Hugging Face's logo

popV
/
tabula_sapiens_Testis

Joblib
popV
biology
genomics
single-cell
anndata_version:0.11.3
python_version:3.11.11
tissue: Testis
Model card Files Community
canergen commited on
Commit
d9f19e3
·
verified ·
1 Parent(s): b4a3bbe

Upload folder using huggingface_hub

Browse files
Files changed (15) hide show
  1. OnClass.data-00000-of-00001 +1 -1
  2. OnClass.index +0 -0
  3. OnClass.meta +0 -0
  4. OnClass.npz +2 -2
  5. accuracies.json +2 -2
  6. celltypist.pkl +1 -1
  7. harmony_knn_classifier.joblib +2 -2
  8. popv_output/predictions.csv +0 -0
  9. preprocessing.json +22 -22
  10. pynndescent_index.joblib +2 -2
  11. scanvi/model.pt +2 -2
  12. scvi/model.pt +1 -1
  13. scvi_knn_classifier.joblib +2 -2
  14. svm_classifier_cuml.joblib +1 -1
  15. xgboost_classifier.model +2 -2
OnClass.data-00000-of-00001 CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:7c9a580d1486b856e90c201ace246ecea4880df9462ac058dbc8376df0180456
3
  size 27239224
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fe10192badfd5d31d8f02d779255c920b3970f2e2d4617c7aade816bde8511d2
3
  size 27239224
OnClass.index CHANGED
Binary files a/OnClass.index and b/OnClass.index differ
 
OnClass.meta CHANGED
Binary files a/OnClass.meta and b/OnClass.meta differ
 
OnClass.npz CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:83e894bea17c252255fd36e2739495065a01b352a30e446a9d31685af1789d2d
3
- size 144112416
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e4d6c30e474055cff6f0679777b91c93b48f8e741002cb1feb7a0fa40970c41b
3
+ size 144112396
accuracies.json CHANGED
@@ -1,4 +1,4 @@
1
  {
2
- "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 405 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.98 | 0.99 |\n| spermatocyte | 299 | 0.98 | 0.98 | 0.98 | 0.99 | 0.00 | 0.96 | 0.99 | 0.97 | 0.99 |\n| male germ cell | 12 | 1.00 | 1.00 | 1.00 | 0.96 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| peritubular myoid cell | 11 | 0.80 | 0.91 | 0.82 | 0.74 | 0.00 | 0.83 | 0.87 | 0.92 | 0.91 |\n| spermatogonium | 7 | 0.93 | 0.93 | 0.93 | 0.93 | 0.00 | 0.88 | 0.93 | 0.88 | 0.93 |\n| stromal cell | 6 | 0.86 | 0.60 | 0.80 | 0.67 | 0.00 | 0.86 | 0.77 | 0.92 | 0.86 |\n| tissue-resident macrophage | 4 | 1.00 | 1.00 | 1.00 | 1.00 | 0.00 | 0.86 | 1.00 | 1.00 | 1.00 |\n| endothelial cell | 7 | 0.83 | 0.92 | 0.92 | 0.92 | 0.00 | 0.92 | 0.92 | 0.92 | 0.92 |\n| Leydig cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| CD8-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| CD4-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| mast cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| macrophage | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| B cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
3
- "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 3604 | 0.98 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| spermatocyte | 2771 | 0.97 | 0.98 | 0.99 | 0.98 | 0.00 | 0.97 | 0.98 | 0.98 | 0.99 |\n| male germ cell | 104 | 0.97 | 0.99 | 0.99 | 0.97 | 0.00 | 0.98 | 1.00 | 1.00 | 1.00 |\n| peritubular myoid cell | 56 | 0.75 | 0.76 | 0.87 | 0.73 | 0.00 | 0.91 | 0.99 | 0.98 | 0.95 |\n| spermatogonium | 57 | 0.86 | 0.85 | 0.92 | 0.89 | 0.00 | 0.83 | 0.91 | 0.87 | 0.93 |\n| stromal cell | 55 | 0.81 | 0.65 | 0.87 | 0.80 | 0.00 | 0.96 | 0.99 | 1.00 | 0.93 |\n| tissue-resident macrophage | 50 | 0.91 | 0.93 | 0.97 | 0.96 | 0.00 | 0.99 | 1.00 | 1.00 | 0.99 |\n| endothelial cell | 46 | 1.00 | 1.00 | 1.00 | 0.95 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| Leydig cell | 9 | 0.00 | 0.11 | 0.33 | 0.38 | 0.00 | 0.94 | 1.00 | 1.00 | 0.71 |\n| CD8-positive, alpha-beta T cell | 3 | 0.00 | 0.00 | 0.50 | 0.00 | 0.00 | 0.67 | 1.00 | 1.00 | 1.00 |\n| CD4-positive, alpha-beta T cell | 2 | 0.00 | 0.50 | 0.57 | 0.40 | 0.00 | 0.67 | 1.00 | 1.00 | 1.00 |\n| mast cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| macrophage | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| B cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| monocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |"
4
  }
 
