Geneformer / geneformer /emb_extractor.py

Commit History

Add memory-efficient method for computing emb summary statistics
6caf480

Christina Theodoris commited on

Fixed error with perturbing individual genes and updated ways to specify cell_states_to_model (#146)
9169bfd

ctheodoris davidjwen commited on

Add error message for "gene" embedding extraction under development.
65b4915

Christina Theodoris commited on

Rename heatmap legend to be correct label
badcca6

Christina Theodoris commited on

Add function to extract and plot cell embeddings
d154fee

Christina Theodoris commited on