musk / musk.py
mstz's picture
Upload musk.py
9e073e2
"""Musk: A Census Dataset"""
from typing import List
import datasets
import pandas
VERSION = datasets.Version("1.0.0")
_BASE_FEATURE_NAMES = [
"name",
"conformation_name",
"ray_0",
"ray_1",
"ray_2",
"ray_3",
"ray_4",
"ray_5",
"ray_6",
"ray_7",
"ray_8",
"ray_9",
"ray_10",
"ray_11",
"ray_12",
"ray_13",
"ray_14",
"ray_15",
"ray_16",
"ray_17",
"ray_18",
"ray_19",
"ray_20",
"ray_21",
"ray_22",
"ray_23",
"ray_24",
"ray_25",
"ray_26",
"ray_27",
"ray_28",
"ray_29",
"ray_30",
"ray_31",
"ray_32",
"ray_33",
"ray_34",
"ray_35",
"ray_36",
"ray_37",
"ray_38",
"ray_39",
"ray_40",
"ray_41",
"ray_42",
"ray_43",
"ray_44",
"ray_45",
"ray_46",
"ray_47",
"ray_48",
"ray_49",
"ray_50",
"ray_51",
"ray_52",
"ray_53",
"ray_54",
"ray_55",
"ray_56",
"ray_57",
"ray_58",
"ray_59",
"ray_60",
"ray_61",
"ray_62",
"ray_63",
"ray_64",
"ray_65",
"ray_66",
"ray_67",
"ray_68",
"ray_69",
"ray_70",
"ray_71",
"ray_72",
"ray_73",
"ray_74",
"ray_75",
"ray_76",
"ray_77",
"ray_78",
"ray_79",
"ray_80",
"ray_81",
"ray_82",
"ray_83",
"ray_84",
"ray_85",
"ray_86",
"ray_87",
"ray_88",
"ray_89",
"ray_90",
"ray_91",
"ray_92",
"ray_93",
"ray_94",
"ray_95",
"ray_96",
"ray_97",
"ray_98",
"ray_99",
"ray_100",
"ray_101",
"ray_102",
"ray_103",
"ray_104",
"ray_105",
"ray_106",
"ray_107",
"ray_108",
"ray_109",
"ray_110",
"ray_111",
"ray_112",
"ray_113",
"ray_114",
"ray_115",
"ray_116",
"ray_117",
"ray_118",
"ray_119",
"ray_120",
"ray_121",
"ray_122",
"ray_123",
"ray_124",
"ray_125",
"ray_126",
"ray_127",
"ray_128",
"ray_129",
"ray_130",
"ray_131",
"ray_132",
"ray_133",
"ray_134",
"ray_135",
"ray_136",
"ray_137",
"ray_138",
"ray_139",
"ray_140",
"ray_141",
"ray_142",
"ray_143",
"ray_144",
"ray_145",
"ray_146",
"ray_147",
"ray_148",
"ray_149",
"ray_150",
"ray_151",
"ray_152",
"ray_153",
"ray_154",
"ray_155",
"ray_156",
"ray_157",
"ray_158",
"ray_159",
"ray_160",
"ray_161",
"oxy_distance",
"displacement_1",
"displacement_2",
"displacement_3",
"is_musk"
]
DESCRIPTION = "Musk dataset from the UCI ML repository."