1
  {
2
+ "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 406 | 0.98 | 0.98 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.98 | 0.99 |\n| spermatocyte | 298 | 0.96 | 0.97 | 0.99 | 0.98 | 0.00 | 0.96 | 0.98 | 0.98 | 0.98 |\n| male germ cell | 11 | 1.00 | 1.00 | 1.00 | 1.00 | 0.00 | 0.88 | 1.00 | 1.00 | 1.00 |\n| peritubular myoid cell | 11 | 0.83 | 0.83 | 0.91 | 0.73 | 0.00 | 0.70 | 0.87 | 0.96 | 0.87 |\n| spermatogonium | 7 | 0.88 | 0.93 | 0.93 | 0.86 | 0.00 | 0.70 | 0.93 | 1.00 | 0.93 |\n| stromal cell | 6 | 0.86 | 0.60 | 0.86 | 0.71 | 0.00 | 0.67 | 0.77 | 0.92 | 0.86 |\n| tissue-resident macrophage | 5 | 1.00 | 1.00 | 1.00 | 0.89 | 0.00 | 1.00 | 1.00 | 0.89 | 1.00 |\n| endothelial cell | 7 | 0.83 | 0.92 | 0.92 | 0.77 | 0.00 | 0.92 | 0.92 | 0.92 | 0.92 |\n| Leydig cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| CD8-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| CD4-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| mast cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| macrophage | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| B cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
3
+ "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 3603 | 0.98 | 0.98 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| spermatocyte | 2772 | 0.97 | 0.98 | 0.99 | 0.98 | 0.00 | 0.97 | 0.98 | 0.98 | 0.99 |\n| male germ cell | 105 | 0.98 | 0.98 | 0.99 | 0.97 | 0.00 | 0.91 | 1.00 | 1.00 | 1.00 |\n| peritubular myoid cell | 56 | 0.76 | 0.83 | 0.88 | 0.77 | 0.00 | 0.96 | 0.99 | 1.00 | 0.95 |\n| spermatogonium | 57 | 0.85 | 0.86 | 0.92 | 0.85 | 0.00 | 0.71 | 0.93 | 0.88 | 0.94 |\n| stromal cell | 55 | 0.81 | 0.71 | 0.82 | 0.77 | 0.00 | 0.98 | 1.00 | 1.00 | 0.92 |\n| tissue-resident macrophage | 49 | 0.91 | 0.97 | 0.98 | 0.88 | 0.00 | 1.00 | 1.00 | 0.99 | 0.99 |\n| endothelial cell | 46 | 1.00 | 1.00 | 1.00 | 0.85 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| Leydig cell | 9 | 0.00 | 0.14 | 0.00 | 0.14 | 0.00 | 0.95 | 1.00 | 1.00 | 0.50 |\n| CD8-positive, alpha-beta T cell | 3 | 0.00 | 0.00 | 0.50 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| CD4-positive, alpha-beta T cell | 2 | 0.00 | 0.57 | 0.50 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| mast cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| macrophage | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| B cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| monocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |"
4
  }
celltypist.pkl CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:358790c30affbfd8c1ed5fedf25c4f2cd3492f78348a8e519a9df4fdca18a76f
3
  size 409529
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5de7f368d9879b5f2a23e18925d9387371517962953bdef7b027a2ab96a4711e
3
  size 409529
harmony_knn_classifier.joblib CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:4e900f98923ba658fd6660239d6e01c9b356260d92967dfc9151ed43e5a5c40c
3
- size 5140293
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:62b49a656af5f5c18b1692b9d095e368f1437948157c1422b13cc3e88f7f7344
3
+ size 5180450
popv_output/predictions.csv CHANGED
The diff for this file is too large to render. See raw diff
 
