mwirth7 commited on
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d73e8c5
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1 Parent(s): 629b54c

taxonomy update

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Files changed (1) hide show
  1. BirdSet.py +100 -6
BirdSet.py CHANGED
@@ -22,6 +22,8 @@ from .classes import BIRD_NAMES_NIPS4BPLUS, BIRD_NAMES_AMAZON_BASIN, BIRD_NAMES_
22
  BIRD_NAMES_HIGH_SIERRAS, BIRD_NAMES_SIERRA_NEVADA, BIRD_NAMES_POWDERMILL_NATURE, BIRD_NAMES_SAPSUCKER, \
23
  BIRD_NAMES_COLUMBIA_COSTA_RICA, BIRD_NAMES_XENOCANTO, BIRD_NAMES_XENOCANTO_M
24
 
 
 
25
  from .descriptions import _BIRD_DB_CITATION, _NIPS4BPLUS_CITATION, _NIPS4BPLUS_DESCRIPTION, \
26
  _HIGH_SIERRAS_DESCRIPTION, _HIGH_SIERRAS_CITATION, _SIERRA_NEVADA_DESCRIPTION, _SIERRA_NEVADA_CITATION, \
27
  _POWDERMILL_NATURE_DESCRIPTION, _POWDERMILL_NATURE_CITATION, _AMAZON_BASIN_DESCRIPTION, _AMAZON_BASIN_CITATION, \
@@ -30,9 +32,9 @@ from .descriptions import _BIRD_DB_CITATION, _NIPS4BPLUS_CITATION, _NIPS4BPLUS_D
30
 
31
  #############################################
32
  _BIRDSET_CITATION = """\
33
- @article{rauch2024,
34
  title = {BirdSet: A Multi-Task Benchmark For Avian Diversity Monitoring},
35
- author={Rauch, Lukas and Schwinger, Raphael and Wirth, Moritz and Lange, Jonas and Heinrich, René},
36
  year={2024}
37
  }
38
  """
@@ -44,8 +46,8 @@ _BIRDSET_DESCRIPTION = """\
44
  contained dataset.
45
  """
46
 
47
- base_url = "https://huggingface.co/datasets/DBD-research-group/gadme/resolve/data"
48
-
49
 
50
  class BirdSetConfig(datasets.BuilderConfig):
51
  def __init__(
@@ -53,6 +55,9 @@ class BirdSetConfig(datasets.BuilderConfig):
53
  name,
54
  citation,
55
  class_list,
 
 
 
56
  **kwargs):
57
  super().__init__(version=datasets.Version("0.0.2"), name=name, **kwargs)
58
 
@@ -80,6 +85,12 @@ class BirdSetConfig(datasets.BuilderConfig):
80
  "peaks": datasets.Sequence(datasets.Value("float64")),
81
  "quality": datasets.Value("string"),
82
  "recordist": datasets.Value("string"),
 
 
 
 
 
 
83
  })
84
 
85
  self.features = features
@@ -98,6 +109,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
98
  citation=_SAPSUCKER_WOODS_CITATION,
99
  data_dir=f"{base_url}/SSW",
100
  class_list=BIRD_NAMES_SAPSUCKER,
 
 
 
101
  ),
102
  BirdSetConfig(
103
  name="SSW_xc",
@@ -105,6 +119,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
105
  citation=_SAPSUCKER_WOODS_CITATION,
106
  data_dir=f"{base_url}/SSW",
107
  class_list=BIRD_NAMES_SAPSUCKER,
 
 
 
108
  ),
109
  BirdSetConfig(
110
  name="SSW_scape",
@@ -112,6 +129,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
112
  citation=_SAPSUCKER_WOODS_CITATION,
113
  data_dir=f"{base_url}/SSW",
114
  class_list=BIRD_NAMES_SAPSUCKER,
 
 
 
