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Browse files- adata.h5ad +2 -2
- lightning_logs/version_0/events.out.tfevents.1733432962.Yoseflab-R13B.329818.17 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733433331.Yoseflab-R13B.329818.21 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733433912.Yoseflab-R13B.329818.25 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733434700.Yoseflab-R13B.337477.5 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733435405.Yoseflab-R13B.337477.9 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733435854.Yoseflab-R13B.337477.13 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733437019.Yoseflab-R13B.337477.21 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733437295.Yoseflab-R13B.337477.25 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733437668.Yoseflab-R13B.337477.29 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733438915.Yoseflab-R13B.337477.37 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733439378.Yoseflab-R13B.337477.41 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733439507.Yoseflab-R13B.337477.45 +3 -0
- lightning_logs/version_0/events.out.tfevents.1733440288.Yoseflab-R13B.337477.53 +3 -0
- lightning_logs/version_0/hparams.yaml +1 -0
- lightning_logs/version_1/events.out.tfevents.1733434445.Yoseflab-R13B.337477.0 +3 -0
- lightning_logs/version_1/hparams.yaml +1 -0
- lightning_logs/version_2/events.out.tfevents.1733434470.Yoseflab-R13B.337477.1 +3 -0
- lightning_logs/version_2/hparams.yaml +1 -0
- metrics.json +5 -0
- model.pt +2 -2
adata.h5ad
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lightning_logs/version_0/events.out.tfevents.1733439507.Yoseflab-R13B.337477.45
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lightning_logs/version_0/hparams.yaml
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lightning_logs/version_1/events.out.tfevents.1733434445.Yoseflab-R13B.337477.0
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lightning_logs/version_1/hparams.yaml
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lightning_logs/version_2/events.out.tfevents.1733434470.Yoseflab-R13B.337477.1
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lightning_logs/version_2/hparams.yaml
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metrics.json
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{
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"cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.26 | 1.35 |\n| Pearson Correlation | 0.95 | 0.93 |\n| Spearman Correlation | 0.93 | 0.92 |\n| R\u00b2 (R-Squared) | 0.89 | 0.86 |",
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"gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 19.36 |\n| Pearson Correlation | 0.70 |\n| Spearman Correlation | 0.77 |\n| R\u00b2 (R-Squared) | -1.07 |",
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"diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| acinar cell of salivary gland | 0.96 | 0.65 | 0.70 | 0.96 | 0.14 | 0.94 | 10147.00 |\n| memory B cell | 0.93 | 1.32 | 0.65 | 0.92 | 0.39 | 0.89 | 2879.00 |\n| fibroblast | 0.97 | 1.08 | 0.68 | 0.93 | 0.44 | 0.88 | 2169.00 |\n| CD8-positive, alpha-beta T cell | 0.96 | 2.28 | 0.64 | 0.87 | 0.21 | 0.77 | 1979.00 |\n| macrophage | 0.86 | 1.23 | 0.70 | 0.93 | 0.48 | 0.88 | 1761.00 |\n| duct epithelial cell | 0.91 | 1.25 | 0.66 | 0.89 | 0.39 | 0.83 | 1693.00 |\n| CD4-positive helper T cell | 0.97 | 2.10 | 0.63 | 0.87 | 0.32 | 0.83 | 1221.00 |\n| naive B cell | 0.92 | 2.46 | 0.64 | 0.83 | 0.34 | 0.84 | 1120.00 |\n| basal cell | 0.86 | 1.39 | 0.72 | 0.91 | 0.56 | 0.91 | 922.00 |\n| adventitial cell | 0.91 | 2.23 | 0.67 | 0.87 | 0.37 | 0.80 | 442.00 |\n| monocyte | 0.89 | 2.63 | 0.67 | 0.82 | 0.40 | 0.80 | 426.00 |\n| plasma cell | 0.86 | 2.35 | 0.67 | 0.79 | 0.22 | 0.85 | 345.00 |\n| endothelial cell | 0.83 | 2.37 | 0.69 | 0.82 | 0.48 | 0.83 | 323.00 |\n| endothelial cell of lymphatic vessel | 0.81 | 2.62 | 0.65 | 0.81 | 0.51 | 0.84 | 320.00 |\n| mature NK T cell | 0.82 | 3.15 | 0.65 | 0.78 | 0.39 | 0.80 | 317.00 |\n| T cell | 0.74 | 4.22 | 0.47 | 0.52 | 0.32 | 0.60 | 227.00 |\n| myoepithelial cell | 0.88 | 3.65 | 0.61 | 0.68 | 0.34 | 0.68 | 196.00 |\n| CD4-positive, alpha-beta T cell | 0.46 | 5.75 | 0.50 | 0.61 | 0.21 | 0.72 | 182.00 |\n| pericyte | 0.78 | 3.38 | 0.64 | 0.69 | 0.44 | 0.75 | 146.00 |\n| B cell | 0.35 | 2.65 | 0.60 | 0.77 | 0.43 | 0.75 | 137.00 |\n| neutrophil | 0.89 | 4.44 | 0.61 | 0.58 | 0.36 | 0.78 | 115.00 |\n| ionocyte | 0.82 | 4.39 | 0.63 | 0.64 | 0.39 | 0.72 | 87.00 |\n| salivary gland cell | 0.52 | 3.74 | 0.65 | 0.71 | 0.54 | 0.81 | 45.00 |"
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}
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model.pt
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