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ribesstefano commited on
Commit
e891c67
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1 Parent(s): c8d51e3

Improved plotting

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Files changed (14) hide show
  1. plots/ablation_study_random.pdf +0 -0
  2. plots/ablation_study_tanimoto.pdf +0 -0
  3. plots/ablation_study_uniprot.pdf +0 -0
  4. plots/{Active_Dmax_0.6_pDC50_6.0_metrics_majority_vote_best_models.pdf → majority_vote_performance-best_models_as_test.pdf} +0 -0
  5. plots/{Active_Dmax_0.6_pDC50_6.0_metrics_majority_vote_cv_models.pdf → majority_vote_performance-cv_models_as_test.pdf} +0 -0
  6. plots/{Active_Dmax_0.6_pDC50_6.0_metrics.pdf → mean_performance-best_models_as_test.pdf} +0 -0
  7. plots/mean_performance-cv_models_as_test.pdf +0 -0
  8. plots/training_metrics_random_best_model.pdf +0 -0
  9. plots/training_metrics_random_cv_model.pdf +0 -0
  10. plots/training_metrics_tanimoto_best_model.pdf +0 -0
  11. plots/training_metrics_tanimoto_cv_model.pdf +0 -0
  12. plots/training_metrics_uniprot_best_model.pdf +0 -0
  13. plots/training_metrics_uniprot_cv_model.pdf +0 -0
  14. src/plot_experiment_results.py +9 -3
plots/ablation_study_random.pdf CHANGED
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plots/ablation_study_tanimoto.pdf CHANGED
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plots/ablation_study_uniprot.pdf CHANGED
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plots/{Active_Dmax_0.6_pDC50_6.0_metrics_majority_vote_best_models.pdf → majority_vote_performance-best_models_as_test.pdf} RENAMED
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plots/{Active_Dmax_0.6_pDC50_6.0_metrics_majority_vote_cv_models.pdf → majority_vote_performance-cv_models_as_test.pdf} RENAMED
Binary files a/plots/Active_Dmax_0.6_pDC50_6.0_metrics_majority_vote_cv_models.pdf and b/plots/majority_vote_performance-cv_models_as_test.pdf differ
 
plots/{Active_Dmax_0.6_pDC50_6.0_metrics.pdf → mean_performance-best_models_as_test.pdf} RENAMED
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plots/mean_performance-cv_models_as_test.pdf ADDED
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plots/training_metrics_random_best_model.pdf CHANGED
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plots/training_metrics_random_cv_model.pdf CHANGED
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plots/training_metrics_tanimoto_best_model.pdf CHANGED
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plots/training_metrics_tanimoto_cv_model.pdf CHANGED
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plots/training_metrics_uniprot_best_model.pdf CHANGED
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plots/training_metrics_uniprot_cv_model.pdf CHANGED
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src/plot_experiment_results.py CHANGED
@@ -359,19 +359,25 @@ def main():
359
  plot_performance_metrics(
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  reports['cv_train'],
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  reports['test'],
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- title=f'{active_name}_metrics',
 
 
 
 
 
 
363
  )
364
 
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  plot_performance_metrics(
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  reports['cv_train'],
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  reports['majority_vote'][reports['majority_vote']['cv_models'].isna()],
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- title=f'{active_name}_metrics_majority_vote_best_models',
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  )
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  plot_performance_metrics(
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  reports['cv_train'],
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  reports['majority_vote'][reports['majority_vote']['cv_models'] == True],
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- title=f'{active_name}_metrics_majority_vote_cv_models',
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  )
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  # plot_majority_voting_performance(reports['majority_vote'])
 
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  plot_performance_metrics(
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  reports['cv_train'],
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  reports['test'],
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+ title=f'mean_performance-best_models_as_test',
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+ )
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+
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+ plot_performance_metrics(
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+ reports['cv_train'],
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+ reports['cv_train'],
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+ title=f'mean_performance-cv_models_as_test',
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  )
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  plot_performance_metrics(
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  reports['cv_train'],
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  reports['majority_vote'][reports['majority_vote']['cv_models'].isna()],
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+ title=f'majority_vote_performance-best_models_as_test',
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  )
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  plot_performance_metrics(
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  reports['cv_train'],
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  reports['majority_vote'][reports['majority_vote']['cv_models'] == True],
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+ title=f'majority_vote_performance-cv_models_as_test',
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  )
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  # plot_majority_voting_performance(reports['majority_vote'])