Geneformer / geneformer /emb_extractor.py

Commit History

Fix isp perturb_group dims, reformat cell states dict to keyed, add attn mask
c2679c4

Christina Theodoris commited on

Add error message for "gene" embedding extraction under development.
65b4915

Christina Theodoris commited on

Rename heatmap legend to be correct label
badcca6

Christina Theodoris commited on

Add function to extract and plot cell embeddings
d154fee

Christina Theodoris commited on