Geneformer / geneformer /perturber_utils.py

Commit History

precommit formatting
f07bfd7

ctheodoris commited on

update with 12L and 20L i4096 gc95M models, multitask and quantiz code
933ca80

ctheodoris commited on

move dicts to init
ea428cb

ctheodoris commited on

fix cell state gene embeddings bug (#345)
c0e7b19
verified

ctheodoris commited on

add load model for train and fix validate anchor gene error
0d675a3

Christina Theodoris commited on

update dependencies, reinstate compatibility with python<3.9 with typing for List
10d3f10

Christina Theodoris commited on

Add functions for extracting gene embeddings, move state_embs_dict outside isp, fix bugs in isp
2f25aea

Christina Theodoris commited on