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Sleeping
ariankhalfani
commited on
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•
dc36253
1
Parent(s):
5a80261
Update app.py
Browse files
app.py
CHANGED
@@ -4,15 +4,14 @@ import cv2
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import numpy as np
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from PIL import Image, ImageDraw, ImageFont
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import sqlite3
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import pandas as pd
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# Load
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model = YOLO("best.pt")
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# Define label mappings
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label_mapping = {0: 'immature', 1: 'mature', 2: 'normal'}
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inverse_label_mapping = {'immature': 0, 'mature': 1, 'normal': 2}
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# Function to perform prediction
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def predict_image(input_image, name, patient_id):
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if input_image is None:
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@@ -27,73 +26,240 @@ def predict_image(input_image, name, patient_id):
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elif image_np.shape[2] == 4: # RGBA to RGB
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image_np = cv2.cvtColor(image_np, cv2.COLOR_RGBA2RGB)
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# Perform
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results = model(image_np)
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# Draw bounding boxes on the image
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image_with_boxes = image_np.copy()
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raw_predictions = []
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if results[0].boxes:
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predicted_class = int(box.cls.item())
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confidence = box.conf.item()
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#
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if
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color = (0, 255, 0)
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pil_image_with_boxes = Image.fromarray(image_with_boxes)
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# Gradio Interface
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def interface(name, patient_id, input_image):
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if input_image is None:
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return "Please upload an image."
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# Run prediction
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output_image, raw_result = predict_image(input_image, name, patient_id)
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# Gradio Blocks
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with gr.Blocks() as demo:
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with gr.
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gr.
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raw_result = gr.Textbox(label="Raw Result", lines=5)
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# Launch the Gradio app
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demo.launch()
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import numpy as np
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from PIL import Image, ImageDraw, ImageFont
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import sqlite3
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import base64
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from io import BytesIO
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import tempfile
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import pandas as pd
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# Load YOLOv8 model
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model = YOLO("best.pt")
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# Function to perform prediction
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def predict_image(input_image, name, patient_id):
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if input_image is None:
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elif image_np.shape[2] == 4: # RGBA to RGB
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image_np = cv2.cvtColor(image_np, cv2.COLOR_RGBA2RGB)
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# Perform prediction
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results = model(image_np)
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# Draw bounding boxes on the image
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image_with_boxes = image_np.copy()
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raw_predictions = []
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label = "Unknown" # Default label if no detection
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if results[0].boxes:
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for box in results[0].boxes:
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# Get class index and confidence for each detection
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class_index = box.cls.item()
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confidence = box.conf.item()
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# Determine the label based on the class index
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if class_index == 0:
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label = "Mature"
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color = (255, 0, 0) # Red for Mature
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elif class_index == 1:
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label = "Immature"
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color = (0, 255, 255) # Yellow for Immature
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else:
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label = "Normal"
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color = (0, 255, 0) # Green for Normal
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xmin, ymin, xmax, ymax = map(int, box.xyxy[0])
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# Draw the bounding box
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cv2.rectangle(image_with_boxes, (xmin, ymin), (xmax, ymax), color, 2)
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# Enlarge font scale and thickness
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font_scale = 1.0
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thickness = 2
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# Calculate label background size
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(text_width, text_height), baseline = cv2.getTextSize(f'{label} {confidence:.2f}', cv2.FONT_HERSHEY_SIMPLEX, font_scale, thickness)
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cv2.rectangle(image_with_boxes, (xmin, ymin - text_height - baseline), (xmin + text_width, ymin), (0, 0, 0), cv2.FILLED)
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# Put the label text with black background
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cv2.putText(image_with_boxes, f'{label} {confidence:.2f}', (xmin, ymin - 10), cv2.FONT_HERSHEY_SIMPLEX, font_scale, (255, 255, 255), thickness)
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raw_predictions.append(f"Label: {label}, Confidence: {confidence:.2f}, Box: [{xmin}, {ymin}, {xmax}, {ymax}]")
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raw_predictions_str = "\n".join(raw_predictions)
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# Convert to PIL image for further processing
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pil_image_with_boxes = Image.fromarray(image_with_boxes)
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# Add text and watermark
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pil_image_with_boxes = add_text_and_watermark(pil_image_with_boxes, name, patient_id, label)
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return pil_image_with_boxes, raw_predictions_str
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# Function to add watermark
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def add_watermark(image):
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try:
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logo = Image.open('image-logo.png').convert("RGBA")
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image = image.convert("RGBA")
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# Resize logo
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basewidth = 100
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wpercent = (basewidth / float(logo.size[0]))
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hsize = int((float(wpercent) * logo.size[1]))
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logo = logo.resize((basewidth, hsize), Image.LANCZOS)
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# Position logo
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position = (image.width - logo.width - 10, image.height - logo.height - 10)
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# Composite image
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transparent = Image.new('RGBA', (image.width, image.height), (0, 0, 0, 0))
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transparent.paste(image, (0, 0))
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transparent.paste(logo, position, mask=logo)
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return transparent.convert("RGB")
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except Exception as e:
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print(f"Error adding watermark: {e}")
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return image
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# Function to add text and watermark
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def add_text_and_watermark(image, name, patient_id, label):
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draw = ImageDraw.Draw(image)
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# Load a larger font (adjust the size as needed)
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font_size = 48 # Example font size
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try:
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font = ImageFont.truetype("font.ttf", size=font_size)
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except IOError:
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font = ImageFont.load_default()
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print("Error: cannot open resource, using default font.")
