Arts-of-coding commited on
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7213b53
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1 Parent(s): 2ede4ab

Update dash_plotly_QC_scRNA.py

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  1. dash_plotly_QC_scRNA.py +2 -0
dash_plotly_QC_scRNA.py CHANGED
@@ -422,6 +422,7 @@ def update_graph_and_pie_chart(batch_chosen, s_chosen, g2m_chosen, condition1_ch
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  # Final part to join the percentage expressed and mean expression levels
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  # TO DO
 
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  #expression_means = expression_means.select(["batch", "Gene", "Expression"] + condition3_chosen)
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@@ -474,6 +475,7 @@ def update_graph_and_pie_chart(batch_chosen, s_chosen, g2m_chosen, condition1_ch
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  hover_name='batch',template="seaborn")
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  fig_scatter_12 = px.scatter(data_frame=expression_means, x="Gene", y="batch", color="Mean expression",
 
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  #labels={'X_umap-0': 'umap1' , 'X_umap-1': 'umap2'},
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  hover_name='batch',template="seaborn")
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  # Final part to join the percentage expressed and mean expression levels
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  # TO DO
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+ expression_means = expression_means.join(dff_5, on=["batch","Gene"], how="inner")
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  #expression_means = expression_means.select(["batch", "Gene", "Expression"] + condition3_chosen)
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  hover_name='batch',template="seaborn")
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  fig_scatter_12 = px.scatter(data_frame=expression_means, x="Gene", y="batch", color="Mean expression",
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+ size="percentage",
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  #labels={'X_umap-0': 'umap1' , 'X_umap-1': 'umap2'},
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  hover_name='batch',template="seaborn")
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