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OnClass.data-00000-of-00001

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OnClass.npz

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accuracies.json

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 {
-    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn on bbknn |  knn on harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| eye photoreceptor cell | 164 | 1.00 | 1.00 | 0.93 | 1.00 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| enteroglial cell | 70 | 0.99 | 0.99 | 0.86 | 0.99 | 0.00 | 0.98 | 1.00 | 1.00 | 1.00 |\n| neuron | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| retinal bipolar neuron | 6 | 1.00 | 0.67 | 1.00 | 0.91 | 0.00 | 0.92 | 1.00 | 1.00 | 1.00 |\n| radial glial cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| retina horizontal cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
-    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn on bbknn |  knn on harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| eye photoreceptor cell | 1360 | 1.00 | 0.99 | 0.97 | 1.00 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| enteroglial cell | 880 | 0.99 | 0.94 | 0.95 | 0.99 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| neuron | 71 | 0.97 | 0.00 | 0.92 | 0.84 | 0.00 | 0.90 | 1.00 | 1.00 | 1.00 |\n| retinal bipolar neuron | 51 | 0.91 | 0.76 | 0.94 | 0.92 | 0.00 | 0.93 | 1.00 | 0.99 | 0.99 |\n| radial glial cell | 8 | 0.80 | 0.00 | 1.00 | 0.50 | 0.00 | 0.94 | 1.00 | 1.00 | 1.00 |\n| retina horizontal cell | 5 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.50 | 1.00 | 1.00 | 1.00 |"
+    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn on bbknn |  knn on harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| eye photoreceptor cell | 145 | 1.00 | 0.99 | 0.98 | 0.99 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| enteroglial cell | 90 | 1.00 | 0.97 | 0.98 | 0.98 | 0.00 | 0.98 | 1.00 | 0.99 | 0.99 |\n| neuron | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| retinal bipolar neuron | 10 | 1.00 | 0.33 | 0.75 | 0.82 | 0.00 | 0.78 | 1.00 | 0.82 | 0.82 |\n| retina horizontal cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
+    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn on bbknn |  knn on harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| eye photoreceptor cell | 1379 | 1.00 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| enteroglial cell | 868 | 0.99 | 0.94 | 0.96 | 0.99 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| neuron | 72 | 0.94 | 0.00 | 0.79 | 0.93 | 0.00 | 0.97 | 0.99 | 0.97 | 0.99 |\n| retinal bipolar neuron | 45 | 0.93 | 0.12 | 0.92 | 0.87 | 0.00 | 0.85 | 1.00 | 1.00 | 1.00 |\n| retina horizontal cell | 5 | 0.00 | 0.00 | 0.20 | 0.00 | 0.00 | 0.53 | 1.00 | 1.00 | 0.89 |"
 }

celltypist.pkl

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harmony_knn_classifier.joblib

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scanvi/model.pt

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scvi/model.pt

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svm_classifier.joblib

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svm_classifier_cuml.joblib

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xgboost_classifier.model

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