File size: 858 Bytes
90b0f4b 419a374 90b0f4b 42766a2 90b0f4b |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 |
{
"popv_version": "0.5.0",
"anndata_version": "0.11.3",
"setup_dict": {
"ref_labels_key": "popv_labels",
"ref_batch_key": "batch_key",
"unknown_celltype_label": "unassigned"
},
"prediction_keys": [
"popv_celltypist_prediction",
"popv_knn_bbknn_prediction",
"popv_knn_harmony_prediction",
"popv_knn_on_scvi_prediction",
"popv_onclass_prediction",
"popv_scanvi_prediction",
"popv_svm_prediction",
"popv_xgboost_prediction"
],
"method_kwargs": {},
"methods": [
"CELLTYPIST",
"KNN_BBKNN",
"KNN_HARMONY",
"KNN_SCVI",
"ONCLASS",
"SCANVI_POPV",
"Support_Vector",
"XGboost"
],
"cellxgene_url": "https://cellxgene.cziscience.com/e/a2d4d33e-4c62-4361-b80a-9be53d2e50e8.cxg/"
} |