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Browse files- adata.h5ad +2 -2
- lightning_logs/version_0/events.out.tfevents.1733432720.Yoseflab-R13B.329818.13 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733432962.Yoseflab-R13B.329818.17 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733433331.Yoseflab-R13B.329818.21 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733433912.Yoseflab-R13B.329818.25 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733434700.Yoseflab-R13B.337477.5 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733435405.Yoseflab-R13B.337477.9 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733435854.Yoseflab-R13B.337477.13 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733436752.Yoseflab-R13B.337477.17 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733437019.Yoseflab-R13B.337477.21 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733437295.Yoseflab-R13B.337477.25 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733437668.Yoseflab-R13B.337477.29 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733438245.Yoseflab-R13B.337477.33 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733438915.Yoseflab-R13B.337477.37 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733439378.Yoseflab-R13B.337477.41 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733439507.Yoseflab-R13B.337477.45 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733440288.Yoseflab-R13B.337477.53 +3 -0
- lightning_logs/version_0/hparams.yaml +1 -0
- lightning_logs/version_1/events.out.tfevents.1733434445.Yoseflab-R13B.337477.0 +3 -0
- lightning_logs/version_1/hparams.yaml +1 -0
- lightning_logs/version_2/events.out.tfevents.1733434470.Yoseflab-R13B.337477.1 +3 -0
- lightning_logs/version_2/hparams.yaml +1 -0
- metrics.json +5 -0
- model.pt +2 -2
adata.h5ad
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lightning_logs/version_1/events.out.tfevents.1733434445.Yoseflab-R13B.337477.0
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lightning_logs/version_1/hparams.yaml
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lightning_logs/version_2/events.out.tfevents.1733434470.Yoseflab-R13B.337477.1
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lightning_logs/version_2/hparams.yaml
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metrics.json
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{
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"cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.65 | 1.58 |\n| Pearson Correlation | 0.89 | 0.88 |\n| Spearman Correlation | 0.80 | 0.78 |\n| R\u00b2 (R-Squared) | 0.54 | 0.62 |",
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"gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 4.52 |\n| Pearson Correlation | 0.86 |\n| Spearman Correlation | 0.98 |\n| R\u00b2 (R-Squared) | 0.27 |",
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"diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| CD4-positive helper T cell | 0.95 | 3.13 | 0.71 | 0.83 | 0.16 | 0.88 | 3356.00 |\n| fibroblast | 0.94 | 1.23 | 0.81 | 0.96 | 0.45 | 0.92 | 3251.00 |\n| innate lymphoid cell | 0.91 | 2.19 | 0.66 | 0.82 | 0.20 | 0.82 | 2594.00 |\n| B cell | 0.93 | 2.71 | 0.63 | 0.75 | 0.20 | 0.84 | 1919.00 |\n| DN3 thymocyte | 0.91 | 3.33 | 0.67 | 0.79 | 0.19 | 0.83 | 1788.00 |\n| plasma cell | 0.88 | 1.73 | 0.74 | 0.89 | 0.26 | 0.94 | 1465.00 |\n| vein endothelial cell | 0.93 | 1.96 | 0.76 | 0.89 | 0.36 | 0.87 | 1442.00 |\n| vascular associated smooth muscle cell | 0.94 | 2.08 | 0.74 | 0.90 | 0.36 | 0.89 | 1439.00 |\n| DN1 thymic pro-T cell | 0.91 | 3.81 | 0.64 | 0.75 | 0.23 | 0.83 | 985.00 |\n| naive regulatory T cell | 0.88 | 3.85 | 0.70 | 0.78 | 0.20 | 0.84 | 761.00 |\n| CD8-positive, alpha-beta cytotoxic T cell | 0.90 | 3.82 | 0.71 | 0.76 | 0.20 | 0.84 | 501.00 |\n| T follicular helper cell | 0.83 | 3.98 | 0.69 | 0.73 | 0.20 | 0.81 | 398.00 |\n| capillary endothelial cell | 0.91 | 3.35 | 0.68 | 0.76 | 0.37 | 0.82 | 383.00 |\n| endothelial cell of artery | 0.90 | 3.07 | 0.72 | 0.80 | 0.37 | 0.83 | 355.00 |\n| macrophage | 0.89 | 2.92 | 0.71 | 0.81 | 0.36 | 0.84 | 303.00 |\n| endothelial cell of lymphatic vessel | 0.90 | 3.11 | 0.73 | 0.83 | 0.39 | 0.84 | 256.00 |\n| medullary thymic epithelial cell | 0.77 | 2.65 | 0.78 | 0.90 | 0.45 | 0.89 | 140.00 |\n| monocyte | 0.87 | 4.40 | 0.65 | 0.65 | 0.37 | 0.81 | 88.00 |\n| mature NK T cell | 0.80 | 5.00 | 0.59 | 0.56 | 0.32 | 0.68 | 80.00 |\n| erythrocyte | 0.80 | 4.55 | 0.56 | 0.51 | 0.32 | 0.88 | 39.00 |\n| DN4 thymocyte | 0.77 | 5.29 | 0.60 | 0.62 | 0.40 | 0.77 | 32.00 |"
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}
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model.pt
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