preprocessing.json CHANGED
@@ -107,7 +107,6 @@
107
  "ENSG00000033122",
108
  "ENSG00000033170",
109
  "ENSG00000033178",
110
- "ENSG00000033327",
111
  "ENSG00000033867",
112
  "ENSG00000034053",
113
  "ENSG00000034510",
@@ -166,7 +165,6 @@
166
  "ENSG00000054938",
167
  "ENSG00000054965",
168
  "ENSG00000055147",
169
- "ENSG00000055163",
170
  "ENSG00000055332",
171
  "ENSG00000055917",
172
  "ENSG00000055950",
@@ -184,7 +182,6 @@
184
  "ENSG00000058668",
185
  "ENSG00000058729",
186
  "ENSG00000058804",
187
- "ENSG00000059377",
188
  "ENSG00000059588",
189
  "ENSG00000060138",
190
  "ENSG00000060237",
@@ -265,6 +262,7 @@
265
  "ENSG00000071054",
266
  "ENSG00000071205",
267
  "ENSG00000071462",
 
268
  "ENSG00000071564",
269
  "ENSG00000071626",
270
  "ENSG00000071794",
@@ -283,6 +281,7 @@
283
  "ENSG00000072958",
284
  "ENSG00000073060",
285
  "ENSG00000073282",
 
286
  "ENSG00000073417",
287
  "ENSG00000073711",
288
  "ENSG00000073734",
@@ -351,6 +350,7 @@
351
  "ENSG00000079308",
352
  "ENSG00000079385",
353
  "ENSG00000079387",
 
354
  "ENSG00000079459",
355
  "ENSG00000079462",
356
  "ENSG00000079482",
@@ -437,6 +437,7 @@
437
  "ENSG00000088356",
438
  "ENSG00000088387",
439
  "ENSG00000088538",
 
440
  "ENSG00000088826",
441
  "ENSG00000089012",
442
  "ENSG00000089041",
@@ -458,6 +459,7 @@
458
  "ENSG00000090376",
459
  "ENSG00000090470",
460
  "ENSG00000090621",
 
461
  "ENSG00000090889",
462
  "ENSG00000090905",
463
  "ENSG00000090924",
@@ -469,7 +471,6 @@
469
  "ENSG00000091592",
470
  "ENSG00000091732",
471
  "ENSG00000091879",
472
- "ENSG00000092010",
473
  "ENSG00000092068",
474
  "ENSG00000092108",
475
  "ENSG00000092140",
@@ -664,6 +665,7 @@
664
  "ENSG00000105011",
665
  "ENSG00000105171",
666
  "ENSG00000105185",
 
667
  "ENSG00000105278",
668
  "ENSG00000105281",
669
  "ENSG00000105289",
@@ -672,6 +674,7 @@
672
  "ENSG00000105464",
673
  "ENSG00000105467",
674
  "ENSG00000105479",
 
675
  "ENSG00000105640",
676
  "ENSG00000105662",
677
  "ENSG00000105707",
@@ -939,6 +942,7 @@
939
  "ENSG00000115129",
940
  "ENSG00000115137",
941
  "ENSG00000115159",
 
942
  "ENSG00000115183",
943
  "ENSG00000115233",
944
  "ENSG00000115306",
@@ -993,6 +997,7 @@
993
  "ENSG00000116580",
994
  "ENSG00000116641",
995
  "ENSG00000116678",
 
996
  "ENSG00000116729",
997
  "ENSG00000116731",
998
  "ENSG00000116741",
@@ -1357,8 +1362,10 @@
1357
  "ENSG00000132300",
1358
  "ENSG00000132334",
1359
  "ENSG00000132341",
 
