Geneformer / geneformer /perturber_utils.py

Commit History

added quality of life improvements; fixed gene similarities with cell_states_to_model
4b4547f

David Wen commited on

add load model for train and fix validate anchor gene error
0d675a3

Christina Theodoris commited on

update dependencies, reinstate compatibility with python<3.9 with typing for List
10d3f10

Christina Theodoris commited on

Add functions for extracting gene embeddings, move state_embs_dict outside isp, fix bugs in isp
2f25aea

Christina Theodoris commited on