115
  ),
116
  BirdSetConfig(
117
  name="PER",
@@ -119,6 +139,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
119
  citation=_AMAZON_BASIN_CITATION,
120
  data_dir=f"{base_url}/PER",
121
  class_list=BIRD_NAMES_AMAZON_BASIN,
 
 
 
122
  ),
123
  BirdSetConfig(
124
  name="PER_xc",
@@ -126,6 +149,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
126
  citation=_AMAZON_BASIN_CITATION,
127
  data_dir=f"{base_url}/PER",
128
  class_list=BIRD_NAMES_AMAZON_BASIN,
 
 
 
129
  ),
130
  BirdSetConfig(
131
  name="PER_scape",
@@ -133,6 +159,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
133
  citation=_AMAZON_BASIN_CITATION,
134
  data_dir=f"{base_url}/PER",
135
  class_list=BIRD_NAMES_AMAZON_BASIN,
 
 
 
136
  ),
137
  BirdSetConfig(
138
  name="UHH",
@@ -140,6 +169,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
140
  citation=_HAWAIIAN_ISLANDS_CITATION,
141
  data_dir=f"{base_url}/UHH",
142
  class_list=BIRD_NAMES_HAWAII,
 
 
 
143
  ),
144
  BirdSetConfig(
145
  name="UHH_xc",
@@ -147,6 +179,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
147
  citation=_HAWAIIAN_ISLANDS_CITATION,
148
  data_dir=f"{base_url}/UHH",
149
  class_list=BIRD_NAMES_HAWAII,
 
 
 
150
  ),
151
  BirdSetConfig(
152
  name="UHH_scape",
@@ -154,6 +189,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
154
  citation=_HAWAIIAN_ISLANDS_CITATION,
155
  data_dir=f"{base_url}/UHH",
156
  class_list=BIRD_NAMES_HAWAII,
 
 
 
157
  ),
158
  BirdSetConfig(
159
  name="SNE",
@@ -161,6 +199,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
161
  citation=_SIERRA_NEVADA_CITATION,
162
  data_dir=f"{base_url}/SNE",
163
  class_list=BIRD_NAMES_SIERRA_NEVADA,
 
 
 
164
  ),
165
  BirdSetConfig(
166
  name="SNE_xc",
@@ -168,6 +209,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
168
  citation=_SIERRA_NEVADA_CITATION,
169
  data_dir=f"{base_url}/SNE",
170
  class_list=BIRD_NAMES_SIERRA_NEVADA,
 
 
 
171
  ),
172
  BirdSetConfig(
173
  name="SNE_scape",
@@ -175,6 +219,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
175
  citation=_SIERRA_NEVADA_CITATION,
176
  data_dir=f"{base_url}/SNE",
177
  class_list=BIRD_NAMES_SIERRA_NEVADA,
 
 
 
178
  ),
179
  BirdSetConfig(
180
  name="POW",
@@ -182,6 +229,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
182
  citation=_POWDERMILL_NATURE_CITATION,
183
  data_dir=f"{base_url}/POW",
184
  class_list=BIRD_NAMES_POWDERMILL_NATURE,
 
 
 
185
  ),
186
  BirdSetConfig(
187
  name="POW_xc",
@@ -189,6 +239,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
189
  citation=_POWDERMILL_NATURE_CITATION,
190
  data_dir=f"{base_url}/POW",
191
  class_list=BIRD_NAMES_POWDERMILL_NATURE,
 
 
 
192
  ),
193
  BirdSetConfig(
194
  name="POW_scape",
@@ -196,6 +249,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
196
  citation=_POWDERMILL_NATURE_CITATION,
197
  data_dir=f"{base_url}/POW",
198
  class_list=BIRD_NAMES_POWDERMILL_NATURE,
 
 
 
199
  ),
200
  BirdSetConfig(
201
  name="HSN",
@@ -203,6 +259,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
203
  citation=_HIGH_SIERRAS_CITATION,
204
  data_dir=f"{base_url}/HSN",
205
  class_list=BIRD_NAMES_HIGH_SIERRAS,
 
 
 
