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metrics.json

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+{"loss": 0.09177067130804062, "alias": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 32}, "cen17_copiescell": {"precision": 0.8, "recall": 0.8, "f1": 0.8, "number": 5}, "ck19": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 8}, "dcis": {"precision": 0.8667, "recall": 0.8667, "f1": 0.8667, "number": 15}, "determination_date": {"precision": 0.0, "recall": 0.0, "f1": 0.0, "number": 1}, "elston_ellis_grading": {"precision": 0.9167, "recall": 1.0, "f1": 0.9565, "number": 11}, "entry_date": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 22}, "estrogen_ihc": {"precision": 0.9333, "recall": 1.0, "f1": 0.9655, "number": 14}, "estrogen_ihc_clone": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 5}, "estrogen_ihc_result": {"precision": 0.875, "recall": 0.9333, "f1": 0.9032, "number": 15}, "her2_copiescell": {"precision": 0.8333, "recall": 0.8333, "f1": 0.8333, "number": 6}, "her2_final_result": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 5}, "her2_ihc_clone": {"precision": 0.7143, "recall": 1.0, "f1": 0.8333, "number": 5}, "her2_ihc_result": {"precision": 0.6471, "recall": 0.9167, "f1": 0.7586, "number": 12}, "her2_in_situ_hydration_kit": {"precision": 0.5833, "recall": 0.7778, "f1": 0.6667, "number": 9}, "her2_interpretation_guide": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 18}, "her2cen17_ratio": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 6}, "histological_grade": {"precision": 0.9524, "recall": 1.0, "f1": 0.9756, "number": 20}, "histological_type": {"precision": 0.8696, "recall": 0.8, "f1": 0.8333, "number": 25}, "ki67_expression": {"precision": 0.875, "recall": 1.0, "f1": 0.9333, "number": 21}, "ki67_ihc_clone": {"precision": 0.9167, "recall": 1.0, "f1": 0.9565, "number": 11}, "laterality": {"precision": 0.7143, "recall": 0.9615, "f1": 0.8197, "number": 26}, "metastatic": {"precision": 0.7143, "recall": 0.4545, "f1": 0.5556, "number": 11}, "metastatic_tissue": {"precision": 0.8, "recall": 0.4, "f1": 0.5333, "number": 10}, "patient_number": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 16}, "pd_l1_cps": {"precision": 0.0, "recall": 0.0, "f1": 0.0, "number": 2}, "pd_l1_cps_clone": {"precision": 0.0, "recall": 0.0, "f1": 0.0, "number": 2}, "pd_l1_ihc_platform": {"precision": 0.0, "recall": 0.0, "f1": 0.0, "number": 1}, "primary_tumor_site": {"precision": 0.0, "recall": 0.0, "f1": 0.0, "number": 4}, "progesterone_ihc": {"precision": 0.8235, "recall": 0.9333, "f1": 0.875, "number": 15}, "progesterone_ihc_clone": {"precision": 1.0, "recall": 0.875, "f1": 0.9333, "number": 8}, "progesterone_ihc_result": {"precision": 1.0, "recall": 0.9333, "f1": 0.9655, "number": 15}, "result_ish_her2": {"precision": 0.6667, "recall": 0.8, "f1": 0.7273, "number": 5}, "sample_date": {"precision": 0.8, "recall": 1.0, "f1": 0.8889, "number": 4}, "sample_type": {"precision": 0.7097, "recall": 0.7857, "f1": 0.7458, "number": 28}, "size": {"precision": 0.7143, "recall": 0.75, "f1": 0.7317, "number": 20}, "snomed": {"precision": 0.8, "recall": 0.8, "f1": 0.8, "number": 5}, "tils": {"precision": 0.8182, "recall": 0.9, "f1": 0.8571, "number": 10}, "tnm_stage": {"precision": 0.75, "recall": 0.7895, "f1": 0.7692, "number": 19}, "tumoral_cell": {"precision": 0.6667, "recall": 1.0, "f1": 0.8, "number": 2}, "validation_date": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 9}, "overall_precision": 0.854, "overall_recall": 0.8808, "overall_f1": 0.8671, "overall_accuracy": 0.987, "runtime": 16.4161, "samples_per_second": 2.985, "steps_per_second": 2.985, "epoch": 20.0}

