Spaces:
Running
on
Zero
Running
on
Zero
add demo video
Browse files
app.py
CHANGED
@@ -41,7 +41,8 @@ about = """ ## Background
|
|
41 |
1. **Adaptability Model**: Trained on Molecular Dynamics (MD) data, our model predicts flexibility at the atomic level.
|
42 |
2. **Correlation**: The adaptability predictions correlate well with the RMSD (Root Mean Square Deviation) from ESM3 sampling.
|
43 |
3. **Noise Application**: We apply noise to simulate protein flexibility, mimicking MD-like behavior.
|
44 |
-
|
|
|
45 |
## About
|
46 |
This demo uses the ESM3 model to predict protein structures from PDB files.
|
47 |
It runs multiple predictions with added noise and simulated MD frames, displaying the best result based on the lowest cRMSD.
|
@@ -354,6 +355,11 @@ def create_demo():
|
|
354 |
gr.Markdown(about)
|
355 |
with gr.Column():
|
356 |
gr.Markdown(howtouse)
|
|
|
|
|
|
|
|
|
|
|
357 |
with gr.Row():
|
358 |
with gr.Column(scale=1):
|
359 |
pdb_file = gr.File(label="Upload PDB file")
|
|
|
41 |
1. **Adaptability Model**: Trained on Molecular Dynamics (MD) data, our model predicts flexibility at the atomic level.
|
42 |
2. **Correlation**: The adaptability predictions correlate well with the RMSD (Root Mean Square Deviation) from ESM3 sampling.
|
43 |
3. **Noise Application**: We apply noise to simulate protein flexibility, mimicking MD-like behavior.
|
44 |
+
"""
|
45 |
+
about1 = """
|
46 |
## About
|
47 |
This demo uses the ESM3 model to predict protein structures from PDB files.
|
48 |
It runs multiple predictions with added noise and simulated MD frames, displaying the best result based on the lowest cRMSD.
|
|
|
355 |
gr.Markdown(about)
|
356 |
with gr.Column():
|
357 |
gr.Markdown(howtouse)
|
358 |
+
with gr.Row():
|
359 |
+
gr.Markdown(about1)
|
360 |
+
with gr.Accordion(label="watch presentation video", open=False):
|
361 |
+
with gr.Row():
|
362 |
+
gr.Video(value="demovideo/demo.mp4", label="MISATO Video Submission")
|
363 |
with gr.Row():
|
364 |
with gr.Column(scale=1):
|
365 |
pdb_file = gr.File(label="Upload PDB file")
|