206
  ),
207
  BirdSetConfig(
208
  name="HSN_xc",
@@ -210,6 +269,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
210
  citation=_HIGH_SIERRAS_CITATION,
211
  data_dir=f"{base_url}/HSN",
212
  class_list=BIRD_NAMES_HIGH_SIERRAS,
 
 
 
213
  ),
214
  BirdSetConfig(
215
  name="HSN_scape",
@@ -217,6 +279,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
217
  citation=_HIGH_SIERRAS_CITATION,
218
  data_dir=f"{base_url}/HSN",
219
  class_list=BIRD_NAMES_HIGH_SIERRAS,
 
 
 
220
  ),
221
  BirdSetConfig(
222
  name="NES",
@@ -224,6 +289,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
224
  citation=_COLUMBIA_COSTA_RICA_CITATION,
225
  data_dir=f"{base_url}/NES",
226
  class_list=BIRD_NAMES_COLUMBIA_COSTA_RICA,
 
 
 
227
  ),
228
  BirdSetConfig(
229
  name="NES_xc",
@@ -231,6 +299,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
231
  citation=_COLUMBIA_COSTA_RICA_CITATION,
232
  data_dir=f"{base_url}/NES",
233
  class_list=BIRD_NAMES_COLUMBIA_COSTA_RICA,
 
 
 
234
  ),
235
  BirdSetConfig(
236
  name="NES_scape",
@@ -238,6 +309,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
238
  citation=_COLUMBIA_COSTA_RICA_CITATION,
239
  data_dir=f"{base_url}/NES",
240
  class_list=BIRD_NAMES_COLUMBIA_COSTA_RICA,
 
 
 
241
  ),
242
  BirdSetConfig(
243
  name="NBP",
@@ -245,6 +319,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
245
  citation=_NIPS4BPLUS_CITATION,
246
  data_dir=f"{base_url}/NBP",
247
  class_list=BIRD_NAMES_NIPS4BPLUS,
 
 
 
248
  ),
249
  BirdSetConfig(
250
  name="NBP_xc",
@@ -252,6 +329,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
252
  citation=_NIPS4BPLUS_CITATION,
253
  data_dir=f"{base_url}/NBP",
254
  class_list=BIRD_NAMES_NIPS4BPLUS,
 
 
 
255
  ),
256
  BirdSetConfig(
257
  name="NBP_scape",
@@ -259,6 +339,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
259
  citation=_NIPS4BPLUS_CITATION,
260
  data_dir=f"{base_url}/NBP",
261
  class_list=BIRD_NAMES_NIPS4BPLUS,
 
 
 
262
  ),
263
  BirdSetConfig(
264
  name="XCM",
@@ -266,6 +349,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
266
  citation="TODO",
267
  data_dir=f"{base_url}/XCM",
268
  class_list=BIRD_NAMES_XENOCANTO_M,
 
 
 
269
  ),
270
  BirdSetConfig(
271
  name="XCL",
@@ -273,6 +359,9 @@ class BirdSet(datasets.GeneratorBasedBuilder):
273
  citation="TODO",
274
  data_dir=f"{base_url}/XCL",
275
  class_list=BIRD_NAMES_XENOCANTO,
 
 
 
276
  ),
277
  ]
278
 
@@ -445,7 +534,6 @@ class BirdSet(datasets.GeneratorBasedBuilder):
445
  "low_freq": row["low_freq"],
446
  "high_freq": row["high_freq"],
447
  "ebird_code": row["ebird_code"] if split != "test_multilabel" else None,
448
- #"ebird_code_multilabel": row.get("ebird_code_multilabel", None),
449
  "ebird_code_multilabel": row.get("ebird_code_multilabel", None) if "no_call" not in row.get("ebird_code_multilabel", []) else [],
450
  "ebird_code_secondary": row.get("ebird_code_secondary", None),
451
  "call_type": row["call_type"],
@@ -461,5 +549,11 @@ class BirdSet(datasets.GeneratorBasedBuilder):
461
  "event_cluster": row.get("event_cluster", None),
462
  "peaks": row.get("peaks", None),
463
  "quality": row.get("quality", None),
464
- "recordist": row.get("recordist", None)
 