1360
  "ENSG00000132386",
1361
  "ENSG00000132424",
 
1362
  "ENSG00000132466",
1363
  "ENSG00000132475",
1364
  "ENSG00000132549",
@@ -1368,6 +1375,7 @@
1368
  "ENSG00000132681",
1369
  "ENSG00000132694",
1370
  "ENSG00000132749",
 
1371
  "ENSG00000132773",
1372
  "ENSG00000132780",
1373
  "ENSG00000132912",
@@ -1409,6 +1417,7 @@
1409
  "ENSG00000133943",
1410
  "ENSG00000133958",
1411
  "ENSG00000133962",
 
1412
  "ENSG00000134046",
1413
  "ENSG00000134057",
1414
  "ENSG00000134058",
@@ -1600,6 +1609,7 @@
1600
  "ENSG00000138640",
1601
  "ENSG00000138646",
1602
  "ENSG00000138650",
 
1603
  "ENSG00000138670",
1604
  "ENSG00000138696",
1605
  "ENSG00000138709",
@@ -1733,6 +1743,7 @@
1733
  "ENSG00000143398",
1734
  "ENSG00000143401",
1735
  "ENSG00000143437",
 
1736
  "ENSG00000143452",
1737
  "ENSG00000143469",
1738
  "ENSG00000143476",
@@ -1751,7 +1762,6 @@
1751
  "ENSG00000143799",
1752
  "ENSG00000143815",
1753
  "ENSG00000143878",
1754
- "ENSG00000143891",
1755
  "ENSG00000143919",
1756
  "ENSG00000143924",
1757
  "ENSG00000143933",
@@ -1836,7 +1846,6 @@
1836
  "ENSG00000145779",
1837
  "ENSG00000145781",
1838
  "ENSG00000145808",
1839
- "ENSG00000145817",
1840
  "ENSG00000145826",
1841
  "ENSG00000145832",
1842
  "ENSG00000145833",
@@ -2169,7 +2178,6 @@
2169
  "ENSG00000156970",
2170
  "ENSG00000156973",
2171
  "ENSG00000156976",
2172
- "ENSG00000156990",
2173
  "ENSG00000157036",
2174
  "ENSG00000157060",
2175
  "ENSG00000157106",
@@ -2186,6 +2194,7 @@
2186
  "ENSG00000157554",
2187
  "ENSG00000157557",
2188
  "ENSG00000157578",
 
2189
  "ENSG00000157680",
2190
  "ENSG00000157703",
2191
  "ENSG00000157764",
@@ -2233,7 +2242,6 @@
2233
  "ENSG00000159592",
2234
  "ENSG00000159593",
2235
  "ENSG00000159685",
2236
- "ENSG00000159733",
2237
  "ENSG00000159788",
2238
  "ENSG00000159885",
2239
  "ENSG00000159915",
@@ -2281,6 +2289,7 @@
2281
  "ENSG00000162520",
2282
  "ENSG00000162521",
2283
  "ENSG00000162592",
 
2284
  "ENSG00000162599",
2285
  "ENSG00000162604",
2286
  "ENSG00000162607",
@@ -2418,6 +2427,7 @@
2418
  "ENSG00000164329",
2419
  "ENSG00000164330",
2420
  "ENSG00000164331",
 