_HOMEPAGE = "https://archive.ics.uci.edu/ml/datasets/Musk"
_URLS = ("https://huggingface.co/datasets/mstz/musk/raw/musk.csv")
_CITATION = """
@misc{misc_musk_(version_1)_74,
author = {Chapman,David & Jain,Ajay},
title = {{Musk (Version 1)}},
year = {1994},
howpublished = {UCI Machine Learning Repository},
note = {{DOI}: \\url{10.24432/C5ZK5B}}
}"""
# Dataset info
urls_per_split = {
"train": "https://huggingface.co/datasets/mstz/musk/raw/main/clean1.data"
}
features_types_per_config = {
"musk": {
"ray_0": datasets.Value("float64"),
"ray_1": datasets.Value("float64"),
"ray_2": datasets.Value("float64"),
"ray_3": datasets.Value("float64"),
"ray_4": datasets.Value("float64"),
"ray_5": datasets.Value("float64"),
"ray_6": datasets.Value("float64"),
"ray_7": datasets.Value("float64"),
"ray_8": datasets.Value("float64"),
"ray_9": datasets.Value("float64"),
"ray_10": datasets.Value("float64"),
"ray_11": datasets.Value("float64"),
"ray_12": datasets.Value("float64"),
"ray_13": datasets.Value("float64"),
"ray_14": datasets.Value("float64"),
"ray_15": datasets.Value("float64"),
"ray_16": datasets.Value("float64"),
"ray_17": datasets.Value("float64"),
"ray_18": datasets.Value("float64"),
"ray_19": datasets.Value("float64"),
"ray_20": datasets.Value("float64"),
"ray_21": datasets.Value("float64"),
"ray_22": datasets.Value("float64"),
"ray_23": datasets.Value("float64"),
"ray_24": datasets.Value("float64"),
"ray_25": datasets.Value("float64"),
"ray_26": datasets.Value("float64"),
"ray_27": datasets.Value("float64"),
"ray_28": datasets.Value("float64"),
"ray_29": datasets.Value("float64"),
"ray_30": datasets.Value("float64"),
"ray_31": datasets.Value("float64"),
"ray_32": datasets.Value("float64"),
"ray_33": datasets.Value("float64"),
"ray_34": datasets.Value("float64"),
"ray_35": datasets.Value("float64"),
"ray_36": datasets.Value("float64"),
"ray_37": datasets.Value("float64"),
"ray_38": datasets.Value("float64"),
"ray_39": datasets.Value("float64"),
"ray_40": datasets.Value("float64"),
"ray_41": datasets.Value("float64"),
"ray_42": datasets.Value("float64"),
"ray_43": datasets.Value("float64"),
"ray_44": datasets.Value("float64"),
"ray_45": datasets.Value("float64"),
"ray_46": datasets.Value("float64"),
"ray_47": datasets.Value("float64"),
"ray_48": datasets.Value("float64"),
"ray_49": datasets.Value("float64"),
"ray_50": datasets.Value("float64"),
"ray_51": datasets.Value("float64"),
"ray_52": datasets.Value("float64"),
"ray_53": datasets.Value("float64"),
"ray_54": datasets.Value("float64"),
"ray_55": datasets.Value("float64"),
"ray_56": datasets.Value("float64"),
"ray_57": datasets.Value("float64"),
"ray_58": datasets.Value("float64"),
"ray_59": datasets.Value("float64"),
"ray_60": datasets.Value("float64"),
"ray_61": datasets.Value("float64"),
"ray_62": datasets.Value("float64"),
"ray_63": datasets.Value("float64"),
"ray_64": datasets.Value("float64"),
"ray_65": datasets.Value("float64"),
"ray_66": datasets.Value("float64"),
"ray_67": datasets.Value("float64"),
"ray_68": datasets.Value("float64"),
"ray_69": datasets.Value("float64"),
"ray_70": datasets.Value("float64"),
"ray_71": datasets.Value("float64"),
"ray_72": datasets.Value("float64"),
"ray_73": datasets.Value("float64"),
"ray_74": datasets.Value("float64"),
"ray_75": datasets.Value("float64"),
"ray_76": datasets.Value("float64"),
"ray_77": datasets.Value("float64"),
"ray_78": datasets.Value("float64"),
"ray_79": datasets.Value("float64"),
"ray_80": datasets.Value("float64"),
"ray_81": datasets.Value("float64"),
"ray_82": datasets.Value("float64"),
"ray_83": datasets.Value("float64"),
"ray_84": datasets.Value("float64"),
"ray_85": datasets.Value("float64"),
"ray_86": datasets.Value("float64"),
"ray_87": datasets.Value("float64"),
"ray_88": datasets.Value("float64"),
"ray_89": datasets.Value("float64"),
"ray_90": datasets.Value("float64"),
"ray_91": datasets.Value("float64"),
"ray_92": datasets.Value("float64"),
"ray_93": datasets.Value("float64"),
"ray_94": datasets.Value("float64"),