 
 
 
 
 
465
  }
 
22
  BIRD_NAMES_HIGH_SIERRAS, BIRD_NAMES_SIERRA_NEVADA, BIRD_NAMES_POWDERMILL_NATURE, BIRD_NAMES_SAPSUCKER, \
23
  BIRD_NAMES_COLUMBIA_COSTA_RICA, BIRD_NAMES_XENOCANTO, BIRD_NAMES_XENOCANTO_M
24
 
25
+ from . import classes
26
+
27
  from .descriptions import _BIRD_DB_CITATION, _NIPS4BPLUS_CITATION, _NIPS4BPLUS_DESCRIPTION, \
28
  _HIGH_SIERRAS_DESCRIPTION, _HIGH_SIERRAS_CITATION, _SIERRA_NEVADA_DESCRIPTION, _SIERRA_NEVADA_CITATION, \
29
  _POWDERMILL_NATURE_DESCRIPTION, _POWDERMILL_NATURE_CITATION, _AMAZON_BASIN_DESCRIPTION, _AMAZON_BASIN_CITATION, \
 
32
 
33
  #############################################
34
  _BIRDSET_CITATION = """\
35
+ @article{birdset,
36
  title = {BirdSet: A Multi-Task Benchmark For Avian Diversity Monitoring},
37
+ author={anonymous},
38
  year={2024}
39
  }
40
  """
 
46
  contained dataset.
47
  """
48
 
49
+ base_url = "https://huggingface.co/datasets/anonymous-birder/BirdSet/resolve/data"
50
+ base_url = "/mnt/work/bird2vec/data/huggingface_hub/gadme/data"
51
 
52
  class BirdSetConfig(datasets.BuilderConfig):
53
  def __init__(
 
55
  name,
56
  citation,
57
  class_list,
58
+ genus_list,
59
+ species_group_list,
60
+ order_list,
61
  **kwargs):
62
  super().__init__(version=datasets.Version("0.0.2"), name=name, **kwargs)
63
 
 
85
  "peaks": datasets.Sequence(datasets.Value("float64")),
86
  "quality": datasets.Value("string"),
87
  "recordist": datasets.Value("string"),
88
+ "genus": datasets.ClassLabel(names=genus_list),
89
+ "species_group": datasets.ClassLabel(names=species_group_list),
90
+ "order": datasets.ClassLabel(names=order_list),
91
+ "genus_multilabel": datasets.Sequence(datasets.ClassLabel(names=genus_list)),
92
+ "species_group_multilabel": datasets.Sequence(datasets.ClassLabel(names=species_group_list)),
93
+ "order_multilabel": datasets.Sequence(datasets.ClassLabel(names=order_list)),
94
  })
95
 
96
  self.features = features
 
109
  citation=_SAPSUCKER_WOODS_CITATION,
110
  data_dir=f"{base_url}/SSW",
111
  class_list=BIRD_NAMES_SAPSUCKER,
112
+ genus_list=classes.GENUS_SSW,
113
+ species_group_list=classes.SPECIES_GROUP_SSW,
114
+ order_list=classes.ORDER_SSW,
115
  ),
116
  BirdSetConfig(
117
  name="SSW_xc",
 
119
  citation=_SAPSUCKER_WOODS_CITATION,
120
  data_dir=f"{base_url}/SSW",
121
  class_list=BIRD_NAMES_SAPSUCKER,
122
+ genus_list=classes.GENUS_SSW,
123
+ species_group_list=classes.SPECIES_GROUP_SSW,
124
+ order_list=classes.ORDER_SSW,
125
  ),
126
  BirdSetConfig(
127
  name="SSW_scape",
 