2421
  "ENSG00000164366",
2422
  "ENSG00000164398",
2423
  "ENSG00000164418",
@@ -2587,8 +2597,6 @@
2587
  "ENSG00000168070",
2588
  "ENSG00000168078",
2589
  "ENSG00000168079",
2590
- "ENSG00000168101",
2591
- "ENSG00000168137",
2592
  "ENSG00000168209",
2593
  "ENSG00000168214",
2594
  "ENSG00000168263",
@@ -2609,7 +2617,6 @@
2609
  "ENSG00000168779",
2610
  "ENSG00000168781",
2611
  "ENSG00000168785",
2612
- "ENSG00000168818",
2613
  "ENSG00000168843",
2614
  "ENSG00000168887",
2615
  "ENSG00000168916",
@@ -2767,7 +2774,6 @@
2767
  "ENSG00000172765",
2768
  "ENSG00000172818",
2769
  "ENSG00000172831",
2770
- "ENSG00000172845",
2771
  "ENSG00000172889",
2772
  "ENSG00000172915",
2773
  "ENSG00000172936",
@@ -2824,7 +2830,6 @@
2824
  "ENSG00000174628",
2825
  "ENSG00000174640",
2826
  "ENSG00000174652",
2827
- "ENSG00000174705",
2828
  "ENSG00000174718",
2829
  "ENSG00000174720",
2830
  "ENSG00000174744",
@@ -2854,7 +2859,6 @@
2854
  "ENSG00000175471",
2855
  "ENSG00000175497",
2856
  "ENSG00000175575",
2857
- "ENSG00000175582",
2858
  "ENSG00000175600",
2859
  "ENSG00000175606",
2860
  "ENSG00000175611",
@@ -2870,11 +2874,9 @@
2870
  "ENSG00000175928",
2871
  "ENSG00000175931",
2872
  "ENSG00000176029",
2873
- "ENSG00000176049",
2874
  "ENSG00000176101",
2875
  "ENSG00000176102",
2876
  "ENSG00000176105",
2877
- "ENSG00000176148",
2878
  "ENSG00000176160",
2879
  "ENSG00000176165",
2880
  "ENSG00000176177",
@@ -3028,7 +3030,6 @@
3028
  "ENSG00000182389",
3029
  "ENSG00000182463",
3030
  "ENSG00000182481",
3031
- "ENSG00000182533",
3032
  "ENSG00000182578",
3033
  "ENSG00000182580",
3034
  "ENSG00000182583",
@@ -3164,6 +3165,7 @@
3164
  "ENSG00000186088",
3165
  "ENSG00000186094",
3166
  "ENSG00000186111",
 
3167
  "ENSG00000186153",
3168
  "ENSG00000186185",
3169
  "ENSG00000186197",
@@ -3222,7 +3224,6 @@
3222
  "ENSG00000188033",
3223
  "ENSG00000188039",
3224
  "ENSG00000188042",
3225
- "ENSG00000188092",
3226
  "ENSG00000188107",
3227
  "ENSG00000188158",
3228
  "ENSG00000188177",
@@ -3571,6 +3572,7 @@
3571
  "ENSG00000224825",
3572
  "ENSG00000224897",
3573
  "ENSG00000224957",
 
3574
  "ENSG00000225434",
3575
  "ENSG00000225470",
3576
  "ENSG00000225484",
@@ -3651,7 +3653,6 @@
3651
  "ENSG00000231646",
3652
  "ENSG00000231672",
3653
  "ENSG00000231689",
3654
- "ENSG00000231758",
3655
  "ENSG00000231806",
3656
  "ENSG00000231889",
3657
  "ENSG00000232040",
@@ -3687,6 +3688,7 @@
3687
  "ENSG00000234665",
3688
  "ENSG00000234707",
3689
  "ENSG00000234715",
 
3690
  "ENSG00000234745",
3691
  "ENSG00000234776",
3692
  "ENSG00000234840",
@@ -3706,6 +3708,7 @@
3706
  "ENSG00000236107",
3707
  "ENSG00000236197",
3708
  "ENSG00000236202",
 
3709
  "ENSG00000236404",
3710
  "ENSG00000236532",
3711
  "ENSG00000236548",
@@ -3826,7 +3829,6 @@
3826
  "ENSG00000249797",
3827
  "ENSG00000249816",
3828
  "ENSG00000249835",
3829
- "ENSG00000249853",
3830
  "ENSG00000249917",
3831
  "ENSG00000249937",
3832
  "ENSG00000249961",
@@ -3839,7 +3841,6 @@
3839
  "ENSG00000250326",
3840
  "ENSG00000250328",
3841
  "ENSG00000250337",
3842
- "ENSG00000250423",
3843
  "ENSG00000250548",
3844
  "ENSG00000250582",
3845
  "ENSG00000250722",
@@ -3863,7 +3864,6 @@
3863
  "ENSG00000253276",
3864
  "ENSG00000253301",
3865
  "ENSG00000253438",
3866
- "ENSG00000253582",
3867
  "ENSG00000253626",
3868
  "ENSG00000253633",
3869
  "ENSG00000253729",
 
