Update internal format of anchor token to list for consistency with genes to perturb b36d210 Christina Theodoris commited on Jul 10, 2023
Add filtering for start state cells prior to in silico perturbation when modeling cell states bb217cf Christina Theodoris commited on Jul 9, 2023
Correct order of state dict in in silico perturber stats and tensor dims of alt state emb in in silico perturber 3d06203 Christina Theodoris commited on Jul 8, 2023
Modify quant_layers to convert layer nums to integers before calculating max 2181aa4 Christina Theodoris commited on Jul 3, 2023
Modify documentation for modeling only 2 cell states 019165f Christina Theodoris commited on Jun 27, 2023
Add instructions for modeling only 2 states and modify stats script for that option 912860d Christina Theodoris commited on Jun 27, 2023
Add function to create remainder emb for in silico overexpression batch feeecd0 Christina Theodoris commited on Jun 23, 2023
Fix filter_data to allow value of None for no filtering 5fcf2b8 Christina Theodoris commited on Jun 15, 2023