mboggion commited on
Commit
a745af9
1 Parent(s): 8742ddb

Training in progress, epoch 1

Browse files
.gitignore ADDED
@@ -0,0 +1 @@
 
 
1
+ checkpoint-*/
config.json ADDED
@@ -0,0 +1,31 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "_name_or_path": "facebook/esm2_t12_35M_UR50D",
3
+ "architectures": [
4
+ "EsmForSequenceClassification"
5
+ ],
6
+ "attention_probs_dropout_prob": 0.0,
7
+ "classifier_dropout": null,
8
+ "emb_layer_norm_before": false,
9
+ "esmfold_config": null,
10
+ "hidden_act": "gelu",
11
+ "hidden_dropout_prob": 0.0,
12
+ "hidden_size": 480,
13
+ "initializer_range": 0.02,
14
+ "intermediate_size": 1920,
15
+ "is_folding_model": false,
16
+ "layer_norm_eps": 1e-05,
17
+ "mask_token_id": 32,
18
+ "max_position_embeddings": 1026,
19
+ "model_type": "esm",
20
+ "num_attention_heads": 20,
21
+ "num_hidden_layers": 12,
22
+ "pad_token_id": 1,
23
+ "position_embedding_type": "rotary",
24
+ "problem_type": "single_label_classification",
25
+ "token_dropout": true,
26
+ "torch_dtype": "float32",
27
+ "transformers_version": "4.26.1",
28
+ "use_cache": true,
29
+ "vocab_list": null,
30
+ "vocab_size": 33
31
+ }
pytorch_model.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3eae1f60792df4414620862985faaa507b34a8ee6ad71c0c9a7b9a39b8d23c11
3
+ size 136053289
runs/Mar13_09-28-45_e1691172065e/1678699732.8280308/events.out.tfevents.1678699732.e1691172065e.163.1 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:25f3f804a7e723df726f560cdbcbe79b2ce2e8c540426956af0c72fdc1573eb6
3
+ size 5743
runs/Mar13_09-28-45_e1691172065e/events.out.tfevents.1678699732.e1691172065e.163.0 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6f1ea250c030cf6ac556c1479396c613c9e5185be562fbfd45c543a539236643
3
+ size 4335
special_tokens_map.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "cls_token": "<cls>",
3
+ "eos_token": "<eos>",
4
+ "mask_token": "<mask>",
5
+ "pad_token": "<pad>",
6
+ "unk_token": "<unk>"
7
+ }
tokenizer_config.json ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ {
2
+ "model_max_length": 1024,
3
+ "name_or_path": "facebook/esm2_t12_35M_UR50D",
4
+ "special_tokens_map_file": "/root/.cache/huggingface/hub/models--facebook--esm2_t12_35M_UR50D/snapshots/7dd6b696c98c7054931280ec0e47504dc764d7ca/special_tokens_map.json",
5
+ "tokenizer_class": "EsmTokenizer"
6
+ }
training_args.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:652deb3d8c799eac636de8f2927098ca8cd7128188f1b0c2cfe18b36501511e2
3
+ size 3515
vocab.txt ADDED
@@ -0,0 +1,33 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ <cls>
2
+ <pad>
3
+ <eos>
4
+ <unk>
5
+ L
6
+ A
7
+ G
8
+ V
9
+ S
10
+ E
11
+ R
12
+ T
13
+ I
14
+ D
15
+ P
16
+ K
17
+ Q
18
+ N
19
+ F
20
+ Y
21
+ M
22
+ H
23
+ W
24
+ C
25
+ X
26
+ B
27
+ U
28
+ Z
29
+ O
30
+ .
31
+ -
32
+ <null_1>
33
+ <mask>