129
  citation=_SAPSUCKER_WOODS_CITATION,
130
  data_dir=f"{base_url}/SSW",
131
  class_list=BIRD_NAMES_SAPSUCKER,
132
+ genus_list=classes.GENUS_SSW,
133
+ species_group_list=classes.SPECIES_GROUP_SSW,
134
+ order_list=classes.ORDER_SSW,
135
  ),
136
  BirdSetConfig(
137
  name="PER",
 
139
  citation=_AMAZON_BASIN_CITATION,
140
  data_dir=f"{base_url}/PER",
141
  class_list=BIRD_NAMES_AMAZON_BASIN,
142
+ genus_list=classes.GENUS_PER,
143
+ species_group_list=classes.SPECIES_GROUP_PER,
144
+ order_list=classes.ORDER_PER,
145
  ),
146
  BirdSetConfig(
147
  name="PER_xc",
 
149
  citation=_AMAZON_BASIN_CITATION,
150
  data_dir=f"{base_url}/PER",
151
  class_list=BIRD_NAMES_AMAZON_BASIN,
152
+ genus_list=classes.GENUS_PER,
153
+ species_group_list=classes.SPECIES_GROUP_PER,
154
+ order_list=classes.ORDER_PER,
155
  ),
156
  BirdSetConfig(
157
  name="PER_scape",
 
159
  citation=_AMAZON_BASIN_CITATION,
160
  data_dir=f"{base_url}/PER",
161
  class_list=BIRD_NAMES_AMAZON_BASIN,
162
+ genus_list=classes.GENUS_PER,
163
+ species_group_list=classes.SPECIES_GROUP_PER,
164
+ order_list=classes.ORDER_PER,
165
  ),
166
  BirdSetConfig(
167
  name="UHH",
 
169
  citation=_HAWAIIAN_ISLANDS_CITATION,
170
  data_dir=f"{base_url}/UHH",
171
  class_list=BIRD_NAMES_HAWAII,
172
+ genus_list=classes.GENUS_UHH,
173
+ species_group_list=classes.SPECIES_GROUP_UHH,
174
+ order_list=classes.ORDER_UHH,
175
  ),
176
  BirdSetConfig(
177
  name="UHH_xc",
 
179
  citation=_HAWAIIAN_ISLANDS_CITATION,
180
  data_dir=f"{base_url}/UHH",
181
  class_list=BIRD_NAMES_HAWAII,
182
+ genus_list=classes.GENUS_UHH,
183
+ species_group_list=classes.SPECIES_GROUP_UHH,
184
+ order_list=classes.ORDER_UHH,
185
  ),
186
  BirdSetConfig(
187
  name="UHH_scape",
 
189
  citation=_HAWAIIAN_ISLANDS_CITATION,
190
  data_dir=f"{base_url}/UHH",
191
  class_list=BIRD_NAMES_HAWAII,
192
+ genus_list=classes.GENUS_UHH,
193
+ species_group_list=classes.SPECIES_GROUP_UHH,
194
+ order_list=classes.ORDER_UHH,
195
  ),
196
  BirdSetConfig(
197
  name="SNE",
 
199
  citation=_SIERRA_NEVADA_CITATION,
200
  data_dir=f"{base_url}/SNE",
201
  class_list=BIRD_NAMES_SIERRA_NEVADA,
202
+ genus_list=classes.GENUS_SNE,
203
+ species_group_list=classes.SPECIES_GROUP_SNE,
204
+ order_list=classes.ORDER_SNE,
205
  ),
206
  BirdSetConfig(
207
  name="SNE_xc",
 
209
  citation=_SIERRA_NEVADA_CITATION,
210
  data_dir=f"{base_url}/SNE",
211
  class_list=BIRD_NAMES_SIERRA_NEVADA,
212
+ genus_list=classes.GENUS_SNE,
213
+ species_group_list=classes.SPECIES_GROUP_SNE,
214
+ order_list=classes.ORDER_SNE,
215
  ),
216
  BirdSetConfig(
217
  name="SNE_scape",
 
