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README.md

@@ -5,7 +5,8 @@ tags:
 - biology
 - genomics
 - single-cell
-- anndata_version:0.11.1
+- anndata_version:0.11.3
+- python_version:3.11.11
 - popV
 - 'tissue: diverse'
 ---
@@ -31,21 +32,21 @@ computed on a 10% random subset of the data that was not used for training.
 
 | Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |
 | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
-| eye photoreceptor cell | 162 | 1.00 | 0.99 | 0.96 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |
-| enteroglial cell | 59 | 1.00 | 0.98 | 0.92 | 0.99 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |
+| eye photoreceptor cell | 157 | 1.00 | 1.00 | 0.96 | 0.99 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |
+| enteroglial cell | 67 | 1.00 | 0.99 | 0.93 | 1.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |
 | neuron | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
-| retinal bipolar neuron | 4 | 0.80 | 0.40 | 0.67 | 0.86 | 0.00 | 0.62 | 1.00 | 1.00 | 1.00 |
-| retina horizontal cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
+| retinal bipolar neuron | 6 | 0.92 | 0.80 | 0.80 | 0.83 | 0.00 | 0.92 | 1.00 | 1.00 | 1.00 |
+| retina horizontal cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
 
 The train accuracies are computed on the training data.
 
 | Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |
 | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
-| eye photoreceptor cell | 1363 | 1.00 | 1.00 | 0.98 | 1.00 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |
-| enteroglial cell | 877 | 1.00 | 0.94 | 0.97 | 0.99 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |
-| neuron | 73 | 0.99 | 0.00 | 0.92 | 0.93 | 0.00 | 0.98 | 0.99 | 0.99 | 1.00 |
-| retinal bipolar neuron | 53 | 0.92 | 0.61 | 0.94 | 0.89 | 0.00 | 0.82 | 1.00 | 1.00 | 0.99 |
-| retina horizontal cell | 3 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.29 | 1.00 | 1.00 | 1.00 |
+| eye photoreceptor cell | 1364 | 1.00 | 1.00 | 0.98 | 0.99 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |
+| enteroglial cell | 878 | 1.00 | 0.95 | 0.97 | 1.00 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |
+| neuron | 71 | 0.98 | 0.00 | 0.90 | 1.00 | 0.00 | 0.93 | 0.99 | 1.00 | 1.00 |
+| retinal bipolar neuron | 51 | 0.93 | 0.64 | 0.93 | 0.82 | 0.00 | 0.90 | 1.00 | 1.00 | 1.00 |
+| retina horizontal cell | 5 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.83 | 1.00 | 1.00 | 1.00 |
 
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