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@@ -33,3 +33,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
 *.zip filter=lfs diff=lfs merge=lfs -text
 *.zst filter=lfs diff=lfs merge=lfs -text
 *tfevents* filter=lfs diff=lfs merge=lfs -text
+OnClass.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text

OnClass.data-00000-of-00001

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OnClass.npz

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accuracies.json

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+{
+    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 405 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.98 | 0.99 |\n| spermatocyte | 299 | 0.98 | 0.98 | 0.98 | 0.99 | 0.00 | 0.96 | 0.99 | 0.97 | 0.99 |\n| male germ cell | 12 | 1.00 | 1.00 | 1.00 | 0.96 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| peritubular myoid cell | 11 | 0.80 | 0.91 | 0.82 | 0.74 | 0.00 | 0.83 | 0.87 | 0.92 | 0.91 |\n| spermatogonium | 7 | 0.93 | 0.93 | 0.93 | 0.93 | 0.00 | 0.88 | 0.93 | 0.88 | 0.93 |\n| stromal cell | 6 | 0.86 | 0.60 | 0.80 | 0.67 | 0.00 | 0.86 | 0.77 | 0.92 | 0.86 |\n| tissue-resident macrophage | 4 | 1.00 | 1.00 | 1.00 | 1.00 | 0.00 | 0.86 | 1.00 | 1.00 | 1.00 |\n| endothelial cell | 7 | 0.83 | 0.92 | 0.92 | 0.92 | 0.00 | 0.92 | 0.92 | 0.92 | 0.92 |\n| Leydig cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| CD8-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| CD4-positive, alpha-beta T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| mast cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| macrophage | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| B cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
+    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| spermatid | 3604 | 0.98 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| spermatocyte | 2771 | 0.97 | 0.98 | 0.99 | 0.98 | 0.00 | 0.97 | 0.98 | 0.98 | 0.99 |\n| male germ cell | 104 | 0.97 | 0.99 | 0.99 | 0.97 | 0.00 | 0.98 | 1.00 | 1.00 | 1.00 |\n| peritubular myoid cell | 56 | 0.75 | 0.76 | 0.87 | 0.73 | 0.00 | 0.91 | 0.99 | 0.98 | 0.95 |\n| spermatogonium | 57 | 0.86 | 0.85 | 0.92 | 0.89 | 0.00 | 0.83 | 0.91 | 0.87 | 0.93 |\n| stromal cell | 55 | 0.81 | 0.65 | 0.87 | 0.80 | 0.00 | 0.96 | 0.99 | 1.00 | 0.93 |\n| tissue-resident macrophage | 50 | 0.91 | 0.93 | 0.97 | 0.96 | 0.00 | 0.99 | 1.00 | 1.00 | 0.99 |\n| endothelial cell | 46 | 1.00 | 1.00 | 1.00 | 0.95 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| Leydig cell | 9 | 0.00 | 0.11 | 0.33 | 0.38 | 0.00 | 0.94 | 1.00 | 1.00 | 0.71 |\n| CD8-positive, alpha-beta T cell | 3 | 0.00 | 0.00 | 0.50 | 0.00 | 0.00 | 0.67 | 1.00 | 1.00 | 1.00 |\n| CD4-positive, alpha-beta T cell | 2 | 0.00 | 0.50 | 0.57 | 0.40 | 0.00 | 0.67 | 1.00 | 1.00 | 1.00 |\n| mast cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| macrophage | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| B cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| monocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |"
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celltypist.pkl

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checkpoint

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pynndescent_index.joblib

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scanvi/model.pt

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scvi/model.pt

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scvi_knn_classifier.joblib

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svm_classifier_cuml.joblib

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xgboost_classifier.model

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