Commit History
Add sorting for aggregating data for goal state shifts
50e921d
Christina Theodoris
commited on
Update isp to allow modeling single perturbation in multiple cells as batches
acd253c
Christina Theodoris
commited on
Correct order of state dict in in silico perturber stats and tensor dims of alt state emb in in silico perturber
3d06203
Christina Theodoris
commited on
Add explanation of output columns and sort by largest shift
3072225
Christina Theodoris
commited on
Modify documentation for modeling only 2 cell states
019165f
Christina Theodoris
commited on
Add instructions for modeling only 2 states and modify stats script for that option
912860d
Christina Theodoris
commited on
Add mixture model option for gene-gene interaction stats
dc1481d
Christina Theodoris
commited on
Add stats with mixture model to determine whether test perturbation is in impact component
d20ad0a
Christina Theodoris
commited on
Fixes to stats and adding gene dict attempt number 2 (#13)
42e9bf9
ctheodoris
commited on
Rename isp stats methods to clarify mode.
188029e
ctheodoris
commited on
Reorder/sort isp stats output in vs_null mode
f4fea1e
ctheodoris
commited on
add in silico perturbation module
efec1c4
Christina Theodoris
commited on