| { | |
| "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| fibroblast | 1262 | 0.98 | 0.97 | 0.98 | 0.97 | 0.00 | 0.96 | 0.98 | 0.97 | 0.98 |\n| smooth muscle cell | 855 | 0.92 | 0.92 | 0.95 | 0.91 | 0.00 | 0.92 | 0.92 | 0.93 | 0.93 |\n| macrophage | 753 | 0.98 | 0.98 | 0.98 | 0.99 | 0.00 | 0.95 | 0.97 | 0.98 | 0.98 |\n| endothelial cell | 276 | 0.80 | 0.65 | 0.77 | 0.59 | 0.00 | 0.70 | 0.86 | 0.87 | 0.88 |\n| capillary endothelial cell | 197 | 0.73 | 0.62 | 0.68 | 0.51 | 0.00 | 0.58 | 0.76 | 0.80 | 0.77 |\n| pericyte | 185 | 0.79 | 0.80 | 0.86 | 0.75 | 0.00 | 0.79 | 0.78 | 0.79 | 0.82 |\n| CD8-positive, alpha-beta T cell | 163 | 0.64 | 0.75 | 0.75 | 0.63 | 0.00 | 0.72 | 0.66 | 0.70 | 0.72 |\n| neutrophil | 131 | 1.00 | 1.00 | 0.99 | 1.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| vein endothelial cell | 78 | 0.65 | 0.40 | 0.54 | 0.28 | 0.00 | 0.56 | 0.68 | 0.72 | 0.75 |\n| CD4-positive, alpha-beta T cell | 87 | 0.73 | 0.80 | 0.79 | 0.63 | 0.00 | 0.82 | 0.77 | 0.78 | 0.80 |\n| endothelial cell of artery | 61 | 0.82 | 0.88 | 0.88 | 0.69 | 0.00 | 0.72 | 0.79 | 0.81 | 0.84 |\n| mature NK T cell | 50 | 0.64 | 0.70 | 0.61 | 0.39 | 0.00 | 0.62 | 0.61 | 0.67 | 0.66 |\n| monocyte | 46 | 0.90 | 0.89 | 0.90 | 0.86 | 0.00 | 0.70 | 0.81 | 0.82 | 0.87 |\n| basophil | 23 | 0.65 | 0.81 | 0.64 | 0.81 | 0.00 | 0.98 | 0.98 | 0.98 | 0.92 |\n| natural killer cell | 17 | 0.38 | 0.39 | 0.35 | 0.14 | 0.00 | 0.47 | 0.44 | 0.50 | 0.45 |\n| endothelial cell of lymphatic vessel | 23 | 0.98 | 0.98 | 1.00 | 0.96 | 0.00 | 0.87 | 0.96 | 0.96 | 0.98 |\n| mast cell | 20 | 0.00 | 0.74 | 0.47 | 0.78 | 0.00 | 0.93 | 0.95 | 0.92 | 0.92 |\n| B cell | 14 | 0.85 | 0.85 | 0.85 | 0.86 | 0.00 | 0.93 | 1.00 | 0.79 | 0.92 |\n| erythrocyte | 7 | 0.88 | 0.88 | 1.00 | 1.00 | 0.00 | 1.00 | 1.00 | 0.82 | 1.00 |\n| plasma cell | 9 | 0.88 | 0.80 | 0.94 | 0.88 | 0.00 | 0.84 | 1.00 | 0.88 | 1.00 |\n| T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| intermediate monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| classical monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| myeloid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| non-classical monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |", | |
| "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| fibroblast | 11433 | 0.97 | 0.95 | 0.99 | 0.99 | 0.00 | 0.97 | 0.97 | 0.97 | 0.98 |\n| smooth muscle cell | 7732 | 0.92 | 0.90 | 0.97 | 0.96 | 0.00 | 0.92 | 0.92 | 0.92 | 0.95 |\n| macrophage | 6764 | 0.98 | 0.98 | 0.98 | 0.98 | 0.00 | 0.95 | 0.98 | 0.97 | 0.98 |\n| endothelial cell | 2410 | 0.77 | 0.59 | 0.83 | 0.78 | 0.00 | 0.87 | 0.87 | 0.88 | 0.92 |\n| capillary endothelial cell | 1838 | 0.72 | 0.61 | 0.78 | 0.74 | 0.00 | 0.79 | 0.83 | 0.85 | 0.89 |\n| pericyte | 1586 | 0.79 | 0.81 | 0.92 | 0.88 | 0.00 | 0.82 | 0.81 | 0.81 | 0.88 |\n| CD8-positive, alpha-beta T cell | 1369 | 0.69 | 0.72 | 0.81 | 0.75 | 0.00 | 0.79 | 0.84 | 0.86 | 0.83 |\n| neutrophil | 1309 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 0.99 |\n| vein endothelial cell | 797 | 0.60 | 0.30 | 0.67 | 0.58 | 0.00 | 0.78 | 0.79 | 0.80 | 0.83 |\n| CD4-positive, alpha-beta T cell | 641 | 0.70 | 0.73 | 0.77 | 0.67 | 0.00 | 0.81 | 0.84 | 0.88 | 0.83 |\n| endothelial cell of artery | 584 | 0.77 | 0.78 | 0.88 | 0.78 | 0.00 | 0.78 | 0.83 | 0.85 | 0.87 |\n| mature NK T cell | 465 | 0.70 | 0.69 | 0.75 | 0.60 | 0.00 | 0.76 | 0.88 | 0.88 | 0.82 |\n| monocyte | 381 | 0.81 | 0.84 | 0.88 | 0.82 | 0.00 | 0.68 | 0.79 | 0.80 | 0.87 |\n| basophil | 221 | 0.72 | 0.72 | 0.79 | 0.92 | 0.00 | 0.96 | 0.99 | 0.99 | 0.97 |\n| natural killer cell | 225 | 0.52 | 0.52 | 0.61 | 0.44 | 0.00 | 0.78 | 0.89 | 0.91 | 0.87 |\n| endothelial cell of lymphatic vessel | 175 | 0.95 | 0.96 | 0.97 | 0.93 | 0.00 | 0.89 | 0.97 | 0.94 | 0.96 |\n| mast cell | 139 | 0.00 | 0.50 | 0.65 | 0.82 | 0.00 | 0.99 | 0.99 | 0.99 | 0.99 |\n| B cell | 134 | 0.97 | 0.97 | 0.97 | 0.91 | 0.00 | 0.96 | 0.99 | 0.98 | 0.99 |\n| erythrocyte | 76 | 0.92 | 0.91 | 0.97 | 0.97 | 0.00 | 0.91 | 0.98 | 0.93 | 0.96 |\n| plasma cell | 59 | 0.92 | 0.90 | 0.98 | 0.77 | 0.00 | 0.97 | 0.99 | 1.00 | 1.00 |\n| T cell | 16 | 0.00 | 0.00 | 0.54 | 0.62 | 0.00 | 0.41 | 0.97 | 0.97 | 0.88 |\n| intermediate monocyte | 13 | 0.00 | 0.00 | 0.12 | 0.27 | 0.00 | 0.18 | 1.00 | 1.00 | 0.82 |\n| classical monocyte | 12 | 0.00 | 0.00 | 0.60 | 0.67 | 0.00 | 0.60 | 1.00 | 1.00 | 0.91 |\n| myeloid dendritic cell | 5 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.09 | 1.00 | 0.62 | 0.00 |\n| non-classical monocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.50 | 1.00 | 1.00 | 1.00 |" | |
| } |