Update Mimic4Dataset.py

Mimic4Dataset.py

@@ -6,6 +6,7 @@ import datasets
 import pickle
 from .cohort import task_cohort
 import subprocess
+from urllib.request import urlretrieve
 
 _DESCRIPTION = """\
 Dataset for mimic4 data, by default for the Mortality task.
@@ -17,7 +18,7 @@ mimic path should have this form : "absolute/path/to/mimic4data/mimiciv/2.2"
 _HOMEPAGE = "https://huggingface.co/datasets/thbndi/Mimic4Dataset"
 _CITATION = "https://proceedings.mlr.press/v193/gupta22a.html"
 _URL = "https://github.com/healthylaife/MIMIC-IV-Data-Pipeline"
-
+_DATA_GEN = 'https://huggingface.co/datasets/thbndi/Mimic4Dataset/blob/main/data_generation_icu_modify.py'
 class Mimic4DatasetConfig(datasets.BuilderConfig):
     """BuilderConfig for Mimic4Dataset."""
 
@@ -150,7 +151,11 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
             repodir = os.getcwd()
             path_bench = repodir+'/MIMIC-IV-Data-Pipeline-main'
             subprocess.run(["git", "clone", repo_url, path_bench])
-
+            
+        local_script_path = os.path.join(dl_manager.manual_dir, "data_generation_icu_modify.py")
+        urlretrieve(_DATA_GEN, local_script_path)
+        shutil.move(local_script_path, path_bench+'/model')
+        
         data_dir = path_bench + "/data/dataDic"
         print(data_dir)
         #task_cohort(self.name,self.mimic_path, path_bench, self.config_path)