219
  citation=_SIERRA_NEVADA_CITATION,
220
  data_dir=f"{base_url}/SNE",
221
  class_list=BIRD_NAMES_SIERRA_NEVADA,
222
+ genus_list=classes.GENUS_SNE,
223
+ species_group_list=classes.SPECIES_GROUP_SNE,
224
+ order_list=classes.ORDER_SNE,
225
  ),
226
  BirdSetConfig(
227
  name="POW",
 
229
  citation=_POWDERMILL_NATURE_CITATION,
230
  data_dir=f"{base_url}/POW",
231
  class_list=BIRD_NAMES_POWDERMILL_NATURE,
232
+ genus_list=classes.GENUS_POW,
233
+ species_group_list=classes.SPECIES_GROUP_POW,
234
+ order_list=classes.ORDER_POW,
235
  ),
236
  BirdSetConfig(
237
  name="POW_xc",
 
239
  citation=_POWDERMILL_NATURE_CITATION,
240
  data_dir=f"{base_url}/POW",
241
  class_list=BIRD_NAMES_POWDERMILL_NATURE,
242
+ genus_list=classes.GENUS_POW,
243
+ species_group_list=classes.SPECIES_GROUP_POW,
244
+ order_list=classes.ORDER_POW,
245
  ),
246
  BirdSetConfig(
247
  name="POW_scape",
 
249
  citation=_POWDERMILL_NATURE_CITATION,
250
  data_dir=f"{base_url}/POW",
251
  class_list=BIRD_NAMES_POWDERMILL_NATURE,
252
+ genus_list=classes.GENUS_POW,
253
+ species_group_list=classes.SPECIES_GROUP_POW,
254
+ order_list=classes.ORDER_POW,
255
  ),
256
  BirdSetConfig(
257
  name="HSN",
 
259
  citation=_HIGH_SIERRAS_CITATION,
260
  data_dir=f"{base_url}/HSN",
261
  class_list=BIRD_NAMES_HIGH_SIERRAS,
262
+ genus_list=classes.GENUS_HSN,
263
+ species_group_list=classes.SPECIES_GROUP_HSN,
264
+ order_list=classes.ORDER_HSN,
265
  ),
266
  BirdSetConfig(
267
  name="HSN_xc",
 
269
  citation=_HIGH_SIERRAS_CITATION,
270
  data_dir=f"{base_url}/HSN",
271
  class_list=BIRD_NAMES_HIGH_SIERRAS,
272
+ genus_list=classes.GENUS_HSN,
273
+ species_group_list=classes.SPECIES_GROUP_HSN,
274
+ order_list=classes.ORDER_HSN,
275
  ),
276
  BirdSetConfig(
277
  name="HSN_scape",
 
279
  citation=_HIGH_SIERRAS_CITATION,
280
  data_dir=f"{base_url}/HSN",
281
  class_list=BIRD_NAMES_HIGH_SIERRAS,
282
+ genus_list=classes.GENUS_HSN,
283
+ species_group_list=classes.SPECIES_GROUP_HSN,
284
+ order_list=classes.ORDER_HSN,
285
  ),
286
  BirdSetConfig(
287
  name="NES",
 
289
  citation=_COLUMBIA_COSTA_RICA_CITATION,
290
  data_dir=f"{base_url}/NES",
291
  class_list=BIRD_NAMES_COLUMBIA_COSTA_RICA,
292
+ genus_list=classes.GENUS_NES,
293
+ species_group_list=classes.SPECIES_GROUP_NES,
294
+ order_list=classes.ORDER_NES,
295
  ),
296
  BirdSetConfig(
297
  name="NES_xc",
 
299
  citation=_COLUMBIA_COSTA_RICA_CITATION,
300
  data_dir=f"{base_url}/NES",
301
  class_list=BIRD_NAMES_COLUMBIA_COSTA_RICA,
302
+ genus_list=classes.GENUS_NES,
303
+ species_group_list=classes.SPECIES_GROUP_NES,
304
+ order_list=classes.ORDER_NES,
305
  ),
306
  BirdSetConfig(
307
  name="NES_scape",
 
