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README.md
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- split: test
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path: data/test-*
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---
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- split: test
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path: data/test-*
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---
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# Small Molecule Properties (SMP) dataset: QM9
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## Overview
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The QM9 dataset contains structures and energetic, electronic, and thermodynamic
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properties for 134k stable small organic molecules, obtained from quantum-chemical
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calculations (Ruddigkeit et al., 2004; Ramakrishnan et al., 2014).
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The task is to predict the molecular properties from the ground-state structure.
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We provide one random split in training, validation, and test set.
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Some molecules have been excluded because they failed consistency tests or were not
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properly processed.
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## Datasets
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- random: a random split (generated with atom3d, seed: 42)
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## Additional Information
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The field "labels" contains the following quantities (in this order) for each item:
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0 A GHz Rotational constant
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1 B GHz Rotational constant
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2 C GHz Rotational constant
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3 μ D Dipole moment
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4 α a0^3 Isotropic polarizability
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5 ϵHOMO Ha Energy of HOMO
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6 ϵLUMO Ha Energy of LUMO
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7 ϵgap Ha Gap (ϵLUMO−ϵHOMO)
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8 R^2 a0^2 Electronic spatial extent
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9 zpve Ha Zero point vibrational energy
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10 U0 Ha Internal energy at 0 K
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11 U Ha Internal energy at 298.15 K
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12 H Ha Enthalpy at 298.15 K
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13 G Ha Free energy at 298.15 K
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14 Cv calmolK Heat capacity at 298.15 K
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15 U0at Ha Internal energy at 0 K - thermochem. energy
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16 Uat Ha Internal energy at 298.15 K - thermochem. energy
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17 Hat Ha Enthalpy at 298.15 K - thermochem. energy
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18 Gat Ha Free energy at 298.15 K - thermochem. energy
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19 Cvat calmolK Heat capacity at 298.15 K - thermochem. energy
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## Citation Information
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@article{townshend2020atom3d,
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title={Atom3d: Tasks on molecules in three dimensions},
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author={Townshend, Raphael JL and V{\"o}gele, Martin and Suriana, Patricia and Derry, Alexander and Powers, Alexander and Laloudakis, Yianni and Balachandar, Sidhika and Jing, Bowen and Anderson, Brandon and Eismann, Stephan and others},
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journal={arXiv preprint arXiv:2012.04035},
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year={2020}
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}
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@article{nandi2023multixc,
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title={MultiXC-QM9: Large dataset of molecular and reaction energies from multi-level quantum chemical methods},
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author={Nandi, Surajit and Vegge, Tejs and Bhowmik, Arghya},
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journal={Scientific data},
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volume={10},
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number={1},
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pages={783},
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year={2023},
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publisher={Nature Publishing Group UK London}
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}
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@article{ruddigkeit2012enumeration,
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title={Enumeration of 166 billion organic small molecules in the chemical universe database GDB-17},
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author={Ruddigkeit, Lars and Van Deursen, Ruud and Blum, Lorenz C and Reymond, Jean-Louis},
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journal={Journal of chemical information and modeling},
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volume={52},
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number={11},
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pages={2864--2875},
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year={2012},
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publisher={ACS Publications}
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}
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