107
  "ENSG00000033122",
108
  "ENSG00000033170",
109
  "ENSG00000033178",
 
110
  "ENSG00000033867",
111
  "ENSG00000034053",
112
  "ENSG00000034510",
 
165
  "ENSG00000054938",
166
  "ENSG00000054965",
167
  "ENSG00000055147",
 
168
  "ENSG00000055332",
169
  "ENSG00000055917",
170
  "ENSG00000055950",
 
182
  "ENSG00000058668",
183
  "ENSG00000058729",
184
  "ENSG00000058804",
 
185
  "ENSG00000059588",
186
  "ENSG00000060138",
187
  "ENSG00000060237",
 
262
  "ENSG00000071054",
263
  "ENSG00000071205",
264
  "ENSG00000071462",
265
+ "ENSG00000071553",
266
  "ENSG00000071564",
267
  "ENSG00000071626",
268
  "ENSG00000071794",
 
281
  "ENSG00000072958",
282
  "ENSG00000073060",
283
  "ENSG00000073282",
284
+ "ENSG00000073331",
285
  "ENSG00000073417",
286
  "ENSG00000073711",
287
  "ENSG00000073734",
 
350
  "ENSG00000079308",
351
  "ENSG00000079385",
352
  "ENSG00000079387",
353
+ "ENSG00000079432",
354
  "ENSG00000079459",
355
  "ENSG00000079462",
356
  "ENSG00000079482",
 
437
  "ENSG00000088356",
438
  "ENSG00000088387",
439
  "ENSG00000088538",
440
+ "ENSG00000088727",
441
  "ENSG00000088826",
442
  "ENSG00000089012",
443
  "ENSG00000089041",
 
459
  "ENSG00000090376",
460
  "ENSG00000090470",
461
  "ENSG00000090621",
462
+ "ENSG00000090863",
463
  "ENSG00000090889",
464
  "ENSG00000090905",
465
  "ENSG00000090924",
 
471
  "ENSG00000091592",
472
  "ENSG00000091732",
473
  "ENSG00000091879",
 
474
  "ENSG00000092068",
475
  "ENSG00000092108",
476
  "ENSG00000092140",
 
665
  "ENSG00000105011",
666
  "ENSG00000105171",
667
  "ENSG00000105185",
668
+ "ENSG00000105227",
669
  "ENSG00000105278",
670
  "ENSG00000105281",
671
  "ENSG00000105289",
 
674
  "ENSG00000105464",
675
  "ENSG00000105467",
676
  "ENSG00000105479",
677
+ "ENSG00000105538",
678
  "ENSG00000105640",
679
  "ENSG00000105662",
680
  "ENSG00000105707",
 
942
  "ENSG00000115129",
943
  "ENSG00000115137",
944
  "ENSG00000115159",
945
+ "ENSG00000115170",
946
  "ENSG00000115183",
947
  "ENSG00000115233",
948
  "ENSG00000115306",
 
997
  "ENSG00000116580",
998
  "ENSG00000116641",
999
  "ENSG00000116678",
1000
+ "ENSG00000116703",
1001
  "ENSG00000116729",
1002
  "ENSG00000116731",
1003
  "ENSG00000116741",
 
1362
  "ENSG00000132300",
1363
  "ENSG00000132334",
1364
  "ENSG00000132341",
1365
+ "ENSG00000132383",
1366
  "ENSG00000132386",
1367
  "ENSG00000132424",
1368
+ "ENSG00000132432",
1369
  "ENSG00000132466",
1370
  "ENSG00000132475",
1371
  "ENSG00000132549",
 
1375
  "ENSG00000132681",
1376
  "ENSG00000132694",
1377
  "ENSG00000132749",
1378
+ "ENSG00000132763",
1379
  "ENSG00000132773",
1380
  "ENSG00000132780",
1381
  "ENSG00000132912",
 
