File size: 6,588 Bytes
ce2d794 4a66f10 0c346f3 ce2d794 8927802 0c346f3 ce2d794 8927802 ce2d794 8927802 0c346f3 8927802 0c346f3 8927802 b56e939 8927802 b56e939 8927802 b56e939 8927802 ce2d794 8cebd63 8927802 8cebd63 8927802 0ac3298 8927802 0ac3298 ce2d794 8927802 b56e939 |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 |
import streamlit as st
import json
import pandas as pd
import streamlit.components.v1 as components
# Initialize session state for tracking the last clicked row
if 'last_clicked_row' not in st.session_state:
st.session_state['last_clicked_row'] = None
# Function to load JSONL file into a DataFrame
def load_jsonl(file_path):
data = []
with open(file_path, 'r') as f:
for line in f:
data.append(json.loads(line))
return pd.DataFrame(data)
# Function to filter DataFrame by keyword
def filter_by_keyword(df, keyword):
return df[df.apply(lambda row: row.astype(str).str.contains(keyword).any(), axis=1)]
# Function to generate HTML with textarea
def generate_html_with_textarea(text_to_speak):
return f'''
<!DOCTYPE html>
<html>
<head>
<title>Read It Aloud</title>
<script type="text/javascript">
function readAloud() {{
const text = document.getElementById("textArea").value;
const speech = new SpeechSynthesisUtterance(text);
window.speechSynthesis.speak(speech);
}}
</script>
</head>
<body>
<h1>๐ Read It Aloud</h1>
<textarea id="textArea" rows="10" cols="80">
{text_to_speak}
</textarea>
<br>
<button onclick="readAloud()">๐ Read Aloud</button>
</body>
</html>
'''
# Streamlit App ๐
st.title("AI Medical Explorer with Speech Synthesis ๐")
# Dropdown for file selection
file_option = st.selectbox("Select file:", ["usmle_16.2MB.jsonl", "usmle_2.08MB.jsonl"])
st.write(f"You selected: {file_option}")
# Load data
large_data = load_jsonl("usmle_16.2MB.jsonl")
small_data = load_jsonl("usmle_2.08MB.jsonl")
data = large_data if file_option == "usmle_16.2MB.jsonl" else small_data
# Top 20 healthcare terms for USMLE
top_20_terms = ['Heart', 'Lung', 'Pain', 'Memory', 'Kidney', 'Diabetes', 'Cancer', 'Infection', 'Virus', 'Bacteria', 'Gastrointestinal', 'Skin', 'Blood', 'Surgery']
# Create Expander and Columns UI for terms
with st.expander("Search by Common Terms ๐"):
cols = st.columns(4)
for term in top_20_terms:
with cols[top_20_terms.index(term) % 4]:
if st.button(f"{term}"):
filtered_data = filter_by_keyword(data, term)
st.write(f"Filter on '{term}' ๐")
with st.sidebar:
st.dataframe(filtered_data)
if not filtered_data.empty:
html_blocks = []
for idx, row in filtered_data.iterrows():
# Extracting fields from the row
question_number = idx + 1 # Assuming idx represents the question number
question = row.get("question", "No question field")
answer = row.get("answer", "No answer field")
options = row.get("options", {})
# Formatting options dictionary into a string
options_text = "<br>".join([f"{key}: {value}" for key, value in options.items()])
# Concatenating with labels
question_text = (f"QuestionNumber: {question_number}<br>"
f"Question: {question}<br>"
f"Options: {options_text}<br>"
f"Answer: {answer}")
# Generating HTML content
documentHTML5 = generate_html_with_textarea(question_text)
html_blocks.append(documentHTML5)
all_html = ''.join(html_blocks)
components.html(all_html, width=1280, height=1024)
# Text input for search keyword
search_keyword = st.text_input("Or, enter a keyword to filter data:")
if st.button("Search ๐ต๏ธโโ๏ธ"):
filtered_data = filter_by_keyword(data, search_keyword)
st.write(f"Filtered Dataset by '{search_keyword}' ๐")
st.dataframe(filtered_data)
if not filtered_data.empty:
html_blocks = []
for idx, row in filtered_data.iterrows():
question_text = row.get("question", "No question field")
documentHTML5 = generate_html_with_textarea(question_text)
html_blocks.append(documentHTML5)
all_html = ''.join(html_blocks)
components.html(all_html, width=1280, height=1024)
# Inject HTML5 and JavaScript for styling
st.markdown("""
<style>
.big-font {
font-size:24px !important;
}
</style>
""", unsafe_allow_html=True)
# Markdown and emojis for the case presentation
st.markdown("# ๐ฅ Case Study: 32-year-old Woman's Wellness Check")
st.markdown("## ๐ Patient Information")
st.markdown("""
- **Age**: 32
- **Gender**: Female
- **Past Medical History**: Asthma, Hypertension, Anxiety
- **Current Medications**: Albuterol, Fluticasone, Hydrochlorothiazide, Lisinopril, Fexofenadine
- **Vitals**
- **Temperature**: 99.5ยฐF (37.5ยฐC)
- **Blood Pressure**: 165/95 mmHg
- **Pulse**: 70/min
- **Respirations**: 15/min
- **Oxygen Saturation**: 98% on room air
""")
# Clinical Findings
st.markdown("## ๐ Clinical Findings")
st.markdown("""
- Cardiac exam reveals a S1 and S2 heart sound with a normal rate.
- Pulmonary exam is clear to auscultation bilaterally with good air movement.
- Abdominal exam reveals a bruit, normoactive bowel sounds, and an audible borborygmus.
- Neurological exam reveals cranial nerves II-XII as grossly intact with normal strength and reflexes in the upper and lower extremities.
""")
# Next Step Options
st.markdown("## ๐ค What is the best next step in management?")
# Multiple Choice
options = ["Blood Test", "MRI Scan", "Ultrasound with Doppler", "Immediate Surgery"]
choice = st.selectbox("", options)
# Explanation
if st.button("Submit"):
if choice == "Ultrasound with Doppler":
st.success("Correct! ๐")
st.markdown("""
### Explanation
The patient's high blood pressure coupled with an abdominal bruit suggests the possibility of renal artery stenosis.
An **Ultrasound with Doppler** is the best next step for assessing blood flow and evaluating for renal artery stenosis.
""")
else:
st.error("Incorrect. ๐")
st.markdown("""
The best next step is **Ultrasound with Doppler**.
""") |