| { | |
| "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| macrophage | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| pulmonary alveolar type 2 cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| basal cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| non-classical monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| club cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| capillary endothelial cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| classical monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| basophil | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| CD4-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| respiratory goblet cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| vein endothelial cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| lung microvascular endothelial cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| lung ciliated cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| CD8-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| fibroblast | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| intermediate monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| adventitial cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| endothelial cell of artery | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| pulmonary alveolar type 1 cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| neutrophil | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| pericyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| effector CD8-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| effector CD4-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| plasma cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| bronchial smooth muscle cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| smooth muscle cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| endothelial cell of lymphatic vessel | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| mature NK T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| pulmonary ionocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| B cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |", | |
| "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| macrophage | 370 | 0.95 | 0.92 | 0.93 | 0.92 | 0.00 | 0.00 | 0.95 | 0.92 | 0.95 |\n| pulmonary alveolar type 2 cell | 243 | 0.98 | 0.89 | 0.93 | 0.97 | 0.00 | 0.80 | 0.99 | 0.95 | 0.98 |\n| basal cell | 59 | 0.69 | 0.21 | 0.82 | 0.78 | 0.00 | 0.00 | 0.93 | 0.91 | 0.94 |\n| non-classical monocyte | 34 | 0.46 | 0.00 | 0.26 | 0.55 | 0.00 | 0.00 | 0.67 | 0.56 | 0.63 |\n| club cell | 32 | 0.76 | 0.31 | 0.67 | 0.60 | 0.00 | 0.00 | 0.93 | 0.84 | 0.86 |\n| capillary endothelial cell | 31 | 0.76 | 0.80 | 0.93 | 0.69 | 0.00 | 0.00 | 0.98 | 0.94 | 0.95 |\n| classical monocyte | 26 | 0.69 | 0.49 | 0.74 | 0.51 | 0.00 | 0.00 | 0.98 | 0.92 | 0.92 |\n| basophil | 23 | 0.85 | 0.88 | 0.90 | 0.61 | 0.00 | 0.07 | 1.00 | 0.98 | 0.96 |\n| CD4-positive, alpha-beta T cell | 20 | 0.58 | 0.51 | 0.67 | 0.39 | 0.00 | 0.00 | 0.98 | 0.98 | 0.83 |\n| respiratory goblet cell | 18 | 0.60 | 0.45 | 0.80 | 0.67 | 0.00 | 0.00 | 0.97 | 0.88 | 0.95 |\n| vein endothelial cell | 14 | 0.44 | 0.52 | 0.72 | 0.33 | 0.00 | 0.00 | 0.90 | 0.97 | 0.88 |\n| lung microvascular endothelial cell | 14 | 0.85 | 0.61 | 0.87 | 0.69 | 0.00 | 0.00 | 1.00 | 1.00 | 0.90 |\n| lung ciliated cell | 14 | 0.85 | 0.92 | 0.88 | 0.57 | 0.00 | 0.00 | 1.00 | 0.97 | 1.00 |\n| CD8-positive, alpha-beta T cell | 12 | 0.00 | 0.00 | 0.53 | 0.59 | 0.00 | 0.00 | 0.96 | 1.00 | 0.91 |\n| fibroblast | 11 | 0.67 | 0.46 | 0.74 | 0.29 | 0.00 | 0.00 | 1.00 | 0.96 | 1.00 |\n| intermediate monocyte | 9 | 0.00 | 0.00 | 0.71 | 0.00 | 0.00 | 0.00 | 1.00 | 0.86 | 0.80 |\n| adventitial cell | 9 | 0.78 | 0.00 | 0.76 | 0.75 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 |\n| endothelial cell of artery | 8 | 0.00 | 0.25 | 0.80 | 0.47 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 |\n| pulmonary alveolar type 1 cell | 8 | 0.67 | 0.00 | 0.40 | 0.00 | 0.00 | 0.00 | 0.80 | 0.62 | 0.67 |\n| neutrophil | 7 | 0.93 | 0.25 | 0.83 | 0.92 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 |\n| dendritic cell | 6 | 0.50 | 0.29 | 0.25 | 0.40 | 0.00 | 0.00 | 1.00 | 0.86 | 0.80 |\n| pericyte | 6 | 0.80 | 0.00 | 0.75 | 0.67 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 |\n| effector CD8-positive, alpha-beta T cell | 3 | 0.00 | 0.00 | 0.33 | 0.86 | 0.00 | 0.00 | 1.00 | 1.00 | 0.50 |\n| effector CD4-positive, alpha-beta T cell | 3 | 0.00 | 0.00 | 0.00 | 0.57 | 0.00 | 0.00 | 1.00 | 1.00 | 0.80 |\n| plasma cell | 2 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 |\n| bronchial smooth muscle cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 |\n| smooth muscle cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 |\n| endothelial cell of lymphatic vessel | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 |\n| mature NK T cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 |\n| pulmonary ionocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.67 | 0.00 |\n| B cell | 1 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 |" | |
| } |