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adata.h5ad

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lightning_logs/version_0/events.out.tfevents.1733439018.Yoseflab-R13B.337477.38

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lightning_logs/version_0/events.out.tfevents.1733440432.Yoseflab-R13B.337477.54

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lightning_logs/version_0/hparams.yaml

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lightning_logs/version_1/events.out.tfevents.1733446062.Yoseflab-R13B.365372.39

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lightning_logs/version_1/events.out.tfevents.1733447267.Yoseflab-R13B.365372.51

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lightning_logs/version_1/hparams.yaml

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metrics.json

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 {
-    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.24  | 1.26           |\n| Pearson Correlation | 0.99  | 0.99  |\n| Spearman Correlation | 0.96 | 0.96  |\n| R\u00b2 (R-Squared) | 0.98  | 0.98      |",
-    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 23.59   |\n| Pearson Correlation | 0.72  |\n| Spearman Correlation | 0.77 |\n| R\u00b2 (R-Squared) | -0.67  |",
-    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| erythrocyte | 0.97 | 1.11 | 0.70 | 0.87 | 0.09 | 0.97 | 10061.00 |\n| neutrophil | 0.98 | 1.10 | 0.71 | 0.93 | 0.22 | 0.90 | 8432.00 |\n| classical monocyte | 0.94 | 0.53 | 0.76 | 0.97 | 0.62 | 0.95 | 7211.00 |\n| mature NK T cell | 0.95 | 1.39 | 0.62 | 0.92 | 0.63 | 0.93 | 2332.00 |\n| naive B cell | 0.97 | 1.83 | 0.60 | 0.86 | 0.48 | 0.88 | 1526.00 |\n| CD8-positive, alpha-beta cytokine secreting effector T cell | 0.93 | 1.45 | 0.67 | 0.89 | 0.64 | 0.93 | 1493.00 |\n| CD4-positive, alpha-beta memory T cell | 0.95 | 1.55 | 0.59 | 0.87 | 0.58 | 0.88 | 949.00 |\n| memory B cell | 0.98 | 1.87 | 0.67 | 0.86 | 0.54 | 0.88 | 597.00 |\n| type I NK T cell | 0.90 | 2.23 | 0.63 | 0.81 | 0.61 | 0.89 | 518.00 |\n| plasma cell | 0.74 | 1.29 | 0.76 | 0.95 | 0.61 | 0.94 | 487.00 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 0.93 | 2.64 | 0.61 | 0.80 | 0.46 | 0.82 | 412.00 |\n| CD8-positive, alpha-beta T cell | 0.96 | 2.15 | 0.65 | 0.82 | 0.58 | 0.88 | 376.00 |\n| platelet | 0.76 | 2.74 | 0.70 | 0.82 | 0.41 | 0.83 | 239.00 |\n| hematopoietic stem cell | 0.91 | 2.79 | 0.66 | 0.76 | 0.64 | 0.90 | 47.00 |\n| T cell | 0.94 | 3.88 | 0.61 | 0.51 | 0.54 | 0.77 | 31.00 |\n| basophil | 0.86 | 2.97 | 0.70 | 0.79 | 0.60 | 0.88 | 29.00 |\n| CD141-positive myeloid dendritic cell | 0.88 | 4.59 | 0.61 | 0.62 | 0.49 | 0.76 | 15.00 |\n| plasmacytoid dendritic cell | 0.84 | 5.23 | 0.55 | 0.49 | 0.47 | 0.72 | 11.00 |"
+    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.24  | 1.25           |\n| Pearson Correlation | 0.99  | 0.99  |\n| Spearman Correlation | 0.96 | 0.96  |\n| R\u00b2 (R-Squared) | 0.98  | 0.98      |",
+    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 23.70   |\n| Pearson Correlation | 0.72  |\n| Spearman Correlation | 0.78 |\n| R\u00b2 (R-Squared) | -0.70  |",
+    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| erythrocyte | 0.97 | 1.08 | 0.71 | 0.88 | 0.09 | 0.98 | 10061.00 |\n| neutrophil | 0.97 | 1.02 | 0.74 | 0.95 | 0.21 | 0.90 | 8432.00 |\n| classical monocyte | 0.94 | 0.56 | 0.73 | 0.97 | 0.62 | 0.95 | 7211.00 |\n| mature NK T cell | 0.95 | 1.34 | 0.65 | 0.92 | 0.62 | 0.93 | 2332.00 |\n| naive B cell | 0.97 | 1.70 | 0.63 | 0.87 | 0.47 | 0.87 | 1526.00 |\n| CD8-positive, alpha-beta cytokine secreting effector T cell | 0.94 | 1.60 | 0.62 | 0.87 | 0.64 | 0.93 | 1493.00 |\n| CD4-positive, alpha-beta memory T cell | 0.95 | 1.64 | 0.56 | 0.86 | 0.58 | 0.88 | 949.00 |\n| memory B cell | 0.98 | 2.07 | 0.62 | 0.86 | 0.54 | 0.88 | 597.00 |\n| type I NK T cell | 0.90 | 2.31 | 0.62 | 0.79 | 0.62 | 0.89 | 518.00 |\n| plasma cell | 0.76 | 1.25 | 0.77 | 0.95 | 0.61 | 0.94 | 487.00 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 0.95 | 2.45 | 0.64 | 0.80 | 0.46 | 0.82 | 412.00 |\n| CD8-positive, alpha-beta T cell | 0.94 | 2.07 | 0.66 | 0.82 | 0.57 | 0.87 | 376.00 |\n| platelet | 0.77 | 2.74 | 0.70 | 0.81 | 0.42 | 0.83 | 239.00 |\n| hematopoietic stem cell | 0.93 | 2.67 | 0.68 | 0.77 | 0.65 | 0.90 | 47.00 |\n| T cell | 0.93 | 3.83 | 0.62 | 0.51 | 0.55 | 0.77 | 31.00 |\n| basophil | 0.87 | 3.13 | 0.68 | 0.77 | 0.62 | 0.88 | 29.00 |\n| CD141-positive myeloid dendritic cell | 0.90 | 4.76 | 0.59 | 0.60 | 0.50 | 0.76 | 15.00 |\n| plasmacytoid dendritic cell | 0.85 | 5.24 | 0.55 | 0.49 | 0.46 | 0.72 | 11.00 |"
 }

model.pt

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