309
  citation=_COLUMBIA_COSTA_RICA_CITATION,
310
  data_dir=f"{base_url}/NES",
311
  class_list=BIRD_NAMES_COLUMBIA_COSTA_RICA,
312
+ genus_list=classes.GENUS_NES,
313
+ species_group_list=classes.SPECIES_GROUP_NES,
314
+ order_list=classes.ORDER_NES,
315
  ),
316
  BirdSetConfig(
317
  name="NBP",
 
319
  citation=_NIPS4BPLUS_CITATION,
320
  data_dir=f"{base_url}/NBP",
321
  class_list=BIRD_NAMES_NIPS4BPLUS,
322
+ genus_list=classes.GENUS_NBP,
323
+ species_group_list=classes.SPECIES_GROUP_NBP,
324
+ order_list=classes.ORDER_NBP,
325
  ),
326
  BirdSetConfig(
327
  name="NBP_xc",
 
329
  citation=_NIPS4BPLUS_CITATION,
330
  data_dir=f"{base_url}/NBP",
331
  class_list=BIRD_NAMES_NIPS4BPLUS,
332
+ genus_list=classes.GENUS_NBP,
333
+ species_group_list=classes.SPECIES_GROUP_NBP,
334
+ order_list=classes.ORDER_NBP,
335
  ),
336
  BirdSetConfig(
337
  name="NBP_scape",
 
339
  citation=_NIPS4BPLUS_CITATION,
340
  data_dir=f"{base_url}/NBP",
341
  class_list=BIRD_NAMES_NIPS4BPLUS,
342
+ genus_list=classes.GENUS_NBP,
343
+ species_group_list=classes.SPECIES_GROUP_NBP,
344
+ order_list=classes.ORDER_NBP,
345
  ),
346
  BirdSetConfig(
347
  name="XCM",
 
349
  citation="TODO",
350
  data_dir=f"{base_url}/XCM",
351
  class_list=BIRD_NAMES_XENOCANTO_M,
352
+ genus_list=classes.GENUS_XCM,
353
+ species_group_list=classes.SPECIES_GROUP_XCM,
354
+ order_list=classes.ORDER_XCM,
355
  ),
356
  BirdSetConfig(
357
  name="XCL",
 
359
  citation="TODO",
360
  data_dir=f"{base_url}/XCL",
361
  class_list=BIRD_NAMES_XENOCANTO,
362
+ genus_list=classes.GENUS_XCL,
363
+ species_group_list=classes.SPECIES_GROUP_XCL,
364
+ order_list=classes.ORDER_XCL,
365
  ),
366
  ]
367
 
 
534
  "low_freq": row["low_freq"],
535
  "high_freq": row["high_freq"],
536
  "ebird_code": row["ebird_code"] if split != "test_multilabel" else None,
 
537
  "ebird_code_multilabel": row.get("ebird_code_multilabel", None) if "no_call" not in row.get("ebird_code_multilabel", []) else [],
538
  "ebird_code_secondary": row.get("ebird_code_secondary", None),
539
  "call_type": row["call_type"],
 
549
  "event_cluster": row.get("event_cluster", None),
550
  "peaks": row.get("peaks", None),
551
  "quality": row.get("quality", None),
552
+ "recordist": row.get("recordist", None),
553
+ "genus": row["genus"] if split != "test_multilabel" else None,
554
+ "species_group": row["species_group"] if split != "test_multilabel" else None,
555
+ "order": row["order"] if split != "test_multilabel" else None,
556
+ "genus_multilabel": row.get("genus_multilabel", []) if split == "test_multilabel" else None,
557
+ "species_group_multilabel": row.get("species_group_multilabel", []) if split == "test_multilabel" else None,
558
+ "order_multilabel": row.get("order_multilabel", []) if split == "test_multilabel" else None,
559
  }