1417
  "ENSG00000133943",
1418
  "ENSG00000133958",
1419
  "ENSG00000133962",
1420
+ "ENSG00000134013",
1421
  "ENSG00000134046",
1422
  "ENSG00000134057",
1423
  "ENSG00000134058",
 
1609
  "ENSG00000138640",
1610
  "ENSG00000138646",
1611
  "ENSG00000138650",
1612
+ "ENSG00000138668",
1613
  "ENSG00000138670",
1614
  "ENSG00000138696",
1615
  "ENSG00000138709",
 
1743
  "ENSG00000143398",
1744
  "ENSG00000143401",
1745
  "ENSG00000143437",
1746
+ "ENSG00000143443",
1747
  "ENSG00000143452",
1748
  "ENSG00000143469",
1749
  "ENSG00000143476",
 
1762
  "ENSG00000143799",
1763
  "ENSG00000143815",
1764
  "ENSG00000143878",
 
1765
  "ENSG00000143919",
1766
  "ENSG00000143924",
1767
  "ENSG00000143933",
 
1846
  "ENSG00000145779",
1847
  "ENSG00000145781",
1848
  "ENSG00000145808",
 
1849
  "ENSG00000145826",
1850
  "ENSG00000145832",
1851
  "ENSG00000145833",
 
2178
  "ENSG00000156970",
2179
  "ENSG00000156973",
2180
  "ENSG00000156976",
 
2181
  "ENSG00000157036",
2182
  "ENSG00000157060",
2183
  "ENSG00000157106",
 
2194
  "ENSG00000157554",
2195
  "ENSG00000157557",
2196
  "ENSG00000157578",
2197
+ "ENSG00000157625",
2198
  "ENSG00000157680",
2199
  "ENSG00000157703",
2200
  "ENSG00000157764",
 
2242
  "ENSG00000159592",
2243
  "ENSG00000159593",
2244
  "ENSG00000159685",
 
2245
  "ENSG00000159788",
2246
  "ENSG00000159885",
2247
  "ENSG00000159915",
 
2289
  "ENSG00000162520",
2290
  "ENSG00000162521",
2291
  "ENSG00000162592",
2292
+ "ENSG00000162594",
2293
  "ENSG00000162599",
2294
  "ENSG00000162604",
2295
  "ENSG00000162607",
 
2427
  "ENSG00000164329",
2428
  "ENSG00000164330",
2429
  "ENSG00000164331",
2430
+ "ENSG00000164342",
2431
  "ENSG00000164366",
2432
  "ENSG00000164398",
2433
  "ENSG00000164418",
 
2597
  "ENSG00000168070",
2598
  "ENSG00000168078",
2599
  "ENSG00000168079",
 
 
2600
  "ENSG00000168209",
2601
  "ENSG00000168214",
2602
  "ENSG00000168263",
 
2617
  "ENSG00000168779",
2618
  "ENSG00000168781",
2619
  "ENSG00000168785",
 
2620
  "ENSG00000168843",
2621
  "ENSG00000168887",
2622
  "ENSG00000168916",
 
2774
  "ENSG00000172765",
2775
  "ENSG00000172818",
2776
  "ENSG00000172831",
 
2777
  "ENSG00000172889",
2778
  "ENSG00000172915",
2779
  "ENSG00000172936",
 
2830
  "ENSG00000174628",
2831
  "ENSG00000174640",
2832
  "ENSG00000174652",
 
2833
  "ENSG00000174718",
2834
  "ENSG00000174720",
2835
  "ENSG00000174744",
 
2859
  "ENSG00000175471",
2860
  "ENSG00000175497",
2861
  "ENSG00000175575",
 
2862
  "ENSG00000175600",
2863
  "ENSG00000175606",
2864
  "ENSG00000175611",
 
2874
  "ENSG00000175928",
2875
  "ENSG00000175931",
2876
  "ENSG00000176029",
 
2877
  "ENSG00000176101",
2878
  "ENSG00000176102",
2879
  "ENSG00000176105",
 
2880
  "ENSG00000176160",
2881
  "ENSG00000176165",
2882
  "ENSG00000176177",
 
3030
  "ENSG00000182389",
3031
  "ENSG00000182463",
3032
  "ENSG00000182481",
 
3033
  "ENSG00000182578",
3034
  "ENSG00000182580",
3035
  "ENSG00000182583",
 
3165
  "ENSG00000186088",
3166
  "ENSG00000186094",
3167
  "ENSG00000186111",
3168
+ "ENSG00000186132",
3169
  "ENSG00000186153",
3170
  "ENSG00000186185",
3171
  "ENSG00000186197",
 