"ray_95": datasets.Value("float64"),
"ray_96": datasets.Value("float64"),
"ray_97": datasets.Value("float64"),
"ray_98": datasets.Value("float64"),
"ray_99": datasets.Value("float64"),
"ray_100": datasets.Value("float64"),
"ray_101": datasets.Value("float64"),
"ray_102": datasets.Value("float64"),
"ray_103": datasets.Value("float64"),
"ray_104": datasets.Value("float64"),
"ray_105": datasets.Value("float64"),
"ray_106": datasets.Value("float64"),
"ray_107": datasets.Value("float64"),
"ray_108": datasets.Value("float64"),
"ray_109": datasets.Value("float64"),
"ray_110": datasets.Value("float64"),
"ray_111": datasets.Value("float64"),
"ray_112": datasets.Value("float64"),
"ray_113": datasets.Value("float64"),
"ray_114": datasets.Value("float64"),
"ray_115": datasets.Value("float64"),
"ray_116": datasets.Value("float64"),
"ray_117": datasets.Value("float64"),
"ray_118": datasets.Value("float64"),
"ray_119": datasets.Value("float64"),
"ray_120": datasets.Value("float64"),
"ray_121": datasets.Value("float64"),
"ray_122": datasets.Value("float64"),
"ray_123": datasets.Value("float64"),
"ray_124": datasets.Value("float64"),
"ray_125": datasets.Value("float64"),
"ray_126": datasets.Value("float64"),
"ray_127": datasets.Value("float64"),
"ray_128": datasets.Value("float64"),
"ray_129": datasets.Value("float64"),
"ray_130": datasets.Value("float64"),
"ray_131": datasets.Value("float64"),
"ray_132": datasets.Value("float64"),
"ray_133": datasets.Value("float64"),
"ray_134": datasets.Value("float64"),
"ray_135": datasets.Value("float64"),
"ray_136": datasets.Value("float64"),
"ray_137": datasets.Value("float64"),
"ray_138": datasets.Value("float64"),
"ray_139": datasets.Value("float64"),
"ray_140": datasets.Value("float64"),
"ray_141": datasets.Value("float64"),
"ray_142": datasets.Value("float64"),
"ray_143": datasets.Value("float64"),
"ray_144": datasets.Value("float64"),
"ray_145": datasets.Value("float64"),
"ray_146": datasets.Value("float64"),
"ray_147": datasets.Value("float64"),
"ray_148": datasets.Value("float64"),
"ray_149": datasets.Value("float64"),
"ray_150": datasets.Value("float64"),
"ray_151": datasets.Value("float64"),
"ray_152": datasets.Value("float64"),
"ray_153": datasets.Value("float64"),
"ray_154": datasets.Value("float64"),
"ray_155": datasets.Value("float64"),
"ray_156": datasets.Value("float64"),
"ray_157": datasets.Value("float64"),
"ray_158": datasets.Value("float64"),
"ray_159": datasets.Value("float64"),
"ray_160": datasets.Value("float64"),
"ray_161": datasets.Value("float64"),
"oxy_distance": datasets.Value("float64"),
"displacement_1": datasets.Value("float64"),
"displacement_2": datasets.Value("float64"),
"displacement_3": datasets.Value("float64"),
"is_musk": datasets.ClassLabel(num_classes=2, names=("no", "yes"))
}
}
features_per_config = {k: datasets.Features(features_types_per_config[k]) for k in features_types_per_config}
class MuskConfig(datasets.BuilderConfig):
def __init__(self, **kwargs):
super(MuskConfig, self).__init__(version=VERSION, **kwargs)
self.features = features_per_config[kwargs["name"]]
class Musk(datasets.GeneratorBasedBuilder):
# dataset versions
DEFAULT_CONFIG = "musk"
BUILDER_CONFIGS = [
MuskConfig(name="musk",
description="Musk for binary classification.")
]
def _info(self):
info = datasets.DatasetInfo(description=DESCRIPTION, citation=_CITATION, homepage=_HOMEPAGE,
features=features_per_config[self.config.name])
return info
def _split_generators(self, dl_manager: datasets.DownloadManager) -> List[datasets.SplitGenerator]:
downloads = dl_manager.download_and_extract(urls_per_split)
return [
datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": downloads["train"]})
]
def _generate_examples(self, filepath: str):
data = pandas.read_csv(filepath, header=None)
data.columns = _BASE_FEATURE_NAMES
data.drop("name", axis="columns", inplace=True)
data.drop("conformation_name", axis="columns", inplace=True)
for row_id, row in data.iterrows():
data_row = dict(row)
yield row_id, data_row