Upload folder using huggingface_hub
Browse files- .gitattributes +2 -0
- OnClass.data-00000-of-00001 +3 -0
- OnClass.index +0 -0
- OnClass.meta +0 -0
- OnClass.npz +3 -0
- accuracies.json +4 -0
- checkpoint +2 -0
- faiss_index.faiss +3 -0
- obo_dag.joblib +3 -0
- popv_output/predictions.csv +0 -0
- preprocessing.json +0 -0
.gitattributes
CHANGED
@@ -33,3 +33,5 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
|
|
33 |
*.zip filter=lfs diff=lfs merge=lfs -text
|
34 |
*.zst filter=lfs diff=lfs merge=lfs -text
|
35 |
*tfevents* filter=lfs diff=lfs merge=lfs -text
|
|
|
|
|
|
33 |
*.zip filter=lfs diff=lfs merge=lfs -text
|
34 |
*.zst filter=lfs diff=lfs merge=lfs -text
|
35 |
*tfevents* filter=lfs diff=lfs merge=lfs -text
|
36 |
+
OnClass.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
|
37 |
+
faiss_index.faiss filter=lfs diff=lfs merge=lfs -text
|
OnClass.data-00000-of-00001
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:d825c2249de1f4d6bdb7593e767d15c3c0cfc27c6c059e6a0be25088ccc5ce8b
|
3 |
+
size 27239224
|
OnClass.index
ADDED
Binary file (222 Bytes). View file
|
|
OnClass.meta
ADDED
Binary file (76.3 kB). View file
|
|
OnClass.npz
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:d5550ae2b4cde0c72b6e5f5a50ac62a2a82cc6868a4ed806c2b7852312a10a06
|
3 |
+
size 144112631
|
accuracies.json
ADDED
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"query_accuracy": "| Cell Type | N cells | onclass | Consensus Prediction |\n| --- | --- | --- | --- |\n| endothelial cell | 3130 | 0.00 | 0.00 |\n| capillary endothelial cell | 1568 | 0.00 | 0.00 |\n| cardiac endothelial cell | 1057 | 0.00 | 0.00 |\n| vein endothelial cell | 454 | 0.00 | 0.00 |\n| endothelial cell of artery | 340 | 0.00 | 0.00 |\n| endothelial cell of lymphatic vessel | 258 | 0.00 | 0.00 |\n| retinal blood vessel endothelial cell | 175 | 0.00 | 0.00 |\n| endothelial cell of vascular tree | 69 | 0.00 | 0.00 |\n| colon endothelial cell | 23 | 0.00 | 0.00 |\n| endothelial cell of arteriole | 9 | 0.00 | 0.00 |\n| endothelial cell of venule | 0 | 0.00 | 0.00 |",
|
3 |
+
"ref_accuracy": "| Cell Type | N cells | onclass | Consensus Prediction |\n| --- | --- | --- | --- |\n| endothelial cell | 30340 | 0.00 | 0.00 |\n| capillary endothelial cell | 13720 | 0.00 | 0.00 |\n| cardiac endothelial cell | 9023 | 0.00 | 0.00 |\n| vein endothelial cell | 4234 | 0.00 | 0.00 |\n| endothelial cell of artery | 3125 | 0.00 | 0.00 |\n| endothelial cell of lymphatic vessel | 2166 | 0.00 | 0.00 |\n| retinal blood vessel endothelial cell | 1881 | 0.00 | 0.00 |\n| endothelial cell of vascular tree | 800 | 0.00 | 0.00 |\n| colon endothelial cell | 297 | 0.00 | 0.00 |\n| endothelial cell of arteriole | 105 | 0.00 | 0.00 |\n| endothelial cell of venule | 44 | 0.00 | 0.00 |"
|
4 |
+
}
|
checkpoint
ADDED
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
1 |
+
model_checkpoint_path: "OnClass"
|
2 |
+
all_model_checkpoint_paths: "OnClass"
|
faiss_index.faiss
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:9b2ba8f6d6c44d802749a025c4fcf5cf8807f1b9af9ce82b52f4b5b9bcec90f9
|
3 |
+
size 13175045
|
obo_dag.joblib
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:88b6c19fc939f3c304978a10ef8b7cc6ba69d2d4a0a0613df8312b4ee3a26313
|
3 |
+
size 321386
|
popv_output/predictions.csv
ADDED
The diff for this file is too large to render.
See raw diff
|
|
preprocessing.json
ADDED
The diff for this file is too large to render.
See raw diff
|
|