Update Mimic4Dataset.py

Mimic4Dataset.py

@@ -136,18 +136,23 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
         if self.config.name == 'Length of Stay' and self.config_path is None : self.config_path = _CONFIG_URLS['los'] 
         if self.config.name == 'Mortality' and self.config_path is None : self.config_path = _CONFIG_URLS['mortality']
 
-        #move to parent directory of mimic data
-        version = self.mimic_path.split('/')[-1]
-        m = self.mimic_path.split('/')[-2]
-        s='/'+m+'/'+version
-        dir = self.mimic_path.replace(s,'')
-        if dir[-1]!='/':
-            dir=dir+'/'
-        elif dir=='':
-            dir="./"
-        print(os.getcwd())
-        parent_dir = os.path.dirname(self.mimic_path)
-        os.chdir(parent_dir)
+        current_directory = os.getcwd()
+        if os.path.exists(os.path.dirname(current_directory)+'/MIMIC-IV-Data-Pipeline-main'):
+            dir =os.path.dirname(current_directory) 
+            os.chdir(dir)
+        else:
+            #move to parent directory of mimic data
+            version = self.mimic_path.split('/')[-1]
+            m = self.mimic_path.split('/')[-2]
+            s='/'+m+'/'+version
+            dir = self.mimic_path.replace(s,'')
+            if dir[-1]!='/':
+                dir=dir+'/'
+            elif dir=='':
+                dir="./"
+            print(os.getcwd())
+            parent_dir = os.path.dirname(self.mimic_path)
+            os.chdir(parent_dir)
 
         #clone git repo if doesnt exists
         repo_url='https://github.com/healthylaife/MIMIC-IV-Data-Pipeline'