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Update dash_plotly_QC_scRNA.py
Browse files- dash_plotly_QC_scRNA.py +2 -0
dash_plotly_QC_scRNA.py
CHANGED
@@ -422,6 +422,7 @@ def update_graph_and_pie_chart(batch_chosen, s_chosen, g2m_chosen, condition1_ch
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# Final part to join the percentage expressed and mean expression levels
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# TO DO
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#expression_means = expression_means.select(["batch", "Gene", "Expression"] + condition3_chosen)
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@@ -474,6 +475,7 @@ def update_graph_and_pie_chart(batch_chosen, s_chosen, g2m_chosen, condition1_ch
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hover_name='batch',template="seaborn")
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fig_scatter_12 = px.scatter(data_frame=expression_means, x="Gene", y="batch", color="Mean expression",
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#labels={'X_umap-0': 'umap1' , 'X_umap-1': 'umap2'},
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hover_name='batch',template="seaborn")
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# Final part to join the percentage expressed and mean expression levels
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# TO DO
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+
expression_means = expression_means.join(dff_5, on=["batch","Gene"], how="inner")
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#expression_means = expression_means.select(["batch", "Gene", "Expression"] + condition3_chosen)
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hover_name='batch',template="seaborn")
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fig_scatter_12 = px.scatter(data_frame=expression_means, x="Gene", y="batch", color="Mean expression",
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size="percentage",
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#labels={'X_umap-0': 'umap1' , 'X_umap-1': 'umap2'},
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hover_name='batch',template="seaborn")
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