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text = f"Name: {name}, ID: {patient_id}, Result: {label}"
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# Calculate text bounding box
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text_bbox = draw.textbbox((0, 0), text, font=font)
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text_width, text_height = text_bbox[2] - text_bbox[0], text_bbox[3] - text_bbox[1]
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text_x = 20
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text_y = 40
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padding = 10
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# Draw a filled rectangle for the background
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draw.rectangle(
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[text_x - padding, text_y - padding, text_x + text_width + padding, text_y + text_height + padding],
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fill="black"
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)
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# Draw text on top of the rectangle
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draw.text((text_x, text_y), text, fill=(255, 255, 255, 255), font=font)
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# Add watermark to the image
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image_with_watermark = add_watermark(image)
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return image_with_watermark
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# Function to initialize the database
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def init_db():
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conn = sqlite3.connect('results.db')
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c = conn.cursor()
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c.execute('''CREATE TABLE IF NOT EXISTS results
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(id INTEGER PRIMARY KEY, name TEXT, patient_id TEXT, input_image BLOB, predicted_image BLOB, result TEXT)''')
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conn.commit()
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conn.close()
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# Function to submit result to the database
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def submit_result(name, patient_id, input_image, predicted_image, result):
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conn = sqlite3.connect('results.db')
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c = conn.cursor()
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input_image_np = np.array(input_image)
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_, input_buffer = cv2.imencode('.png', cv2.cvtColor(input_image_np, cv2.COLOR_RGB2BGR))
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input_image_bytes = input_buffer.tobytes()
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predicted_image_np = np.array(predicted_image)
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predicted_image_rgb = cv2.cvtColor(predicted_image_np, cv2.COLOR_RGB2BGR) # Ensure correct color conversion
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_, predicted_buffer = cv2.imencode('.png', predicted_image_rgb)
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predicted_image_bytes = predicted_buffer.tobytes()
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c.execute("INSERT INTO results (name, patient_id, input_image, predicted_image, result) VALUES (?, ?, ?, ?, ?)",
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(name, patient_id, input_image_bytes, predicted_image_bytes, result))
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conn.commit()
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conn.close()
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return "Result submitted to database."
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# Function to load and view database
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def view_database():
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conn = sqlite3.connect('results.db')
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c = conn.cursor()
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c.execute("SELECT * FROM results")
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rows = c.fetchall()
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conn.close()
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# Convert to pandas DataFrame
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df = pd.DataFrame(rows, columns=["ID", "Name", "Patient ID", "Input Image", "Predicted Image", "Result"])
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return df
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# Function to download database or image
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def download_file(choice):
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conn = sqlite3.connect('results.db')
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c = conn.cursor()
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if choice == "Database (.db)":
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conn.close()
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return 'results.db'
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else:
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c.execute("SELECT predicted_image FROM results ORDER BY id DESC LIMIT 1")
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row = c.fetchone()
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conn.close()
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if row:
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image_bytes = row[0]
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with tempfile.NamedTemporaryFile(delete=False, suffix='.png') as temp_file:
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temp_file.write(image_bytes)
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temp_file.flush() # Ensure all data is written before closing
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return temp_file.name
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else:
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conn.close()
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raise FileNotFoundError("No images found in the database.")
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# Initialize the database
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init_db()
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# Gradio Interface
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def interface(name, patient_id, input_image):
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if input_image is None:
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return "Please upload an image."
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output_image, raw_result = predict_image(input_image, name, patient_id)
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submit_status = submit_result(name, patient_id, input_image, output_image, raw_result)
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return output_image, raw_result, submit_status
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# View Database Function
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def view_db_interface():
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df = view_database()
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return df
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# Download Function
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def download_interface(choice):
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try:
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file_path = download_file(choice)
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with open(file_path, "rb") as file:
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return file.read(), f"{choice}"
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except Exception as e:
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return str(e)
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with gr.Blocks() as demo:
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with gr.Tabs():
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with gr.Tab("Image Analyzer and Screener"):
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gr.Markdown("## Cataract Detection System")
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with gr.Row():
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with gr.Column():
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input_image = gr.Image(label="Upload Image")
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name = gr.Textbox(label="Patient Name")
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patient_id = gr.Textbox(label="Patient ID")
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submit_btn = gr.Button("Submit")
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with gr.Column():
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output_image = gr.Image(label="Predicted Image")
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raw_result = gr.Textbox(label="Raw Result")
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submit_status = gr.Textbox(label="Submission Status")
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submit_btn.click(fn=interface, inputs=[name, patient_id, input_image], outputs=[output_image, raw_result, submit_status])
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with gr.Tab("Database Viewer"):
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view_db_btn = gr.Button("View Database")
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database_display = gr.Dataframe()
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view_db_btn.click(fn=view_db_interface, outputs=database_display)
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with gr.Tab("Download Results"):
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download_choice = gr.Radio(["Database (.db)", "Predicted Image (.png)"], label="Download Option")
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download_btn = gr.Button("Download")
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download_output = gr.File()
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download_btn.click(fn=download_interface, inputs=download_choice, outputs=download_output)
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demo.launch()
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