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model_dir: "" |
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default_models: ['en_Radiology_ner_bc5cdr_md','en_ner_bc5cdr_md'] |
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examples: |
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radiology_eval_dataset: "eval_35.csv" |
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clinical note A: |
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"A 74 year old woman with history of hypertension and heart disease who had \ |
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been discharged 10 days before knee prosthetic surgery was admitted with 4 day \ |
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history of fever dry cough and dyspnoea. She had not left home since discharge \ |
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and no family member was affected. Analysis revealed lymphopenia elevation of C \ |
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reactive protein and a positive RT PCR. The patient was admitted to the intensive \ |
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care unit with a favourable course. Chest X ray on the second day showed diffuse \ |
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reticular pattern and increased density in both lungs" |
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Clinical note B: |
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"A 29 year old immunocompromised female patient with a 3 day history of cough and fever. \ |
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Past medical history includes severe ulcerative colitis treated with Tofacitinib \ |
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The patient was admitted to the hospital ward and discharged one week after admission \ |
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with complete recovery. Chest X ray shows increase of parenchymal opacity in right lower lobe" |
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negation: |
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"I am still have cough however there is absence of fever. i do not have any headache nor \ |
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stomachache but i do have SARS and COVID 19" |
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colors_palette: ["#99A3A4" ,"#bc4ed8","#FF5733","#54e96b","#2ce6f5","#f23fc4","#f3a53a",'#7FB3D5',"#EC7063","#F4D03F"] |
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