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| import logging | |
| import tarfile | |
| import fsspec | |
| from fsspec.archive import AbstractArchiveFileSystem | |
| from fsspec.compression import compr | |
| from fsspec.utils import infer_compression | |
| typemap = {b"0": "file", b"5": "directory"} | |
| logger = logging.getLogger("tar") | |
| class TarFileSystem(AbstractArchiveFileSystem): | |
| """Compressed Tar archives as a file-system (read-only) | |
| Supports the following formats: | |
| tar.gz, tar.bz2, tar.xz | |
| """ | |
| root_marker = "" | |
| protocol = "tar" | |
| cachable = False | |
| def __init__( | |
| self, | |
| fo="", | |
| index_store=None, | |
| target_options=None, | |
| target_protocol=None, | |
| compression=None, | |
| **kwargs, | |
| ): | |
| super().__init__(**kwargs) | |
| target_options = target_options or {} | |
| if isinstance(fo, str): | |
| self.of = fsspec.open(fo, protocol=target_protocol, **target_options) | |
| fo = self.of.open() # keep the reference | |
| # Try to infer compression. | |
| if compression is None: | |
| name = None | |
| # Try different ways to get hold of the filename. `fo` might either | |
| # be a `fsspec.LocalFileOpener`, an `io.BufferedReader` or an | |
| # `fsspec.AbstractFileSystem` instance. | |
| try: | |
| # Amended io.BufferedReader or similar. | |
| # This uses a "protocol extension" where original filenames are | |
| # propagated to archive-like filesystems in order to let them | |
| # infer the right compression appropriately. | |
| if hasattr(fo, "original"): | |
| name = fo.original | |
| # fsspec.LocalFileOpener | |
| elif hasattr(fo, "path"): | |
| name = fo.path | |
| # io.BufferedReader | |
| elif hasattr(fo, "name"): | |
| name = fo.name | |
| # fsspec.AbstractFileSystem | |
| elif hasattr(fo, "info"): | |
| name = fo.info()["name"] | |
| except Exception as ex: | |
| logger.warning( | |
| f"Unable to determine file name, not inferring compression: {ex}" | |
| ) | |
| if name is not None: | |
| compression = infer_compression(name) | |
| logger.info(f"Inferred compression {compression} from file name {name}") | |
| if compression is not None: | |
| # TODO: tarfile already implements compression with modes like "'r:gz'", | |
| # but then would seek to offset in the file work? | |
| fo = compr[compression](fo) | |
| self._fo_ref = fo | |
| self.fo = fo # the whole instance is a context | |
| self.tar = tarfile.TarFile(fileobj=self.fo) | |
| self.dir_cache = None | |
| self.index_store = index_store | |
| self.index = None | |
| self._index() | |
| def _index(self): | |
| # TODO: load and set saved index, if exists | |
| out = {} | |
| for ti in self.tar: | |
| info = ti.get_info() | |
| info["type"] = typemap.get(info["type"], "file") | |
| name = ti.get_info()["name"].rstrip("/") | |
| out[name] = (info, ti.offset_data) | |
| self.index = out | |
| # TODO: save index to self.index_store here, if set | |
| def _get_dirs(self): | |
| if self.dir_cache is not None: | |
| return | |
| # This enables ls to get directories as children as well as files | |
| self.dir_cache = { | |
| dirname: {"name": dirname, "size": 0, "type": "directory"} | |
| for dirname in self._all_dirnames(self.tar.getnames()) | |
| } | |
| for member in self.tar.getmembers(): | |
| info = member.get_info() | |
| info["name"] = info["name"].rstrip("/") | |
| info["type"] = typemap.get(info["type"], "file") | |
| self.dir_cache[info["name"]] = info | |
| def _open(self, path, mode="rb", **kwargs): | |
| if mode != "rb": | |
| raise ValueError("Read-only filesystem implementation") | |
| details, offset = self.index[path] | |
| if details["type"] != "file": | |
| raise ValueError("Can only handle regular files") | |
| return self.tar.extractfile(path) | |