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pandas numpy lmdb # python-lmdb # git+https://github.com/jnwatson/py-lmdb.git git+https://github.com/microsoft/protein-sequence-models.git mlflow scikit-learn seaborn blosum matplotlib fair-esm biotite tqdm git+https://github.com/HeliXonProtein/OmegaFold.git mdanalysis pdb-tools evodiff -r torch_requirements.txt |