3224
  "ENSG00000188033",
3225
  "ENSG00000188039",
3226
  "ENSG00000188042",
 
3227
  "ENSG00000188107",
3228
  "ENSG00000188158",
3229
  "ENSG00000188177",
 
3572
  "ENSG00000224825",
3573
  "ENSG00000224897",
3574
  "ENSG00000224957",
3575
+ "ENSG00000225361",
3576
  "ENSG00000225434",
3577
  "ENSG00000225470",
3578
  "ENSG00000225484",
 
3653
  "ENSG00000231646",
3654
  "ENSG00000231672",
3655
  "ENSG00000231689",
 
3656
  "ENSG00000231806",
3657
  "ENSG00000231889",
3658
  "ENSG00000232040",
 
3688
  "ENSG00000234665",
3689
  "ENSG00000234707",
3690
  "ENSG00000234715",
3691
+ "ENSG00000234719",
3692
  "ENSG00000234745",
3693
  "ENSG00000234776",
3694
  "ENSG00000234840",
 
3708
  "ENSG00000236107",
3709
  "ENSG00000236197",
3710
  "ENSG00000236202",
3711
+ "ENSG00000236384",
3712
  "ENSG00000236404",
3713
  "ENSG00000236532",
3714
  "ENSG00000236548",
 
3829
  "ENSG00000249797",
3830
  "ENSG00000249816",
3831
  "ENSG00000249835",
 
3832
  "ENSG00000249917",
3833
  "ENSG00000249937",
3834
  "ENSG00000249961",
 
3841
  "ENSG00000250326",
3842
  "ENSG00000250328",
3843
  "ENSG00000250337",
 
3844
  "ENSG00000250548",
3845
  "ENSG00000250582",
3846
  "ENSG00000250722",
 
3864
  "ENSG00000253276",
3865
  "ENSG00000253301",
3866
  "ENSG00000253438",
 
3867
  "ENSG00000253626",
3868
  "ENSG00000253633",
3869
  "ENSG00000253729",
pynndescent_index.joblib CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:2ec4d945c3b34f88add0e3270ce884a16af2ad844162fc6fc3344cc8240f6849
3
- size 5508533
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cac5b98fd79da599855fc35c436b2fd251962c3c89d08838dca988d5de1fa03a
3
+ size 5493448
scanvi/model.pt CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:10aa20dbafa205bef274b14013bb01c2f4a1eb1eae42022fbaa1f47cd9228870
3
- size 11350316
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1eb6b16ec035272976d32c6f5bf18711cc2c2451467f34480f6359086a9306a7
3
+ size 11350380
scvi/model.pt CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:f3356589733dffa1cf8d4baffdf79d25ad5d702dc22ce17094194a4d98b6ac51
3
  size 10812669
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e8cf02a810e73a27c532c35e72856daa834e59006a755a2fcdd90acde3617809
3
  size 10812669
scvi_knn_classifier.joblib CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:9cf5937e6adc421147aa63b5212af1959683d83144044e12ca15d8007abc0e0c
3
- size 2844981
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e773689f066a46080b057a4055588c34b2612c905672ff320b1a42315c3e4448
3
+ size 2834850
svm_classifier_cuml.joblib CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:0f30790a38f821926fd9df642ce05a9a739eac726b578e01699624a648ac14b6
3
  size 257211
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3d6b34f69b40c4dd8d481a154cbab6ed9bc47cd5426e9d6a338a668b27d4b8a3
3
  size 257211
xgboost_classifier.model CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:bd06f9295003915e052c447b9047fd3def0f4d6f12857db0963e35c80392c924
3
- size 3422386
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e104b448bd15e761f3c9091aac62d4596631b22497fdee3a04abff3b87ead7a2
3
+ size 3428240