training_data_insights.json

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+{"alias": {"Total": 271, "Used": 271, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 32}}, "patient_number": {"Total": 132, "Used": 132, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 16}}, "entry_date": {"Total": 177, "Used": 177, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 22}}, "sample_type": {"Total": 267, "Used": 271, "Metrics": {"precision": 0.7097, "recall": 0.7857, "f1": 0.7458, "number": 28}}, "laterality": {"Total": 244, "Used": 249, "Metrics": {"precision": 0.7143, "recall": 0.9615, "f1": 0.8197, "number": 26}}, "histological_type": {"Total": 238, "Used": 240, "Metrics": {"precision": 0.8696, "recall": 0.8, "f1": 0.8333, "number": 25}}, "histological_grade": {"Total": 185, "Used": 189, "Metrics": {"precision": 0.9524, "recall": 1.0, "f1": 0.9756, "number": 20}}, "estrogen_ihc_result": {"Total": 145, "Used": 148, "Metrics": {"precision": 0.875, "recall": 0.9333, "f1": 0.9032, "number": 15}}, "estrogen_ihc": {"Total": 161, "Used": 168, "Metrics": {"precision": 0.9333, "recall": 1.0, "f1": 0.9655, "number": 14}}, "progesterone_ihc_result": {"Total": 161, "Used": 169, "Metrics": {"precision": 1.0, "recall": 0.9333, "f1": 0.9655, "number": 15}}, "progesterone_ihc": {"Total": 145, "Used": 150, "Metrics": {"precision": 0.8235, "recall": 0.9333, "f1": 0.875, "number": 15}}, "ki67_ihc_clone": {"Total": 104, "Used": 106, "Metrics": {"precision": 0.9167, "recall": 1.0, "f1": 0.9565, "number": 11}}, "ki67_expression": {"Total": 224, "Used": 232, "Metrics": {"precision": 0.875, "recall": 1.0, "f1": 0.9333, "number": 21}}, "her2_ihc_clone": {"Total": 61, "Used": 61, "Metrics": {"precision": 0.7143, "recall": 1.0, "f1": 0.8333, "number": 5}}, "her2_ihc_result": {"Total": 128, "Used": 129, "Metrics": {"precision": 0.6471, "recall": 0.9167, "f1": 0.7586, "number": 12}}, "her2_in_situ_hydration_kit": {"Total": 95, "Used": 99, "Metrics": {"precision": 0.5833, "recall": 0.7778, "f1": 0.6667, "number": 9}}, "result_ish_her2": {"Total": 26, "Used": 27, "Metrics": {"precision": 0.6667, "recall": 0.8, "f1": 0.7273, "number": 5}}, "e_cadherina": {"Total": 2, "Used": 2, "Metrics": {}}, "primary_tumor_site": {"Total": 33, "Used": 34, "Metrics": {"precision": 0.0, "recall": 0.0, "f1": 0.0, "number": 4}}, "ck19": {"Total": 109, "Used": 114, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 8}}, "metastatic": {"Total": 51, "Used": 53, "Metrics": {"precision": 0.7143, "recall": 0.4545, "f1": 0.5556, "number": 11}}, "metastatic_tissue": {"Total": 35, "Used": 36, "Metrics": {"precision": 0.8, "recall": 0.4, "f1": 0.5333, "number": 10}}, "tnm_stage": {"Total": 141, "Used": 141, "Metrics": {"precision": 0.75, "recall": 0.7895, "f1": 0.7692, "number": 19}}, "sample_date": {"Total": 32, "Used": 32, "Metrics": {"precision": 0.8, "recall": 1.0, "f1": 0.8889, "number": 4}}, "determination_date": {"Total": 2, "Used": 2, "Metrics": {"precision": 0.0, "recall": 0.0, "f1": 0.0, "number": 1}}, "dcis": {"Total": 141, "Used": 143, "Metrics": {"precision": 0.8667, "recall": 0.8667, "f1": 0.8667, "number": 15}}, "androgen_ihc_result": {"Total": 2, "Used": 2, "Metrics": {}}, "androgen_ihc": {"Total": 1, "Used": 1, "Metrics": {}}, "her2cen17_ratio": {"Total": 31, "Used": 33, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 6}}, "her2_copiescell": {"Total": 30, "Used": 31, "Metrics": {"precision": 0.8333, "recall": 0.8333, "f1": 0.8333, "number": 6}}, "tils": {"Total": 84, "Used": 84, "Metrics": {"precision": 0.8182, "recall": 0.9, "f1": 0.8571, "number": 10}}, "size": {"Total": 172, "Used": 175, "Metrics": {"precision": 0.7143, "recall": 0.75, "f1": 0.7317, "number": 20}}, "her2_interpretation_guide": {"Total": 149, "Used": 156, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 18}}, "estrogen_ihc_clone": {"Total": 84, "Used": 84, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 5}}, "progesterone_ihc_clone": {"Total": 76, "Used": 78, "Metrics": {"precision": 1.0, "recall": 0.875, "f1": 0.9333, "number": 8}}, "validation_date": {"Total": 79, "Used": 79, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 9}}, "elston_ellis_grading": {"Total": 128, "Used": 131, "Metrics": {"precision": 0.9167, "recall": 1.0, "f1": 0.9565, "number": 11}}, "pd_l1_clone": {"Total": 2, "Used": 2, "Metrics": {}}, "pd_l1_cps": {"Total": 2, "Used": 2, "Metrics": {"precision": 0.0, "recall": 0.0, "f1": 0.0, "number": 2}}, "pd_l1_cps_result": {"Total": 2, "Used": 2, "Metrics": {}}, "cen17_copiescell": {"Total": 24, "Used": 24, "Metrics": {"precision": 0.8, "recall": 0.8, "f1": 0.8, "number": 5}}, "origin": {"Total": 1, "Used": 1, "Metrics": {}}, "her2_staining": {"Total": 1, "Used": 1, "Metrics": {}}, "her2_final_result": {"Total": 30, "Used": 30, "Metrics": {"precision": 1.0, "recall": 1.0, "f1": 1.0, "number": 5}}, "tumoral_cell": {"Total": 15, "Used": 15, "Metrics": {"precision": 0.6667, "recall": 1.0, "f1": 0.8, "number": 2}}, "egfr_ihc_clone": {"Total": 1, "Used": 1, "Metrics": {}}, "snomed": {"Total": 45, "Used": 45, "Metrics": {"precision": 0.8, "recall": 0.8, "f1": 0.8, "number": 5}}, "subtype_lung": {"Total": 1, "Used": 1, "Metrics": {}}}