fig.delaxes(axes[j])

 plt.tight_layout()
 save_plot(fig, 'distributions_after_cleaning.png')

def plot_boxplot_with_outliers(original_df, primary_key_column):
 print("Plotting boxplots for numeric columns in the original DataFrame...")

 numeric_columns = original_df.select_dtypes(include=[np.number]).columns.tolist()
 numeric_columns = [col for col in numeric_columns if col != primary_key_column]
 num_columns = len(numeric_columns)

 if num_columns == 0:
 print("No numeric columns found in the original DataFrame for boxplots.")
 return

 # Create subplots based on the number of numeric columns
 ncols = 3
 nrows = (num_columns + ncols - 1) // ncols # Ceiling division
 fig, axes = plt.subplots(nrows=nrows, ncols=ncols, figsize=(18, 5 * nrows))
 axes = axes.flatten() if num_columns > 1 else [axes]

 for i, column in enumerate(numeric_columns):
 data = original_df[column].dropna()

 sns.boxplot(x=data, ax=axes[i], color='blue', orient='h')
 axes[i].set_title(f'Boxplot of {column} (Before Cleaning)')

 # Remove any unused subplots
 for j in range(i + 1, len(axes)):
 fig.delaxes(axes[j])

 plt.tight_layout()
 save_plot(fig, 'boxplots_before_cleaning.png')

def plot_correlation_heatmap(df, primary_key_column):
 numeric_columns = df.select_dtypes(include=[np.number]).columns.tolist()
 numeric_columns = [col for col in numeric_columns if col != primary_key_column]

 if not numeric_columns:
 print("No numeric columns found for correlation heatmap.")
 return

 corr_matrix = df[numeric_columns].corr()

 plt.figure(figsize=(15, 10))
 sns.heatmap(corr_matrix, annot=True, fmt=".2f", cmap='coolwarm', cbar_kws={'label': 'Correlation'})
 plt.title('Correlation Heatmap')
 plt.tight_layout()
 save_plot(plt.gcf(), 'correlation_heatmap.png')

def plot_process_times(process_times):
 # Convert seconds to minutes
 process_times_minutes = {k: v / 60 for k, v in process_times.items()}

 # Separate main processes and column cleaning processes
 main_processes = {k: v for k, v in process_times_minutes.items() if not k.startswith("Clean column:")}
 column_processes = {k: v for k, v in process_times_minutes.items() if k.startswith("Clean column:")}

 # Create the plot
 fig, (ax1, ax2) = plt.subplots(2, 1, figsize=(15, 10))

 # Plot main processes
 bars1 = ax1.bar(main_processes.keys(), main_processes.values())
 ax1.set_title('Main Process Times')
 ax1.set_ylabel('Time (minutes)')
 ax1.tick_params(axis='x', rotation=45)

 # Plot column cleaning processes
 bars2 = ax2.bar(column_processes.keys(), column_processes.values())
 ax2.set_title('Column Cleaning Times')
 ax2.set_ylabel('Time (minutes)')
 ax2.tick_params(axis='x', rotation=90)

 # Add value labels on top of each bar with 3 decimal places
 for ax, bars in zip([ax1, ax2], [bars1, bars2]):
 for bar in bars:
 height = bar.get_height()
 ax.text(bar.get_x() + bar.get_width() / 2., height,
 f'{height:.4f}', ha='center', va='bottom')

 # Add total time to the plot with 3 decimal places
 total_time = sum(process_times_minutes.values())
 fig.suptitle(f'Process Times (Total: {total_time:.3f} minutes)', fontsize=16)

 plt.tight_layout()
 save_plot(fig, 'process_times.png')

def create_full_report(original_df, cleaned_df, nonconforming_cells_before, process_times, removed_columns,
 removed_rows, primary_key_column):
 os.makedirs(REPORT_DIR, exist_ok=True)

 sns.set_style("whitegrid")
 plt.rcParams['figure.dpi'] = 400

 print("Plotting nonconforming cells before cleaning...")
 plot_nonconforming_cells(nonconforming_cells_before)

 print("Plotting column distributions...")
 plot_column_distributions(cleaned_df, primary_key_column)

 print("Plotting boxplots for original data...")
 plot_boxplot_with_outliers(original_df, primary_key_column)

 print("Plotting process times...")
 plot_process_times(process_times)

 print("Plotting heatmaps...")
 plot_heatmap(original_df, "Missing Values Before Cleaning")

 print("Plotting correlation heatmap...")
 plot_correlation_heatmap(cleaned_df, primary_key_column)

 print("Plotting column schemas...")
 plot_column_schemas(cleaned_df)

 print(f"All visualization reports saved in directory: {REPORT_DIR}")