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The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError
Exception: DatasetGenerationCastError
Message: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 5 new columns ({'participant_id', 'birth_age', 'singleton', 'gender', 'birth_weight'}) and 2 missing columns ({'index', 'name'}).
This happened while the csv dataset builder was generating data using
hf://datasets/RichardErkhov/dhcp_anat_pipeline/participants.tsv (at revision ddcf8568107d0ca11750fa6c103b801814e9e9dd)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1870, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 622, in write_table
pa_table = table_cast(pa_table, self._schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2292, in table_cast
return cast_table_to_schema(table, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2240, in cast_table_to_schema
raise CastError(
datasets.table.CastError: Couldn't cast
participant_id: string
gender: string
birth_age: double
birth_weight: double
singleton: string
-- schema metadata --
pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 863
to
{'index': Value(dtype='int64', id=None), 'name': Value(dtype='string', id=None)}
because column names don't match
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1412, in compute_config_parquet_and_info_response
parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 988, in stream_convert_to_parquet
builder._prepare_split(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1741, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1872, in _prepare_split_single
raise DatasetGenerationCastError.from_cast_error(
datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 5 new columns ({'participant_id', 'birth_age', 'singleton', 'gender', 'birth_weight'}) and 2 missing columns ({'index', 'name'}).
This happened while the csv dataset builder was generating data using
hf://datasets/RichardErkhov/dhcp_anat_pipeline/participants.tsv (at revision ddcf8568107d0ca11750fa6c103b801814e9e9dd)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
index
int64 | name
string |
|---|---|
1
|
L_Hippocampus
|
2
|
R_Hippocampus
|
3
|
L_Amygdala
|
4
|
R_Amygdala
|
5
|
L_Anterior_temporal_lobe_medial
|
6
|
R_Anterior_temporal_lobe_medial
|
7
|
L_Anterior_temporal_lobe_lateral
|
8
|
R_Anterior_temporal_lobe_lateral
|
9
|
L_Gyri_parahippocampalis_et_ambiens_anterior
|
10
|
R_Gyri_parahippocampalis_et_ambiens_anterior
|
11
|
L_Superior_temporal_gyrus_middle
|
12
|
R_Superior_temporal_gyrus_middle
|
13
|
L_Medial_and_inferior_temporal_gyri_anterior
|
14
|
R_Medial_and_inferior_temporal_gyri_anterior
|
15
|
L_Lateral_occipitotemporal_gyrus_gyrus_fusiformis_anterior
|
16
|
R_Lateral_occipitotemporal_gyrus_gyrus_fusiformis_anterior
|
17
|
L_Cerebellum
|
18
|
R_Cerebellum
|
19
|
Brainstem_spans_the_midline
|
20
|
R_Insula
|
21
|
L_Insula
|
22
|
R_Occipital_lobe
|
23
|
L_Occipital_lobe
|
24
|
R_Gyri_parahippocampalis_et_ambiens_posterior
|
25
|
L_Gyri_parahippocampalis_et_ambiens_posterior
|
26
|
R_Lateral_occipitotemporal_gyrus_gyrus_fusiformis_posterior
|
27
|
L_Lateral_occipitotemporal_gyrus_gyrus_fusiformis_posterior
|
28
|
R_Medial_and_inferior_temporal_gyri_posterior
|
29
|
L_Medial_and_inferior_temporal_gyri_posterior
|
30
|
R_Superior_temporal_gyrus_posterior
|
31
|
L_Superior_temporal_gyrus_posterior
|
32
|
R_Cingulate_gyrus_anterior
|
33
|
L_Cingulate_gyrus_anterior
|
34
|
R_Cingulate_gyrus_posterior
|
35
|
L_Cingulate_gyrus_posterior
|
36
|
R_Frontal_lobe
|
37
|
L_Frontal_lobe
|
38
|
R_Parietal_lobe
|
39
|
L_Parietal_lobe
|
40
|
R_Caudate_nucleus
|
41
|
L_Caudate_nucleus
|
42
|
R_Thalamus
|
43
|
L_Thalamus
|
44
|
R_Subthalamic_nucleus
|
45
|
L_Subthalamic_nucleus
|
46
|
R_Lentiform_Nucleus
|
47
|
L_Lentiform_Nucleus
|
48
|
Corpus_Callosum
|
49
|
L_Lateral_Ventricle
|
50
|
R_Lateral_Ventricle
|
1
|
Cerebrospinal Fluid
|
2
|
Cortical Grey Matter
|
3
|
White Matter
|
4
|
Background
|
5
|
Ventricle
|
6
|
Cerebellum
|
7
|
Deep Grey Matter
|
8
|
Brainstem
|
9
|
Hippocampus
|
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
null | null |
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