ctheodoris
/

Geneformer

Inference Endpoints

Model card Files Files and versions Community

Geneformer / examples

14 contributors

History: 38 commits

madhavanvenkatesh's picture

madhavanvenkatesh

test pr for notebook rendering

e9d4457 verified about 2 months ago

pretraining_new_model
precommit formatting 3 months ago
cell_classification.ipynb

106 kB

add option for hyperparameter tuning to cc.validate 7 months ago
cell_classification_test_pr.ipynb

106 kB

test pr for notebook rendering about 2 months ago
extract_and_plot_cell_embeddings.ipynb

1.13 MB

Add classifier module and examples 8 months ago
gene_classification.ipynb

180 kB

Add classifier module and examples 8 months ago
in_silico_perturbation.ipynb

5.06 kB

Add functions for extracting gene embeddings, move state_embs_dict outside isp, fix bugs in isp 12 months ago
tokenizing_scRNAseq_data.ipynb

4.01 kB

add input size tip to instructions about 2 months ago