Geneformer / examples /extract_and_plot_cell_embeddings.ipynb

Commit History

Add classifier module and examples
9e9cca9

Christina Theodoris commited on

Add option to output embs as tensor
624349c

Christina Theodoris commited on

Fixed error with perturbing individual genes and updated ways to specify cell_states_to_model (#146)
9169bfd

ctheodoris davidjwen commited on

Rename heatmap legend to be correct label
badcca6

Christina Theodoris commited on

Add function to extract and plot cell embeddings
d154fee

Christina Theodoris commited on